BLASTX nr result

ID: Coptis21_contig00011764 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011764
         (958 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004163582.1| PREDICTED: protein BREAST CANCER SUSCEPTIBIL...   179   7e-43
ref|XP_004151994.1| PREDICTED: protein BREAST CANCER SUSCEPTIBIL...   178   1e-42
ref|XP_003625346.1| PHD finger protein 11-like protein [Medicago...   166   1e-38
ref|XP_003520608.1| PREDICTED: protein BREAST CANCER SUSCEPTIBIL...   164   4e-38
ref|NP_973758.2| BRCA1-associated RING domain protein 1 [Arabido...   147   5e-33

>ref|XP_004163582.1| PREDICTED: protein BREAST CANCER SUSCEPTIBILITY 1 homolog [Cucumis
            sativus]
          Length = 679

 Score =  179 bits (455), Expect = 7e-43
 Identities = 111/360 (30%), Positives = 176/360 (48%), Gaps = 52/360 (14%)
 Frame = +1

Query: 34   SGSYSHVVNFWMLHFQKMGLELKCSLCFNMLNKPMLLPCDHMFCSTCIPKSTELGSDCPI 213
            S + +  +N W+LHFQKMGLELKC LC N  + P+LLPC+H+FC +C+P + ++GS CP+
Sbjct: 7    SANTTRFLNPWLLHFQKMGLELKCPLCLNFFDDPILLPCNHLFCKSCMPFAAQIGSVCPL 66

Query: 214  CYRHYTDKDMRRPPYMENILSIYKSMEATLGTSFFQTSLLQSDI---------------- 345
            C   + D+DMR  P+M+ ++SIY+S++AT  T+   + L+ +D+                
Sbjct: 67   CKAGFVDRDMRPAPFMDKMVSIYRSLDATFSTN--MSKLVSTDVGAAVEQSRFGQSVSYV 124

Query: 346  --------------------TGLQ-KNGDHNQELNS-----SQLTQTSPCSPPSFGETKD 447
                                 G++ + G+H +  +      SQ  Q S  SPPSFG+ K 
Sbjct: 125  ANNCKEFEGCSMPVDSKRQHLGIEGRKGEHGRHEDCVMPPVSQTDQLSSGSPPSFGDGKV 184

Query: 448  SDDDHSDRSGERSAKRSPAEGTVKKENEVGKRAKLCGRPNSAVEDQARNTKRQKLNFELR 627
            SDD   +  G  S   S     +   ++   +   C    S  E   R+ KRQKLN+   
Sbjct: 185  SDDSSDEYRGHGSKNTSDWISVITSADDKKLQLSKCTSSASEEEGHLRDLKRQKLNYGQL 244

Query: 628  DMAPTSGI----------NDQSNNLDAENKLEIPPFDAQPHTSYNLCEDPVFTCGFCQSS 777
                +S            N +++N   E+K ++    + P    +        C FCQSS
Sbjct: 245  KFRISSADQTHPPVSEPGNSETSNSGMEHKSQVTNASSMPLADADDTIVRNVKCAFCQSS 304

Query: 778  IVSEVSGPMVHYLKGKPVEGDKLTQPXXXXXXXXXXCVDWAPQVFFKEGTDNLVNLDAEL 957
             V+E +G ++HY+ G+ V+G +   P          CV+WAPQ +F+   D++ NL AE+
Sbjct: 305  KVTEDTGAVLHYMNGRLVDGVEAASP--NVIHVHKLCVEWAPQAYFQ--GDDVHNLKAEV 360


>ref|XP_004151994.1| PREDICTED: protein BREAST CANCER SUSCEPTIBILITY 1 homolog [Cucumis
            sativus]
          Length = 679

 Score =  178 bits (452), Expect = 1e-42
 Identities = 110/353 (31%), Positives = 173/353 (49%), Gaps = 52/353 (14%)
 Frame = +1

Query: 55   VNFWMLHFQKMGLELKCSLCFNMLNKPMLLPCDHMFCSTCIPKSTELGSDCPICYRHYTD 234
            +N W+LHFQKMGLELKC LC N  + P+LLPC+H+FC +C+P + ++GS CP+C   + D
Sbjct: 14   LNPWLLHFQKMGLELKCPLCLNFFDDPILLPCNHLFCKSCMPFAAQIGSVCPLCKAGFVD 73

Query: 235  KDMRRPPYMENILSIYKSMEATLGTSFFQTSLLQSDI----------------------- 345
            +DMR  P+M+ ++SIY+S++AT  T+   + L+ +D+                       
Sbjct: 74   RDMRPAPFMDKMVSIYRSLDATFSTN--MSKLVSTDVGAAVEQSRFGQSVSYVANNCKEF 131

Query: 346  -------------TGLQ-KNGDHNQELNS-----SQLTQTSPCSPPSFGETKDSDDDHSD 468
                          G++ + G+H +  +      SQ  Q S  SPPSFG+ K SDD   +
Sbjct: 132  EGCSMPVDSKRQHLGIEGRKGEHGRHEDCVMPPVSQTDQLSSGSPPSFGDGKVSDDSSDE 191

