BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011741
         (995 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21383.3| unnamed protein product [Vitis vinifera]              339   7e-91
ref|XP_002283118.1| PREDICTED: uncharacterized protein LOC100247...   339   7e-91
dbj|BAJ53198.1| JHL03K20.7 [Jatropha curcas]                          305   1e-80
emb|CAN64038.1| hypothetical protein VITISV_021557 [Vitis vinifera]   303   3e-80
ref|XP_003611682.1| RNA-binding protein with multiple splicing [...   300   3e-79

>emb|CBI21383.3| unnamed protein product [Vitis vinifera]
          Length = 333

 Score =  339 bits (869), Expect = 7e-91
 Identities = 174/268 (64%), Positives = 206/268 (76%), Gaps = 2/268 (0%)
 Frame = +3

Query: 198 PQNAPIPSHHNQYYGDQFYDDLRTLFVAGLPEDVETREIYNLFREFPGYESSKLRRATEH 377
           P   P  S+    Y     D++RTLF+AGLPEDV+ REIYNLFREFPGYESS LR  +++
Sbjct: 56  PPPPPFASYAPPLYPQTSVDEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPSQN 115

Query: 378 NKPYGFAVFLDQPSAVAAMQALNGLVFDLEKKSTLYISLAKSNSKSKRARTDDGVSGSSD 557
           ++P+ FAVFLDQ SA+AAM ALNG+VFDLEK STLYI LAKSNS+SKR+R DD   G  D
Sbjct: 116 SQPFAFAVFLDQQSAIAAMHALNGMVFDLEKGSTLYIDLAKSNSRSKRSRADDERPG-LD 174

Query: 558 KKFRGSAAYSNFHDTGVGSNIHMPGMGNSAYNMIGYSSTQSHG-YDSGVAEGAESRRMKS 734
           KK +GSA +S   D+GVGS +HMPGMGNSAY+MIGY STQSHG +D        ++   S
Sbjct: 175 KKVKGSAGFSRPPDSGVGS-VHMPGMGNSAYSMIGYPSTQSHGNFDGRALNETPAKLNNS 233

Query: 735 STPYIPQNSTPCPTLFVANLGPTCAEQELIEVFSRCAGFLKLKMQNKNGAPVAFVDFQDI 914
           S PY PQN+TPCPTLFVANLGPTC+EQELI++FSRC GFLKLKMQ+  G PVAFVDFQD 
Sbjct: 234 SAPYFPQNATPCPTLFVANLGPTCSEQELIDIFSRCPGFLKLKMQSTYGTPVAFVDFQDT 293

Query: 915 ACSTAALNSVQDMILYTS-NGEGMRLEY 995
            CST ALN +Q  +LY+S  GEGMR+EY
Sbjct: 294 PCSTGALNHLQGTVLYSSPAGEGMRIEY 321


>ref|XP_002283118.1| PREDICTED: uncharacterized protein LOC100247532 [Vitis vinifera]
          Length = 336

 Score =  339 bits (869), Expect = 7e-91
 Identities = 174/268 (64%), Positives = 206/268 (76%), Gaps = 2/268 (0%)
 Frame = +3

Query: 198 PQNAPIPSHHNQYYGDQFYDDLRTLFVAGLPEDVETREIYNLFREFPGYESSKLRRATEH 377
           P   P  S+    Y     D++RTLF+AGLPEDV+ REIYNLFREFPGYESS LR  +++
Sbjct: 59  PPPPPFASYAPPLYPQTSVDEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPSQN 118

Query: 378 NKPYGFAVFLDQPSAVAAMQALNGLVFDLEKKSTLYISLAKSNSKSKRARTDDGVSGSSD 557
           ++P+ FAVFLDQ SA+AAM ALNG+VFDLEK STLYI LAKSNS+SKR+R DD   G  D
Sbjct: 119 SQPFAFAVFLDQQSAIAAMHALNGMVFDLEKGSTLYIDLAKSNSRSKRSRADDERPG-LD 177

