BLASTX nr result

ID: Coptis21_contig00011749 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011749
         (1336 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311465.1| predicted protein [Populus trichocarpa] gi|2...   184   3e-44
ref|XP_002276669.1| PREDICTED: uncharacterized protein LOC100266...   183   1e-43
ref|XP_002280530.1| PREDICTED: uncharacterized protein LOC100256...   180   6e-43
emb|CAN62793.1| hypothetical protein VITISV_024907 [Vitis vinifera]   179   1e-42
ref|XP_002315934.1| predicted protein [Populus trichocarpa] gi|2...   178   2e-42

>ref|XP_002311465.1| predicted protein [Populus trichocarpa] gi|222851285|gb|EEE88832.1|
            predicted protein [Populus trichocarpa]
          Length = 262

 Score =  184 bits (468), Expect = 3e-44
 Identities = 122/268 (45%), Positives = 149/268 (55%), Gaps = 17/268 (6%)
 Frame = -3

Query: 1175 MAIDLWSNMENSSLGISPRISFSHDICQA-EVVTIERH---RSDSLLLESNDFDFCISES 1008
            MAID+ S  E SS GISPRISFSHD+ Q  + V+IE H   R DS LL+S DFDFC   S
Sbjct: 1    MAIDVCS--EISSAGISPRISFSHDLNQTTDAVSIEDHYHRRLDSSLLDS-DFDFCFGNS 57

Query: 1007 FEQDSSCAEELFSDGKILPLEIKKQVLPPKPPTH---------PTSNENSKKESLKEIME 855
            F Q+ S A+ELFS+GKILP+EIKK ++  K               S+E ++K+ LKE + 
Sbjct: 58   FVQELSSADELFSNGKILPVEIKKHIISSKDTDQLKSLISQPQQNSSETTEKKQLKEFLS 117

Query: 854  QXXXXXXXXXXXXXXXXXXXXXXXXXSCGNGYKRSLICSLPLLSRSNSTGSAPTPKRSSS 675
                                       C +   + LI SL  LSRSNSTGSAP P +   
Sbjct: 118  MSLDADEKPASKSFWQFKRSNSLN---CDSTRSKGLIRSLHFLSRSNSTGSAPNPPKQGM 174

Query: 674  LKDNHNKHLPKTPSSNGYTKSALXXXXXXXXXXXSQK----KNYGSYNNGVRISPVLNVP 507
            L     K   +  +S    KS++            QK    +  GSY NGVRISPVLN+P
Sbjct: 175  LSKETQKPQLQKQASVPSRKSSVPSSAAFYSYNSQQKPPLLRKCGSYGNGVRISPVLNIP 234

Query: 506  PPYISKGTVNLFGLGSLFCNGKEKNKKK 423
            PPYIS+GTVNLFGLGSLFCNGK K KK+
Sbjct: 235  PPYISRGTVNLFGLGSLFCNGKVKKKKR 262


>ref|XP_002276669.1| PREDICTED: uncharacterized protein LOC100266297 [Vitis vinifera]
          Length = 252

 Score =  183 bits (464), Expect = 1e-43
 Identities = 114/246 (46%), Positives = 143/246 (58%), Gaps = 11/246 (4%)
 Frame = -3

Query: 1127 SPRISFSHDICQAEVVTIERHRSD----SLLLESNDFDFCISESFEQDSSCAEELFSDGK 960
            SPRISFS+D CQA+V +I+  +S     S L  S DFDFC+S SFE +SS A+ELFS+G 
Sbjct: 10   SPRISFSNDFCQADVASIDHCKSRNSELSSLDSSPDFDFCVSTSFEHESSSADELFSNGI 69

Query: 959  ILPLEIKKQVLPPK------PPTHPTSNENSKKESLKEIMEQXXXXXXXXXXXXXXXXXX 798
            ILP++I+++ + P+      P   P++NE+ KKES K I                     
Sbjct: 70   ILPIKIQERTVAPRSVASLPPLPSPSTNESLKKESSKGIAVSSCESQEKLQSSKSFWPFK 129