Query: 469  RSGERSAKRSPAEGTVKKENEVGKRAKLCGRPNSAVEDQARNTKRQKLNFELRDMAPTSG 648
              G  S   S     +   ++   +   C    S  E   R+ KRQKLN+       +S 
Sbjct: 192  YRGHGSKNTSDWISVITSADDKKLQLSKCTSSASEEEGHLRDLKRQKLNYGQLKFRISSA 251

Query: 649  I----------NDQSNNLDAENKLEIPPFDAQPHTSYNLCEDPVFTCGFCQSSIVSEVSG 798
                       N +++N   E+K ++    + P    +        C FCQSS V+E +G
Sbjct: 252  DQTHPPVSEPGNSETSNSGMEHKSQVTNASSMPLADADDTIVRNVKCAFCQSSKVTEDTG 311

Query: 799  PMVHYLKGKPVEGDKLTQPXXXXXXXXXXCVDWAPQVFFKEGTDNLVNLDAEL 957
             ++HY+ G+ V+G +   P          CV+WAPQ +F+   D++ NL AE+
Sbjct: 312  AVLHYMNGRLVDGVEAASP--NVIHVHKLCVEWAPQAYFQ--GDDVHNLKAEV 360


>ref|XP_003625346.1| PHD finger protein 11-like protein [Medicago truncatula]
            gi|355500361|gb|AES81564.1| PHD finger protein 11-like
            protein [Medicago truncatula]
          Length = 687

 Score =  166 bits (419), Expect = 1e-38
 Identities = 120/383 (31%), Positives = 176/383 (45%), Gaps = 81/383 (21%)
 Frame = +1

Query: 52   VVNFWMLHFQKMGLELKCSLCFNMLNKPMLLPCDHMFCSTCIPKSTELGSDCPICYRHYT 231
            ++N WMLHFQK+ LELKC LC N+  KP+LLPC+H+FCS+C+  ST + S+C +C    +
Sbjct: 15   LLNPWMLHFQKLALELKCPLCLNLFKKPVLLPCNHLFCSSCLADSTSIRSECALCNTKCS 74

Query: 232  DKDMRRPPYMENILSIYKSMEATLGTSFFQ------------------------------ 321
             KD+R  P++E+I++IYKS++AT   + FQ                              
Sbjct: 75   QKDIRHLPFVESIVTIYKSLDATFCANAFQQRSSDNTRVLEQCQTLHNSAFSNKVDKVLQ 134

Query: 322  TSLLQSDI-------TGLQKNGDHNQ------------------ELNSSQLTQTSPCSPP 426
             S + +++       +G++ NG   +                   +N +Q TQ+ P SPP
Sbjct: 135  NSCMSNEVGVGKNHQSGIKMNGKAKEVEMSCKRGADNHIAEKPDSMNLNQATQSEPDSPP 194

Query: 427  SFGETKDSDDDHSDRSGERSAKRSPAEGTVKKENEVGKRAKLCGR--------PNSAVED 582
             F +TK SD+  SD + E+      +E +  K +    +  L  R          S  ED
Sbjct: 195  -FCDTKGSDNGCSDLNSEKPLSLGRSESSSFKRSSTTGKGNLKERMPHFWSESSASENED 253

Query: 583  QARNTKRQKLNFELRDMAPTSGINDQSNN-----LDAENKLEIP-------------PFD 708
              R+ KRQK      ++    GI  QS +     +D+   LEI              P D
Sbjct: 254  LTRDLKRQK------NLTNEDGIVQQSTSYHNKLVDSRCDLEIKSDKDTGALVPSNAPSD 307

Query: 709  AQPHTSYNLCEDPVFTCGFCQSSIVSEVSGPMVHYLKGKPVEGDKLTQPXXXXXXXXXXC 888
              P TS          C FCQSS +SE +G M+HY  G  V G+   +P          C
Sbjct: 308  LYPSTSI---------CSFCQSSKISEATGSMLHYASGISVTGEAAMEP--NVVHVHKVC 356

Query: 889  VDWAPQVFFKEGTDNLVNLDAEL 957
            +DWAPQV+F   T  + NL AE+
Sbjct: 357  IDWAPQVYFVGET--VKNLKAEV 377


>ref|XP_003520608.1| PREDICTED: protein BREAST CANCER SUSCEPTIBILITY 1 homolog [Glycine
            max]
          Length = 678

 Score =  164 bits (414), Expect = 4e-38
 Identities = 121/386 (31%), Positives = 175/386 (45%), Gaps = 75/386 (19%)
 Frame = +1

Query: 25   MAESGSYSHVVNFWMLHFQKMGLELKCSLCFNMLNKPMLLPCDHMFCSTCIPKSTELGSD 204
            M +SGS + ++N WMLHFQK+ LELKC LC ++  +P+LLPC+H+FC++C+      GS+
Sbjct: 1    MDDSGSKTKLLNPWMLHFQKLALELKCPLCLSLFKRPVLLPCNHLFCNSCLADCITAGSE 60