Query: 558 KKFRGSAAYSNFHDTGVGSNIHMPGMGNSAYNMIGYSSTQSHG-YDSGVAEGAESRRMKS 734
           KK +GSA +S   D+GVGS +HMPGMGNSAY+MIGY STQSHG +D        ++   S
Sbjct: 178 KKVKGSAGFSRPPDSGVGS-VHMPGMGNSAYSMIGYPSTQSHGNFDGRALNETPAKLNNS 236

Query: 735 STPYIPQNSTPCPTLFVANLGPTCAEQELIEVFSRCAGFLKLKMQNKNGAPVAFVDFQDI 914
           S PY PQN+TPCPTLFVANLGPTC+EQELI++FSRC GFLKLKMQ+  G PVAFVDFQD 
Sbjct: 237 SAPYFPQNATPCPTLFVANLGPTCSEQELIDIFSRCPGFLKLKMQSTYGTPVAFVDFQDT 296

Query: 915 ACSTAALNSVQDMILYTS-NGEGMRLEY 995
            CST ALN +Q  +LY+S  GEGMR+EY
Sbjct: 297 PCSTGALNHLQGTVLYSSPAGEGMRIEY 324


>dbj|BAJ53198.1| JHL03K20.7 [Jatropha curcas]
          Length = 316

 Score =  305 bits (780), Expect = 1e-80
 Identities = 166/265 (62%), Positives = 193/265 (72%), Gaps = 3/265 (1%)
 Frame = +3

Query: 210 PIPSHHNQYYGDQFYDDLRTLFVAGLPEDVETREIYNLFREFPGYESSKLRRATEHNKPY 389
           P  S+   Y     +D +RTLFVAGLP+DV+ REIYNLFREFPGYESS LR  T+ ++P+
Sbjct: 58  PFTSYPPSYAPHAPHDPVRTLFVAGLPDDVKPREIYNLFREFPGYESSHLRSPTQTSQPF 117

Query: 390 GFAVFLDQPSAVAAMQALNGLVFDLEKKSTLYISLAKSNSKSKRARTDDGVSGSSDKKFR 569
            FA F+DQPSAVAAM ALNG+VFDLEK STLYI LAKSNS+SKR+R+DD  SG   +   
Sbjct: 118 AFATFIDQPSAVAAMHALNGMVFDLEKGSTLYIDLAKSNSRSKRSRSDDEWSGLDKRVKA 177

Query: 570 GSAAYSNFHDTGVGSNIHMPGMGNSAYNMIGYSSTQSHG-YDSGVA-EGAESRRMKSSTP 743
             A      D+G GS +H+PGM NSAYNMIGY+S QSHG +DS  A E   +    SS P
Sbjct: 178 SPATPGGSLDSGFGS-VHLPGMSNSAYNMIGYTSPQSHGIFDSRAASEPTGANSSNSSAP 236

Query: 744 YIPQNSTPCPTLFVANLGPTCAEQELIEVFSRCAGFLKLKMQNKNGAPVAFVDFQDIACS 923
                  PCPTLFVANLGP C EQELI+VFSRC GFLKLKMQ+  GAPVAFVDFQD +CS
Sbjct: 237 -------PCPTLFVANLGPNCMEQELIQVFSRCPGFLKLKMQSTYGAPVAFVDFQDTSCS 289

Query: 924 TAALNSVQDMILYTS-NGEGMRLEY 995
           T ALN +Q  ILY+S  G+GMRLEY
Sbjct: 290 TGALNHLQGTILYSSPAGDGMRLEY 314


>emb|CAN64038.1| hypothetical protein VITISV_021557 [Vitis vinifera]
          Length = 335

 Score =  303 bits (777), Expect = 3e-80
 Identities = 155/238 (65%), Positives = 182/238 (76%), Gaps = 1/238 (0%)
 Frame = +3

Query: 198 PQNAPIPSHHNQYYGDQFYDDLRTLFVAGLPEDVETREIYNLFREFPGYESSKLRRATEH 377
           P   P  S+    Y     D++RTLF+AGLPEDV+ REIYNLFREFPGYESS LR  +++
Sbjct: 56  PPPPPFASYAPPLYPQTSVDEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPSQN 115

