BLASTX nr result

ID: Coptis21_contig00011765 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011765
         (294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315117.1| predicted protein [Populus trichocarpa] gi|2...   120   2e-25
ref|XP_002888408.1| hypothetical protein ARALYDRAFT_894096 [Arab...   119   3e-25
ref|XP_002312201.1| predicted protein [Populus trichocarpa] gi|2...   115   4e-24
ref|XP_002514795.1| Protein ariadne-1, putative [Ricinus communi...   114   6e-24
ref|XP_003541178.1| PREDICTED: probable E3 ubiquitin-protein lig...   113   1e-23

>ref|XP_002315117.1| predicted protein [Populus trichocarpa] gi|222864157|gb|EEF01288.1|
           predicted protein [Populus trichocarpa]
          Length = 591

 Score =  120 bits (300), Expect = 2e-25
 Identities = 56/106 (52%), Positives = 70/106 (66%), Gaps = 9/106 (8%)
 Frame = +1

Query: 1   SMARAGILLSNYNWCITNAQEAWFSNEETVRKTLGLLEEPVVYCPDDLEGTCTICFESHD 180
           S   A ILL  YNW ++   + WF++EE VRK +GLLEEPVV  PD  E TC ICFE++ 
Sbjct: 88  SKVAASILLRYYNWSVSKVHDEWFADEEKVRKAVGLLEEPVVPFPDGREMTCGICFETYP 147

Query: 181 CKAMYAASCGHLFCGS---------INDGPGCLKMRCPDPTCSAAL 291
              + AA+CGH FC S         INDGPGCL +RCPDP+C+AA+
Sbjct: 148 SDRLLAAACGHPFCNSCWAGYISTAINDGPGCLMLRCPDPSCNAAI 193


>ref|XP_002888408.1| hypothetical protein ARALYDRAFT_894096 [Arabidopsis lyrata subsp.
           lyrata] gi|297334249|gb|EFH64667.1| hypothetical protein
           ARALYDRAFT_894096 [Arabidopsis lyrata subsp. lyrata]
          Length = 567

 Score =  119 bits (297), Expect = 3e-25
 Identities = 54/102 (52%), Positives = 69/102 (67%), Gaps = 9/102 (8%)
 Frame = +1

Query: 13  AGILLSNYNWCITNAQEAWFSNEETVRKTLGLLEEPVVYCPDDLEGTCTICFESHDCKAM 192
           + ILL +YNWC++   + WF++EE VR  +GLLE+PVV  P D E  C ICFE+  C  +
Sbjct: 81  SAILLRHYNWCVSRVHDEWFADEEKVRDAVGLLEKPVVDFPTDGELECGICFEAFLCDKL 140

Query: 193 YAASCGHLFCGS---------INDGPGCLKMRCPDPTCSAAL 291
           YAA+CGH FC S         INDGPGCL +RCPDP+C AA+
Sbjct: 141 YAAACGHPFCDSCWEGYITTAINDGPGCLTLRCPDPSCRAAV 182


>ref|XP_002312201.1| predicted protein [Populus trichocarpa] gi|222852021|gb|EEE89568.1|
           predicted protein [Populus trichocarpa]
          Length = 591

 Score =  115 bits (288), Expect = 4e-24
 Identities = 54/106 (50%), Positives = 68/106 (64%), Gaps = 9/106 (8%)
 Frame = +1

Query: 1   SMARAGILLSNYNWCITNAQEAWFSNEETVRKTLGLLEEPVVYCPDDLEGTCTICFESHD 180
           S   A ILL  YNW ++   + WF++EE VR+ +GLLEEPVV  PD  E TC ICFE++ 
Sbjct: 88  SKVAATILLRYYNWSVSKVHDEWFADEEKVRRAVGLLEEPVVPFPDGREMTCGICFETYP 147

Query: 181 CKAMYAASCGHLFCGS---------INDGPGCLKMRCPDPTCSAAL 291
              + A  CGH FC S         INDGPGCL +RCPDP+C+AA+
Sbjct: 148 SDRLRAVVCGHAFCNSCWAGYISTAINDGPGCLMLRCPDPSCNAAV 193


>ref|XP_002514795.1| Protein ariadne-1, putative [Ricinus communis]
           gi|223545846|gb|EEF47349.1| Protein ariadne-1, putative
           [Ricinus communis]
          Length = 513

 Score =  114 bits (286), Expect = 6e-24
 Identities = 54/106 (50%), Positives = 70/106 (66%), Gaps = 9/106 (8%)
 Frame = +1

Query: 1   SMARAGILLSNYNWCITNAQEAWFSNEETVRKTLGLLEEPVVYCPDDLEGTCTICFESHD 180
           S   A ILL  YNW ++   + WF++E+ VR+ +GLLE+PVV  PD  E TC ICFE++ 
Sbjct: 10  SKVAATILLRYYNWSVSKVHDEWFADEDKVRRAVGLLEKPVVEFPDGREMTCGICFETYP 69

Query: 181 CKAMYAASCGHLFCGS---------INDGPGCLKMRCPDPTCSAAL 291
              + AA+CGH FC S         INDGPGCL +RCPDP+CSAA+
Sbjct: 70  SDRLRAAACGHPFCISCWQGYISTAINDGPGCLMLRCPDPSCSAAV 115


>ref|XP_003541178.1| PREDICTED: probable E3 ubiquitin-protein ligase ARI7-like [Glycine
           max]
          Length = 586

 Score =  113 bits (283), Expect = 1e-23
 Identities = 52/102 (50%), Positives = 69/102 (67%), Gaps = 9/102 (8%)
 Frame = +1

Query: 13  AGILLSNYNWCITNAQEAWFSNEETVRKTLGLLEEPVVYCPDDLEGTCTICFESHDCKAM 192
           A ILL ++NW ++   +AWF++EE VRK +GLLE+P+V  P+  E TC ICFE++    +
Sbjct: 87  ASILLRHHNWSVSRVHDAWFADEERVRKAVGLLEKPIVQHPNTRELTCGICFENYPRARI 146

Query: 193 YAASCGHLFC---------GSINDGPGCLKMRCPDPTCSAAL 291
             ASCGH +C          SINDGPGCL +RCPDPTC AA+
Sbjct: 147 EMASCGHPYCISCWEGYISTSINDGPGCLMLRCPDPTCDAAI 188


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