Query: 205  CPICYRHYTDKDMRRPPYMENILSIYKSMEATLGTSFFQ--------------------- 321
            C +C   Y   D+R  P++EN+++IY+S++AT   S FQ                     
Sbjct: 61   CAVCKTTYAQTDVRHIPFVENVVAIYRSLDATFCASLFQSRSSGGGRVLEPCQTILNSTS 120

Query: 322  ----TSLLQSDITGLQKNG------------DHNQELNSS-------------------- 393
                T  L  ++T L + G            D  +EL  S                    
Sbjct: 121  SSLKTGKLPRNLTNLNEVGVGQTFKSKSVVHDKAEELELSCGRGKPNPMQSSQMGLGGRE 180

Query: 394  ----------QLTQTSPCSPPSFGETKDSDDDHSDRSGERSAKRSPAEGTVKKENEVG-- 537
                      Q+TQ++P SPP F +TK SD+D SD+  E        E +       G  
Sbjct: 181  QCGVMEMDVNQVTQSAPDSPP-FCDTKGSDNDCSDQDSEHPLPPGRLENSSLNRASAGNG 239

Query: 538  ----KRAKLCGRPN-SAVEDQARNTKRQKLNFELRDMAPTSGINDQSNNLDAENKLEIPP 702
                +  +L    + S  E  AR+ KRQK                   NLD +   + P 
Sbjct: 240  NLKERMGQLRSESSVSETEGLARDLKRQK-------------------NLDFKPGKD-PG 279

Query: 703  FDAQPHTSYNLCEDPV-FTCGFCQSSIVSEVSGPMVHYLKGKPVEGDKLTQPXXXXXXXX 879
                 + S +LC  P+   C FCQSS +SEV+GPM+HY  G  V GD   +P        
Sbjct: 280  APLPTNASIDLC--PIGRICSFCQSSKISEVTGPMLHYANGNLVTGDAAMKP--NVVPVH 335

Query: 880  XXCVDWAPQVFFKEGTDNLVNLDAEL 957
              C+DWAPQV+F    + + NL AE+
Sbjct: 336  RICIDWAPQVYF--DGEVVKNLKAEV 359


>ref|NP_973758.2| BRCA1-associated RING domain protein 1 [Arabidopsis thaliana]
            gi|332189525|gb|AEE27646.1| BRCA1-associated RING domain
            protein 1 [Arabidopsis thaliana]
          Length = 713

 Score =  147 bits (370), Expect = 5e-33
 Identities = 109/394 (27%), Positives = 175/394 (44%), Gaps = 92/394 (23%)
 Frame = +1

Query: 52   VVNFWMLHFQKMGLELKCSLCFNMLNKPMLLPCDHMFCSTCIPKSTELGSDCPICYRHYT 231
            ++N W+LH QK+ LELKC LC  +LN+P+LLPCDH+FC +C+ KS+++ S CP+C   + 
Sbjct: 8    LMNPWVLHLQKLELELKCPLCLKLLNRPVLLPCDHVFCDSCVHKSSQVESGCPVCKSKHP 67

Query: 232  DKDMRRPPYMENILSIYKSMEATLGTSFFQTSL-----LQSDITGLQKNGDHNQ----EL 384
             K  R   +ME+++SIYKS+ A +     Q  +      ++D      +  H +    E+
Sbjct: 68   KKGKRDLRFMESVISIYKSLNAAVSVHLPQLQIPNDCNYKNDALNNSNSPKHGESEDSEM 127

Query: 385  NSSQLTQTS-------------PCSPPSFGETKDSD---------------------DDH 462
                +++ S             P S  S    K  D                      +H
Sbjct: 128  TDKDVSKRSGGTDSSSRDGSPLPTSEESDPRPKHQDWTEKQLSDHLLLYEFESEYDAANH 187

Query: 463  SDRSGERSAKRSPAEGTVKKENEVGKRAKLCGRPNSAVEDQARNTKRQ-----KLNFELR 627
            +  S    A ++  + T  ++     R ++CG  +S +++ + N K Q     +L   LR
Sbjct: 188  TPESYTEQAAKNVRDITASEQPSNAARKRICG--DSFIQESSPNPKTQDPTLLRLMESLR 245

Query: 628  DMAPTSGINDQSNNL-------DAENKLEIPPFDAQ------PHTSYNLCE--------- 741
               PT  +  Q++ L       D++ K +I   DA       P    NL +         
Sbjct: 246  SDDPTDYVKAQNHQLPKSHTEQDSKRKRDITASDAMENHLKVPKRENNLMQKSADIDCNG 305

Query: 742  ----------------------DPVFTCGFCQSSIVSEVSGPMVHYLKGKPVEGDKLTQP 855
                                    +  CGFCQS+ VSE +G M+HY +G+PV+GD + + 
Sbjct: 306  KCSANSDDQLSEKISKALEQTSSNITICGFCQSARVSEATGEMLHYSRGRPVDGDDIFR- 364

Query: 856  XXXXXXXXXXCVDWAPQVFFKEGTDNLVNLDAEL 957
                      C++WAPQV++ EG D + NL AEL
Sbjct: 365  -SNVIHVHSACIEWAPQVYY-EG-DTVKNLKAEL 395


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