Query: 378 NKPYGFAVFLDQPSAVAAMQALNGLVFDLEKKSTLYISLAKSNSKSKRARTDDGVSGSSD 557
           ++P+ FAVFLDQ SA+A M ALNG+VFDLEK STLYI LAKSNS+SKR+R DD   G  D
Sbjct: 116 SQPFAFAVFLDQQSAIATMHALNGMVFDLEKGSTLYIDLAKSNSRSKRSRADDERPG-LD 174

Query: 558 KKFRGSAAYSNFHDTGVGSNIHMPGMGNSAYNMIGYSSTQSHG-YDSGVAEGAESRRMKS 734
           KK +GSA +S   D+GVGS +HMPGMGNSAY+MIGY STQSHG +D        ++   S
Sbjct: 175 KKVKGSAGFSRPPDSGVGS-VHMPGMGNSAYSMIGYPSTQSHGNFDGRALNETPAKLNNS 233

Query: 735 STPYIPQNSTPCPTLFVANLGPTCAEQELIEVFSRCAGFLKLKMQNKNGAPVAFVDFQ 908
           S PY PQN TPCPTLFVANLGPTC+EQELI++FSRC GFLKLKMQ+  G PVAFVDFQ
Sbjct: 234 SAPYFPQNVTPCPTLFVANLGPTCSEQELIDIFSRCPGFLKLKMQSTYGTPVAFVDFQ 291


>ref|XP_003611682.1| RNA-binding protein with multiple splicing [Medicago truncatula]
           gi|355513017|gb|AES94640.1| RNA-binding protein with
           multiple splicing [Medicago truncatula]
          Length = 340

 Score =  300 bits (769), Expect = 3e-79
 Identities = 171/289 (59%), Positives = 202/289 (69%), Gaps = 23/289 (7%)
 Frame = +3

Query: 198 PQNAPIPSHHNQYYGDQF-------YD-----------DLRTLFVAGLPEDVETREIYNL 323
           P  AP+P  H+ +   Q+       YD           D+RTLF+AGLPEDV+ REIYNL
Sbjct: 42  PPGAPLPPPHHPHPHPQYIPQQQQVYDSYVPSPLASTNDVRTLFIAGLPEDVKPREIYNL 101

Query: 324 FREFPGYESSKLRRATEHNKPYGFAVFLDQPSAVAAMQALNGLVFDLEKKSTLYISLAKS 503
           FREFPGYESS LR     ++ + FAVF +Q SA+ A+ ALNG++FDLEK STLYI LAKS
Sbjct: 102 FREFPGYESSHLRSPNNSSQAFAFAVFSNQQSAIMALHALNGMIFDLEKGSTLYIDLAKS 161

Query: 504 NSKSKRARTDDGVSGSSDKKFRGSAAYSNFHDTGVGSNIHMPGMGNSAY--NMIGYSSTQ 677
           NS++KRAR DD    SSDKK RGSA+     D+GV S+IHMPGMGN A+  NMIGY   Q
Sbjct: 162 NSRAKRARIDDD-RASSDKKARGSASSWPTPDSGV-SSIHMPGMGNPAFNTNMIGYPPAQ 219

Query: 678 SHGYDSGVA--EGAESRRMKSSTPYIPQNSTPCPTLFVANLGPTCAEQELIEVFSRCAGF 851
           SHG   G A  +G      K S PYIP N+TPC TLFVANLGP+C EQELI+VFSR  GF
Sbjct: 220 SHGIADGNAMHDGLFLNLKKCSNPYIPTNTTPCATLFVANLGPSCNEQELIQVFSRFPGF 279

Query: 852 LKLKMQNKNGAPVAFVDFQDIACSTAALNSVQDMILYTS-NGEGMRLEY 995
           LKLKMQ+  GAPV+FVDF+DI  +T ALNS+Q  ILY+S  GEGMRLEY
Sbjct: 280 LKLKMQSTYGAPVSFVDFKDIPSATVALNSLQGTILYSSPAGEGMRLEY 328