BLASTX nr result

ID: Coptis21_contig00011710 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011710
         (1622 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004145284.1| PREDICTED: uncharacterized protein LOC101216...   261   4e-67
emb|CAN81044.1| hypothetical protein VITISV_006762 [Vitis vinifera]   256   2e-65
ref|XP_002283159.1| PREDICTED: uncharacterized protein LOC100253...   255   2e-65
emb|CBI16094.3| unnamed protein product [Vitis vinifera]              242   2e-61
ref|XP_002520534.1| DNA binding protein, putative [Ricinus commu...   224   5e-56

>ref|XP_004145284.1| PREDICTED: uncharacterized protein LOC101216423 [Cucumis sativus]
            gi|449470904|ref|XP_004153145.1| PREDICTED:
            uncharacterized protein LOC101205712 [Cucumis sativus]
            gi|449525506|ref|XP_004169758.1| PREDICTED:
            uncharacterized LOC101205712 [Cucumis sativus]
          Length = 336

 Score =  261 bits (667), Expect = 4e-67
 Identities = 161/307 (52%), Positives = 185/307 (60%), Gaps = 33/307 (10%)
 Frame = -2

Query: 1384 DPSCKTSASEERVQEWETGLPSATDLTPLSQYLISPELASAFSITAEPFQTMLDVNRASQ 1205
            D SC   A EERV EWETGLP A DLTPLSQ LI PELASAFSI+  P +T++DVNRASQ
Sbjct: 20   DESC---AHEERVFEWETGLPDADDLTPLSQTLIPPELASAFSISTGPCRTLMDVNRASQ 76

Query: 1204 NTISSLRR-QNSGFGDKNFNSLCSFMEDRCGSDEPMXXXXXXXXXXXXXXEKRKIQSVEN 1028
            NT+S+LR  Q   F   NF S   F +DR    + M              + RK++ V+ 
Sbjct: 77   NTLSNLRGFQAQAFSSNNFKS---FNDDRTQDHDAMVVEGDEATERDAGSDSRKLRKVDC 133

Query: 1027 VEEADSALRMENLNEDCSARTLKRARLVWTPQLHKRFVDVVGHLGIDNAVPKTIMQMMNV 848
             EEADSALR +N  +D SARTLKR RLVWTPQLHKRFVDVV HLGI NAVPKTIMQ+MNV
Sbjct: 134  AEEADSALRTDNSMDDPSARTLKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNV 193

Query: 847  EGLTRENVASHLQKYRLFVKR------QGPASSDQLFASTPT------------------ 740
            EGLTRENVASHLQKYRL++KR      +GP+S D++FASTP                   
Sbjct: 194  EGLTRENVASHLQKYRLYLKRMQGSSNEGPSSPDRIFASTPVPPTLHESTNSGQANGNGH 253

Query: 739  --VPQNMPLAP--MPYAAXXXXXXXXXXXXXXGNLA-PGS---YSGFEFHPYGMSREHQG 584
              VP  MP  P  MP                   +A PGS   Y GFE HP+ M   HQ 
Sbjct: 254  LPVPTPMPYGPPMMPMPVLGMAASGHAHSYMGMPVAHPGSAQGYPGFETHPFNMM--HQR 311

Query: 583  HWPGNKF 563
             W GNK+
Sbjct: 312  DWSGNKY 318


>emb|CAN81044.1| hypothetical protein VITISV_006762 [Vitis vinifera]
          Length = 362

 Score =  256 bits (653), Expect = 2e-65
 Identities = 161/315 (51%), Positives = 191/315 (60%), Gaps = 31/315 (9%)
 Frame = -2

Query: 1444 PHQKLYSSIQQTPFFMEEER--DPSCKTSASEERVQEWETGLPSATDLTPLSQYLISPEL 1271
            P   L   I  T    EE R  D +      +ERV EWE GLP+A DLTPLSQ LI PEL
Sbjct: 38   PWDVLLWGIVSTNSMGEEVRMSDINGGDGGDDERVLEWEAGLPAADDLTPLSQPLIPPEL 97

