BLASTX nr result

ID: Coptis21_contig00011739 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011739
         (623 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301104.1| predicted protein [Populus trichocarpa] gi|1...   210   2e-52
ref|XP_002285581.1| PREDICTED: ubiquitin-fold modifier-conjugati...   209   2e-52
ref|XP_002509999.1| Ufm1-conjugating enzyme, putative [Ricinus c...   208   7e-52
ref|XP_003603683.1| Ubiquitin-fold modifier-conjugating enzyme [...   207   9e-52
ref|XP_003603682.1| Ubiquitin-fold modifier-conjugating enzyme [...   207   9e-52

>ref|XP_002301104.1| predicted protein [Populus trichocarpa] gi|118484728|gb|ABK94233.1|
           unknown [Populus trichocarpa]
           gi|222842830|gb|EEE80377.1| predicted protein [Populus
           trichocarpa]
          Length = 174

 Score =  210 bits (534), Expect = 2e-52
 Identities = 95/102 (93%), Positives = 101/102 (99%)
 Frame = +3

Query: 3   WYVHNLLKYEFDLQFDIPVTYPATAPELELPQLDGKTHKMYRGGKICLTVHFKPLWAKNC 182
           WYVHNLLKYEFDLQFDIPVTYP+TAPELELPQLDGKT KMYRGGKICLTVHFKPLWAKNC
Sbjct: 73  WYVHNLLKYEFDLQFDIPVTYPSTAPELELPQLDGKTQKMYRGGKICLTVHFKPLWAKNC 132

Query: 183 PRFGIAHALCLGLAPWLAAEVPILVDSGMIKHKDNATSSTEA 308
           PRFGIAHALCLGLAPWLAAEVP+LVDSGMIKHKD+ATS++E+
Sbjct: 133 PRFGIAHALCLGLAPWLAAEVPVLVDSGMIKHKDDATSTSES 174


>ref|XP_002285581.1| PREDICTED: ubiquitin-fold modifier-conjugating enzyme 1 [Vitis
           vinifera] gi|147816413|emb|CAN77440.1| hypothetical
           protein VITISV_007403 [Vitis vinifera]
           gi|302142114|emb|CBI19317.3| unnamed protein product
           [Vitis vinifera]
          Length = 174

 Score =  209 bits (533), Expect = 2e-52
 Identities = 94/102 (92%), Positives = 100/102 (98%)
 Frame = +3

Query: 3   WYVHNLLKYEFDLQFDIPVTYPATAPELELPQLDGKTHKMYRGGKICLTVHFKPLWAKNC 182
           WYVHNLLKYEFDLQFDIPVTYP TAPE+ELPQLDGKTHKMYRGGKICLTVHFKPLWAKNC
Sbjct: 73  WYVHNLLKYEFDLQFDIPVTYPLTAPEIELPQLDGKTHKMYRGGKICLTVHFKPLWAKNC 132

Query: 183 PRFGIAHALCLGLAPWLAAEVPILVDSGMIKHKDNATSSTEA 308
           PRFGIAHALCLGLAPWLAAE+PILVDSGMIKHKD++ SS+E+
Sbjct: 133 PRFGIAHALCLGLAPWLAAEIPILVDSGMIKHKDDSASSSES 174


>ref|XP_002509999.1| Ufm1-conjugating enzyme, putative [Ricinus communis]
           gi|223550700|gb|EEF52186.1| Ufm1-conjugating enzyme,
           putative [Ricinus communis]
          Length = 174

 Score =  208 bits (529), Expect = 7e-52
 Identities = 93/102 (91%), Positives = 100/102 (98%)
 Frame = +3

Query: 3   WYVHNLLKYEFDLQFDIPVTYPATAPELELPQLDGKTHKMYRGGKICLTVHFKPLWAKNC 182
           WYVHNLLKYEFDLQFDIP+TYP+TAPE+ELPQLDGKT KMYRGGKICLT+HFKPLWAKNC
Sbjct: 73  WYVHNLLKYEFDLQFDIPITYPSTAPEIELPQLDGKTQKMYRGGKICLTIHFKPLWAKNC 132

Query: 183 PRFGIAHALCLGLAPWLAAEVPILVDSGMIKHKDNATSSTEA 308
           PRFGIAHALCLGLAPWLAAEVPILVDSGMIKHKD+AT S+E+
Sbjct: 133 PRFGIAHALCLGLAPWLAAEVPILVDSGMIKHKDDATPSSES 174


>ref|XP_003603683.1| Ubiquitin-fold modifier-conjugating enzyme [Medicago truncatula]
           gi|355492731|gb|AES73934.1| Ubiquitin-fold
           modifier-conjugating enzyme [Medicago truncatula]
          Length = 318

 Score =  207 bits (528), Expect = 9e-52
 Identities = 95/102 (93%), Positives = 100/102 (98%)
 Frame = +3

Query: 3   WYVHNLLKYEFDLQFDIPVTYPATAPELELPQLDGKTHKMYRGGKICLTVHFKPLWAKNC 182
           WYV+NLLKYEFDLQFDIPVTYP+TAPELELPQLDGKT KMYRGGKICLTVHFKPLWAKNC
Sbjct: 217 WYVYNLLKYEFDLQFDIPVTYPSTAPELELPQLDGKTQKMYRGGKICLTVHFKPLWAKNC 276

Query: 183 PRFGIAHALCLGLAPWLAAEVPILVDSGMIKHKDNATSSTEA 308
           PRFGIAHALCLGLAPWLAAEVPILVDSGMIKHKD+AT+S E+
Sbjct: 277 PRFGIAHALCLGLAPWLAAEVPILVDSGMIKHKDDATTSAES 318


>ref|XP_003603682.1| Ubiquitin-fold modifier-conjugating enzyme [Medicago truncatula]
           gi|355492730|gb|AES73933.1| Ubiquitin-fold
           modifier-conjugating enzyme [Medicago truncatula]
          Length = 174

 Score =  207 bits (528), Expect = 9e-52
 Identities = 95/102 (93%), Positives = 100/102 (98%)
 Frame = +3

Query: 3   WYVHNLLKYEFDLQFDIPVTYPATAPELELPQLDGKTHKMYRGGKICLTVHFKPLWAKNC 182
           WYV+NLLKYEFDLQFDIPVTYP+TAPELELPQLDGKT KMYRGGKICLTVHFKPLWAKNC
Sbjct: 73  WYVYNLLKYEFDLQFDIPVTYPSTAPELELPQLDGKTQKMYRGGKICLTVHFKPLWAKNC 132

Query: 183 PRFGIAHALCLGLAPWLAAEVPILVDSGMIKHKDNATSSTEA 308
           PRFGIAHALCLGLAPWLAAEVPILVDSGMIKHKD+AT+S E+
Sbjct: 133 PRFGIAHALCLGLAPWLAAEVPILVDSGMIKHKDDATTSAES 174


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