Query: 797  XXXXXXXSCGNGYKRSLICSLPLLSRSNSTGSAPTPKRSSSLKDNHNKHLPKTPSSNGYT 618
                    C N ++RSL+CSLPLLSRSNSTGS    KR+S         + K+ SS+  +
Sbjct: 130  RSSSLN--CDNVHRRSLMCSLPLLSRSNSTGSVQNSKRTSKQNSQKQPSMAKSSSSSS-S 186

Query: 617  KSALXXXXXXXXXXXSQKKNY-GSYNNGVRISPVLNVPPPYISKGTVNLFGLGSLFCNGK 441
             S+              KKNY GSY NGV ISPV+NV P YISKGT NLFGLGSLF NGK
Sbjct: 187  ASSTNFYTYPVPQKPPLKKNYGGSYGNGVWISPVINVSPAYISKGTANLFGLGSLFRNGK 246

Query: 440  EKNKKK 423
            EK  KK
Sbjct: 247  EKKSKK 252


>ref|XP_002280530.1| PREDICTED: uncharacterized protein LOC100256597 [Vitis vinifera]
          Length = 250

 Score =  180 bits (457), Expect = 6e-43
 Identities = 127/278 (45%), Positives = 155/278 (55%), Gaps = 27/278 (9%)
 Frame = -3

Query: 1175 MAIDLWSNMENSSLGISPRISFSHDICQAEVVTIERHRSDSLLLESNDFDFCISESFEQD 996
            MAI+L S  ++ S+ +SPRISFSHD+CQA+VV +E   S S    +NDFDFC+ ESF QD
Sbjct: 1    MAIELCS--DSCSMCMSPRISFSHDLCQADVVPVEHDPSQSNS-PTNDFDFCVYESFYQD 57

Query: 995  SSCAEELFSDGKILPLEIKKQVLPPK-------------PPTHPTSNENSKKESLKEIME 855
            +S A+ELF DGKILP++IKK++  PK             PP  PT N N KKES +EI  
Sbjct: 58   TSSADELFYDGKILPIQIKKKIATPKSTVQQPKPPLPLAPPPLPTQN-NRKKESSREIKR 116

Query: 854  QXXXXXXXXXXXXXXXXXXXXXXXXXSCGNGYKRSLICSLPLLSRSNSTGSAPTPKRSS- 678
                                       C +GY RSL C LPLLSRSNSTGS    KRS+ 
Sbjct: 117  TINEVYEKQNSKSFWRFKRSTSLN---CSSGYARSL-CPLPLLSRSNSTGSVSNAKRSAL 172

Query: 677  SLKDNHN-----KH-------LPKTPSSNGYTKSALXXXXXXXXXXXSQKKNYGSYNNGV 534
            S KD +N     KH        P + SS  Y K  L             KK YGS++NGV
Sbjct: 173  SSKDGNNIKNWHKHPSVAPIKSPHSSSSTSYQKPPL-------------KKTYGSHSNGV 219

Query: 533  RISPVLNVPPPYISKGTVNLFGLGSLFCNGKEK-NKKK 423
            RI+PVLNVP P       +LFGLGS+F NGK+K NK+K
Sbjct: 220  RINPVLNVPTP-------SLFGLGSIFSNGKDKINKRK 250


>emb|CAN62793.1| hypothetical protein VITISV_024907 [Vitis vinifera]
          Length = 250

 Score =  179 bits (454), Expect = 1e-42
 Identities = 127/278 (45%), Positives = 154/278 (55%), Gaps = 27/278 (9%)
 Frame = -3

Query: 1175 MAIDLWSNMENSSLGISPRISFSHDICQAEVVTIERHRSDSLLLESNDFDFCISESFEQD 996
            MAI+L S  ++ S+ +SPRISFSHD+CQA+VV +E   S S    +NDFDFC+ ESF QD
Sbjct: 1    MAIELCS--DSCSMCMSPRISFSHDLCQADVVPVEHXPSQSNS-PTNDFDFCVYESFYQD 57

