BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011702
         (1216 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...    63   2e-07
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]    63   2e-07
ref|XP_002278342.1| PREDICTED: F-box protein SKIP23 [Vitis vinif...    61   7e-07
ref|XP_004145529.1| PREDICTED: F-box protein SKIP23-like [Cucumi...    59   2e-06
ref|XP_002313690.1| f-box family protein [Populus trichocarpa] g...    59   3e-06

>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score = 62.8 bits (151), Expect = 2e-07
 Identities = 52/176 (29%), Positives = 82/176 (46%), Gaps = 31/176 (17%)
 Frame = +2

Query: 437 SSDSWSVLYQRMINFQDAVYYNDKFYSTEEAGALLSWDASGL--------IQ*RMY*NQQ 592
           S DSW+ L       +D +++   FY+  + G++   D SG         +  +   + Q
Sbjct: 195 SDDSWTFLEDAQSYAEDVIFHRGLFYAVNKYGSIAVCDVSGSSPRVSIIEMPQQFGGDLQ 254

Query: 593 ESCCA*EG*LEINRLLNFKY-----ASSRHY-------------GRKWKEVKNLC*RSLF 718
               + E  L + R L+  Y      +S  Y               +W+ V +L  R+LF
Sbjct: 255 YLVESGEELLLVTRYLDLTYDVEPDQTSLIYRTTRFQVCRLDLKAPRWEVVSSLGDRALF 314

Query: 719 LGKNSSFSLLASDFGSGCKPNCIYFTDERRQES-----DKLDMGIFNVGDASFEIL 871
           LG+N S SL + DF  GCK NCIY+TD+  +++      + D+GIFN+ D S E L
Sbjct: 315 LGENLSLSLSSVDF-PGCKGNCIYYTDDYSEDNYDGIGGEQDLGIFNLEDGSIEPL 369


>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score = 62.8 bits (151), Expect = 2e-07
 Identities = 52/176 (29%), Positives = 82/176 (46%), Gaps = 31/176 (17%)
 Frame = +2

Query: 437 SSDSWSVLYQRMINFQDAVYYNDKFYSTEEAGALLSWDASGL--------IQ*RMY*NQQ 592
           S DSW+ L       +D +++   FY+  + G++   D SG         +  +   + Q
Sbjct: 195 SDDSWTFLEDAQSYSEDVIFHRGLFYAVNKYGSIAVCDVSGSSPRVSIIEMPQQFGGDLQ 254

Query: 593 ESCCA*EG*LEINRLLNFKY-----ASSRHY-------------GRKWKEVKNLC*RSLF 718
               + E  L + R L+  Y      +S  Y               +W+ V +L  R+LF
Sbjct: 255 YLVESGEELLLVTRYLDLTYDVEXDQTSLIYRTTRFQVCRLDSKAPRWEVVSSLGDRALF 314

Query: 719 LGKNSSFSLLASDFGSGCKPNCIYFTDERRQES-----DKLDMGIFNVGDASFEIL 871
           LG+N S SL + DF  GCK NCIY+TD+  +++      + D+GIFN+ D S E L
Sbjct: 315 LGENLSLSLSSVDF-PGCKGNCIYYTDDYSEDNYDGIGGEQDLGIFNLEDGSIEPL 369


>ref|XP_002278342.1| PREDICTED: F-box protein SKIP23 [Vitis vinifera]
          Length = 375

 Score = 60.8 bits (146), Expect = 7e-07
 Identities = 47/149 (31%), Positives = 72/149 (48%), Gaps = 23/149 (15%)
 Frame = +2

Query: 470 MINFQDAVYYNDKFYSTEEAG-----ALLSWDASGLIQ*RMY*NQQESCCA*EG*LEI-- 628
           M +  D +++N +FY+ +  G     A+ S     LI   +    ++S     G L +  
Sbjct: 195 MPSCDDLIFFNGEFYAVDNTGRTVVVAIGSPPVLSLIADSVIGGNKKSLVESNGELLMVN 254

Query: 629 -----------NRLLNFKYASSRHYGRKWKEVKNLC*RSLFLGKNSSFSLLASDFGSGCK 775
                      NR + FK       G  W EV+NL  R LFLG+ S+FS +AS+F  GC+
Sbjct: 255 TYFDQGIHGIMNRAVRFKVFKLNQIGHMWVEVENLGDRILFLGEKSTFSAVASEF-CGCE 313

Query: 776 PNCIYFTDERRQESDKLD-----MGIFNV 847
            NCIY+T+     +D+ D     +GIFN+
Sbjct: 314 GNCIYYTNSFFFPNDQEDDAYTGIGIFNL 342


>ref|XP_004145529.1| PREDICTED: F-box protein SKIP23-like [Cucumis sativus]
           gi|449485151|ref|XP_004157083.1| PREDICTED: F-box
           protein SKIP23-like [Cucumis sativus]
          Length = 392

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 33/85 (38%), Positives = 51/85 (60%), Gaps = 5/85 (5%)
 Frame = +2

Query: 632 RLLNFKYASSRHYGRKWKEVKNLC*RSLFLGKNSSFSLLASDFGSGCKPNCIYFTD---- 799
           R + F+       G +W++V+NL   +LF+G NSS +  A+DFG     NCIY+TD    
Sbjct: 285 RTVRFEVFRMEWEGPRWEKVENLNEMALFVGGNSSMAFSAADFGE-ISGNCIYYTDDYSD 343

Query: 800 -ERRQESDKLDMGIFNVGDASFEIL 871
            + +++ ++ DMGIF + D SFE L
Sbjct: 344 SDYQEQGEEPDMGIFRLCDESFEPL 368


>ref|XP_002313690.1| f-box family protein [Populus trichocarpa]
           gi|222850098|gb|EEE87645.1| f-box family protein
           [Populus trichocarpa]
          Length = 410

 Score = 58.5 bits (140), Expect = 3e-06
 Identities = 51/185 (27%), Positives = 80/185 (43%), Gaps = 39/185 (21%)
 Frame = +2

Query: 410 LAVFLKPSSSSDSWSVLYQRMINFQDAVYYNDKFYSTEEAG--ALLSWDAS-GLIQ*RMY 580
           LA+F    S    W+++ +    F D + Y  +FY+ +  G   +++ D   GL+   ++
Sbjct: 185 LAMF---KSGDKRWTIINEMPSPFDDVIVYKGRFYAVDNTGRTVVVALDTDLGLVGDPVF 241

Query: 581 *NQQESCCA*EG*LEI----------------------------NRLLNFKYASSRHYGR 676
              ++     +G L +                             R + FK       G+
Sbjct: 242 GGDKKYLVESKGDLLLVDMYLSIDTDEGLSIGNDVVQDLVQYMSERTVRFKVFKLNEEGK 301

Query: 677 KWKEVKNLC*RSLFLGKNSSFSLLASDFGSGCKPNCIYFTDE---RRQESDK-----LDM 832
            W EVKNL  R LFLG +S+FS  AS+  SGCK NCI+F D     R+E D       D+
Sbjct: 302 SWIEVKNLEDRVLFLGDDSTFSASASEL-SGCKGNCIFFEDNFFYSREEGDDGSMIGRDI 360

Query: 833 GIFNV 847
           G+F +
Sbjct: 361 GVFEL 365