Query: 1270 ASAFSITAEPFQTMLDVNRASQNTISSLRRQNSGFGDKNFNSLCSFMEDRCGSDEPMXXX 1091
            ASAFSIT EP +T+L+VNRASQ+T S++R Q+  F   NF S   F E+R   +  +   
Sbjct: 98   ASAFSITPEPCRTLLEVNRASQSTFSTIRGQSHSFSSNNFKS---FNEER-NREPAVVEP 153

Query: 1090 XXXXXXXXXXXEKRKIQSVENVEEADSALRMENLNEDCSARTLKRARLVWTPQLHKRFVD 911
                       E RK++ V+  EEADSA+R EN N+D SARTLKR RLVWTPQLHKRFVD
Sbjct: 154  EETGDRDGSGSESRKVRKVDCAEEADSAMRTENSNDDPSARTLKRPRLVWTPQLHKRFVD 213

Query: 910  VVGHLGIDNAVPKTIMQMMNVEGLTRENVASHLQKYRLFVKR------QGPASSDQLFAS 749
            VVGHLGI NAVPKTIMQ+MNVEGLTRENVASHLQKYRL++KR      +GP+SSD LFAS
Sbjct: 214  VVGHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGLSNEGPSSSDHLFAS 273

Query: 748  TPTVPQNM-------------------PLAPMPYAAXXXXXXXXXXXXXXGNL---APGS 635
            TP VPQ++                   P+ PMPY                G +    PG 
Sbjct: 274  TP-VPQSLHESGGSVHGNGHGNGHMSVPI-PMPYGQTMMHMPVLGVSHGHGQMGMSGPGG 331

Query: 634  YSGFE-FHPYGMSRE 593
            Y G+E  HPY M ++
Sbjct: 332  YHGYESHHPYNMLQQ 346


>ref|XP_002283159.1| PREDICTED: uncharacterized protein LOC100253567 [Vitis vinifera]
          Length = 311

 Score =  255 bits (652), Expect = 2e-65
 Identities = 153/284 (53%), Positives = 182/284 (64%), Gaps = 29/284 (10%)
 Frame = -2

Query: 1357 EERVQEWETGLPSATDLTPLSQYLISPELASAFSITAEPFQTMLDVNRASQNTISSLRRQ 1178
            +ERV EWE GLP+A DLTPLSQ LI PELASAFSIT EP +T+L+VNRASQ+T S++R Q
Sbjct: 18   DERVLEWEAGLPAADDLTPLSQPLIPPELASAFSITPEPCRTLLEVNRASQSTFSTIRGQ 77

Query: 1177 NSGFGDKNFNSLCSFMEDRCGSDEPMXXXXXXXXXXXXXXEKRKIQSVENVEEADSALRM 998
            +  F   NF S   F E+R   +  +              E RK++ V+  EEADSA+R 
Sbjct: 78   SHSFSSNNFKS---FNEER-NREPAVVEPEETGDRDGSGSESRKVRKVDCAEEADSAMRT 133

Query: 997  ENLNEDCSARTLKRARLVWTPQLHKRFVDVVGHLGIDNAVPKTIMQMMNVEGLTRENVAS 818
            EN N+D SARTLKR RLVWTPQLHKRFVDVVGHLGI NAVPKTIMQ+MNVEGLTRENVAS
Sbjct: 134  ENSNDDPSARTLKRPRLVWTPQLHKRFVDVVGHLGIKNAVPKTIMQLMNVEGLTRENVAS 193

Query: 817  HLQKYRLFVKR------QGPASSDQLFASTPTVPQNM-------------------PLAP 713
            HLQKYRL++KR      +GP+SSD LFASTP VPQ++                   P+ P
Sbjct: 194  HLQKYRLYLKRMQGLSNEGPSSSDHLFASTP-VPQSLHESGGSVHGNGHGNGHMSVPI-P 251

Query: 712  MPYAAXXXXXXXXXXXXXXGNL---APGSYSGFE-FHPYGMSRE 593
            MPY                G +    PG Y G+E  HPY M ++
Sbjct: 252  MPYGQTMMHMPVLGVSHGHGQMGMSGPGGYHGYESHHPYNMLQQ 295


