BLASTX nr result

ID: Coptis21_contig00011742 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011742
         (364 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004142774.1| PREDICTED: mitochondrial inner membrane prot...   133   2e-29
ref|XP_002526954.1| protein with unknown function [Ricinus commu...   131   5e-29
ref|XP_002300068.1| predicted protein [Populus trichocarpa] gi|2...   129   3e-28
ref|XP_002269112.1| PREDICTED: mitochondrial inner membrane prot...   121   5e-26
ref|XP_002301724.1| predicted protein [Populus trichocarpa] gi|2...   118   6e-25

>ref|XP_004142774.1| PREDICTED: mitochondrial inner membrane protease ATP23-like
           [Cucumis sativus] gi|449483813|ref|XP_004156699.1|
           PREDICTED: mitochondrial inner membrane protease
           ATP23-like [Cucumis sativus]
          Length = 195

 Score =  133 bits (334), Expect = 2e-29
 Identities = 62/97 (63%), Positives = 79/97 (81%)
 Frame = -1

Query: 292 MAKEPTSGTGSKSFSSNDNGGRTIEECQEMIQRTFRIPMVKFLREHLDKSGCYVGNNFIE 113
           MA+E T   GS    S+ NGGRT EEC++MI+R+ R PMVKFL EHL+KSGC +G+ FI+
Sbjct: 1   MAEESTPEPGSNRSYSSVNGGRTKEECEDMIRRSLRTPMVKFLMEHLEKSGCGIGDRFIK 60

Query: 112 AVNCEQKIAGGYVRGRGIIVCSNYMRFQDDVNQVVIH 2
           AV+CE++I+GGYVRG GI+VCSN+M  QD+VNQVVIH
Sbjct: 61  AVHCEKQISGGYVRGEGIMVCSNHMNIQDEVNQVVIH 97


>ref|XP_002526954.1| protein with unknown function [Ricinus communis]
           gi|223533706|gb|EEF35441.1| protein with unknown
           function [Ricinus communis]
          Length = 187

 Score =  131 bits (330), Expect = 5e-29
 Identities = 62/97 (63%), Positives = 78/97 (80%)
 Frame = -1

Query: 292 MAKEPTSGTGSKSFSSNDNGGRTIEECQEMIQRTFRIPMVKFLREHLDKSGCYVGNNFIE 113
           M  EPT+  GS        GGRTIEECQ+MI+++ R PMVKFLREHL+K+GC +G+NFI+
Sbjct: 1   MEGEPTNTPGS--------GGRTIEECQDMIRKSLRTPMVKFLREHLEKAGCGIGDNFIK 52

Query: 112 AVNCEQKIAGGYVRGRGIIVCSNYMRFQDDVNQVVIH 2
           AVNCE+K++GGYV G GI+VCSN+M  QD+VNQVVIH
Sbjct: 53  AVNCEKKMSGGYVSGDGIVVCSNHMNMQDEVNQVVIH 89


>ref|XP_002300068.1| predicted protein [Populus trichocarpa] gi|222847326|gb|EEE84873.1|
           predicted protein [Populus trichocarpa]
          Length = 187

 Score =  129 bits (323), Expect = 3e-28
 Identities = 61/97 (62%), Positives = 76/97 (78%)
 Frame = -1

Query: 292 MAKEPTSGTGSKSFSSNDNGGRTIEECQEMIQRTFRIPMVKFLREHLDKSGCYVGNNFIE 113
           M +EP +  GS         G T+EEC+ MI+R+FR PMVKFLREH++K+GC VG NF++
Sbjct: 1   MTEEPGTTPGSD--------GTTVEECKNMIRRSFRTPMVKFLREHMEKAGCGVGENFLK 52

Query: 112 AVNCEQKIAGGYVRGRGIIVCSNYMRFQDDVNQVVIH 2
           AVNC++KIAGGYVRG GI+VCSN+M  QDDVNQVVIH
Sbjct: 53  AVNCDKKIAGGYVRGEGIMVCSNHMNTQDDVNQVVIH 89


>ref|XP_002269112.1| PREDICTED: mitochondrial inner membrane protease ATP23 [Vitis
           vinifera] gi|296081332|emb|CBI17714.3| unnamed protein
           product [Vitis vinifera]
          Length = 195

 Score =  121 bits (304), Expect = 5e-26
 Identities = 52/83 (62%), Positives = 69/83 (83%)
 Frame = -1

Query: 250 SSNDNGGRTIEECQEMIQRTFRIPMVKFLREHLDKSGCYVGNNFIEAVNCEQKIAGGYVR 71
           SS  NGG T++EC++MIQ++ R PMVKFLRE+L+KSGC +G+ FI+A+ C  K++GGY R
Sbjct: 15  SSGVNGGMTVKECEQMIQKSLRTPMVKFLRENLEKSGCAIGDKFIKAIYCNTKVSGGYAR 74

Query: 70  GRGIIVCSNYMRFQDDVNQVVIH 2
           G GI+VCSN+M  QD+VNQVVIH
Sbjct: 75  GEGIVVCSNHMNIQDEVNQVVIH 97


>ref|XP_002301724.1| predicted protein [Populus trichocarpa] gi|222843450|gb|EEE80997.1|
           predicted protein [Populus trichocarpa]
          Length = 174

 Score =  118 bits (295), Expect = 6e-25
 Identities = 50/76 (65%), Positives = 67/76 (88%)
 Frame = -1

Query: 229 RTIEECQEMIQRTFRIPMVKFLREHLDKSGCYVGNNFIEAVNCEQKIAGGYVRGRGIIVC 50
           RT++EC++MI+R+FR PMV+FLRE+L+K+GC V  NF +AVNC++ IAGGYVRG+GI+VC
Sbjct: 1   RTVKECEDMIRRSFRTPMVRFLRENLEKAGCGVSENFFKAVNCDKSIAGGYVRGKGIMVC 60

Query: 49  SNYMRFQDDVNQVVIH 2
           SN+M  QDDVNQV+ H
Sbjct: 61  SNHMNIQDDVNQVIAH 76


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