Query: 995  SSCAEELFSDGKILPLEIKKQVLPPK-------------PPTHPTSNENSKKESLKEIME 855
            +S A+ELF DGKILP++IKK++  PK             PP  PT N N KKES +EI  
Sbjct: 58   TSSADELFYDGKILPIQIKKKIATPKSTVQQPKPPLPLAPPPLPTQN-NRKKESSREIKR 116

Query: 854  QXXXXXXXXXXXXXXXXXXXXXXXXXSCGNGYKRSLICSLPLLSRSNSTGSAPTPKRSS- 678
                                       C +GY RSL C LPLLSRSNSTGS    KRS+ 
Sbjct: 117  TINEVYEKQNSKSFWRFKRSTSLN---CSSGYARSL-CPLPLLSRSNSTGSVSNAKRSAL 172

Query: 677  SLKDNHN-----KH-------LPKTPSSNGYTKSALXXXXXXXXXXXSQKKNYGSYNNGV 534
            S KD +N     KH        P + SS  Y K  L             KK YGS++NGV
Sbjct: 173  SSKDGNNIKNWHKHPSVAPIKSPHSSSSTSYQKPPL-------------KKTYGSHSNGV 219

Query: 533  RISPVLNVPPPYISKGTVNLFGLGSLFCNGKEK-NKKK 423
            RI+PVLNVP P       +LFGLGS+F NGK+K NK K
Sbjct: 220  RINPVLNVPTP-------SLFGLGSIFSNGKDKINKXK 250


>ref|XP_002315934.1| predicted protein [Populus trichocarpa] gi|222864974|gb|EEF02105.1|
            predicted protein [Populus trichocarpa]
          Length = 264

 Score =  178 bits (452), Expect = 2e-42
 Identities = 120/269 (44%), Positives = 147/269 (54%), Gaps = 19/269 (7%)
 Frame = -3

Query: 1175 MAIDLWSNMENSSLGISPRISFSHDICQA-EVVTIERH---RSDSLLLESNDFDFCISES 1008
            MAID+ S  E SS GISPRISFSHD+ Q  + V+IE H   R DS LL+S DFDFCI  S
Sbjct: 1    MAIDVCS--EISSAGISPRISFSHDLNQTTDAVSIEDHHHRRLDSSLLDS-DFDFCIGNS 57

Query: 1007 FEQDSSCAEELFSDGKILPLEIKKQVLPPK-----------PPTHPTSNENSKKESLKEI 861
            F Q+ S A+ELFS+GKILP+EIKK  +  K            P H TS   ++K+ LKE 
Sbjct: 58   FVQELSSADELFSNGKILPVEIKKHSISSKGNNHQPKSLTSQPQHQTSTGTTEKKQLKEF 117

Query: 860  MEQXXXXXXXXXXXXXXXXXXXXXXXXXSCGNGYKRSLICSLPLLSRSNSTGSAPTPKRS 681
            + +                          C +   + LI SL  LSRSNSTGSAP P + 
Sbjct: 118  LSESLDADEKPASKSFWQFKRSSSLN---CDSTRSKGLIRSLHFLSRSNSTGSAPNPPKQ 174

Query: 680  SSLKDNHNKHLPKTPSSNGYTKSALXXXXXXXXXXXSQK----KNYGSYNNGVRISPVLN 513
            + L     K   +  +S    K ++            QK    +  GS+ NG RISPVLN
Sbjct: 175  AMLSKETQKPKLQKQASVPSRKPSVPSSAAFYSYNPQQKPPLLRKCGSHGNGFRISPVLN 234

Query: 512  VPPPYISKGTVNLFGLGSLFCNGKEKNKK 426
            +PPPYIS+G VN FGLGSLFCNGK K KK
Sbjct: 235  IPPPYISRGAVNPFGLGSLFCNGKVKRKK 263


Top