>emb|CBI16094.3| unnamed protein product [Vitis vinifera]
          Length = 395

 Score =  242 bits (617), Expect = 2e-61
 Identities = 150/284 (52%), Positives = 175/284 (61%), Gaps = 29/284 (10%)
 Frame = -2

Query: 1357 EERVQEWETGLPSATDLTPLSQYLISPELASAFSITAEPFQTMLDVNRASQNTISSLRRQ 1178
            +ERV EWE GLP+A DLTPLSQ LI PELASAFSIT EP +T+L+VNRASQ+T S++R Q
Sbjct: 129  DERVLEWEAGLPAADDLTPLSQPLIPPELASAFSITPEPCRTLLEVNRASQSTFSTIRGQ 188

Query: 1177 NSGFGDKNFNSLCSFMEDRCGSDEPMXXXXXXXXXXXXXXEKRKIQSVENVEEADSALRM 998
            +  F   NF S   F E+R  + EP                           EADSA+R 
Sbjct: 189  SHSFSSNNFKS---FNEER--NREPA--------------------------EADSAMRT 217

Query: 997  ENLNEDCSARTLKRARLVWTPQLHKRFVDVVGHLGIDNAVPKTIMQMMNVEGLTRENVAS 818
            EN N+D SARTLKR RLVWTPQLHKRFVDVVGHLGI NAVPKTIMQ+MNVEGLTRENVAS
Sbjct: 218  ENSNDDPSARTLKRPRLVWTPQLHKRFVDVVGHLGIKNAVPKTIMQLMNVEGLTRENVAS 277

Query: 817  HLQKYRLFVKR------QGPASSDQLFASTPTVPQNM-------------------PLAP 713
            HLQKYRL++KR      +GP+SSD LFASTP VPQ++                   P+ P
Sbjct: 278  HLQKYRLYLKRMQGLSNEGPSSSDHLFASTP-VPQSLHESGGSVHGNGHGNGHMSVPI-P 335

Query: 712  MPYAAXXXXXXXXXXXXXXGNL---APGSYSGFE-FHPYGMSRE 593
            MPY                G +    PG Y G+E  HPY M ++
Sbjct: 336  MPYGQTMMHMPVLGVSHGHGQMGMSGPGGYHGYESHHPYNMLQQ 379


>ref|XP_002520534.1| DNA binding protein, putative [Ricinus communis]
            gi|223540376|gb|EEF41947.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 316

 Score =  224 bits (571), Expect = 5e-56
 Identities = 127/220 (57%), Positives = 157/220 (71%), Gaps = 9/220 (4%)
 Frame = -2

Query: 1357 EERVQEWETGLPSATDLTPLSQYLISPELASAFSITAEPFQTMLDVNRASQNTISSLRRQ 1178
            EERV++WE GLP+A DLTPLSQ LI PELASAFSI+ EP ++++DVNR SQNT+ SLR  
Sbjct: 23   EERVRDWEFGLPTADDLTPLSQPLIPPELASAFSISPEPHRSIIDVNRESQNTLLSLRSA 82

Query: 1177 NSGFGDKNFNSLCSFMEDRCGSDEPMXXXXXXXXXXXXXXEKRKIQSVENVEEADSALRM 998
               F    F S   +  +   + E                ++ K++ +++ EEADSALR 
Sbjct: 83   TGAFSSNKFKS---YNNNDDPTAETAVEEINNNTNNNNDTDQEKLRRIDSGEEADSALRT 139

Query: 997  ENLN--EDCSARTLKRARLVWTPQLHKRFVDVVGHLGIDNAVPKTIMQMMNVEGLTRENV 824
            ENL   +  +ARTLKR RLVWTPQLHKRFVDVV +LGI NAVPKTIMQ+MNVEGLTRENV
Sbjct: 140  ENLTGEDPATARTLKRPRLVWTPQLHKRFVDVVAYLGIKNAVPKTIMQLMNVEGLTRENV 199

Query: 823  ASHLQKYRLFVKR------QGPASSD-QLFASTPTVPQNM 725
            ASHLQKYRL++KR      +GP++SD QLFASTP VPQ++
Sbjct: 200  ASHLQKYRLYLKRMQGLSSEGPSASDNQLFASTP-VPQSL 238


Top