BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011701
         (428 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509949.1| Polygalacturonase precursor, putative [Ricin...   120   2e-25
ref|XP_004143871.1| PREDICTED: probable polygalacturonase-like [...   118   6e-25
emb|CBI34471.3| unnamed protein product [Vitis vinifera]              117   1e-24
ref|NP_194113.1| glycoside hydrolase family 28 protein / polygal...   114   6e-24
ref|XP_002867688.1| glycoside hydrolase family 28 protein [Arabi...   114   8e-24

>ref|XP_002509949.1| Polygalacturonase precursor, putative [Ricinus communis]
           gi|223549848|gb|EEF51336.1| Polygalacturonase precursor,
           putative [Ricinus communis]
          Length = 446

 Score =  120 bits (300), Expect = 2e-25
 Identities = 55/65 (84%), Positives = 61/65 (93%)
 Frame = +3

Query: 234 TCSGIVPMKYRNDAISITDFGGVGDGRTLNTKAFQEAIYRIEHLKRRGGTVLYIPQGVFL 413
           TCSGIVPM+YRND ISI DFGGVGDG+T+NTKAF+ AIYRI+HLKRRGGT+LYIP GVFL
Sbjct: 28  TCSGIVPMRYRNDKISIADFGGVGDGKTVNTKAFRAAIYRIQHLKRRGGTLLYIPPGVFL 87

Query: 414 TGSFN 428
           TGSFN
Sbjct: 88  TGSFN 92


>ref|XP_004143871.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
           gi|449501789|ref|XP_004161459.1| PREDICTED: probable
           polygalacturonase-like [Cucumis sativus]
          Length = 445

 Score =  118 bits (295), Expect = 6e-25
 Identities = 53/72 (73%), Positives = 63/72 (87%)
 Frame = +3

Query: 213 LVYGEMVTCSGIVPMKYRNDAISITDFGGVGDGRTLNTKAFQEAIYRIEHLKRRGGTVLY 392
           L   ++ TCSGIVPMKYRND ISI DFGG+GDGRTLNT+AF+ AIYRI+HL+RRGGT+LY
Sbjct: 20  LAVADLTTCSGIVPMKYRNDKISIADFGGIGDGRTLNTRAFRAAIYRIQHLRRRGGTLLY 79

Query: 393 IPQGVFLTGSFN 428
           IP GV+LT +FN
Sbjct: 80  IPPGVYLTETFN 91


>emb|CBI34471.3| unnamed protein product [Vitis vinifera]
          Length = 447

 Score =  117 bits (293), Expect = 1e-24
 Identities = 56/72 (77%), Positives = 63/72 (87%)
 Frame = +3

Query: 213 LVYGEMVTCSGIVPMKYRNDAISITDFGGVGDGRTLNTKAFQEAIYRIEHLKRRGGTVLY 392
           LV    VTCSGIVPM++RND ISI DFGGVGDG+TLNTKAF+ AIYRIEHL+RRGGT+LY
Sbjct: 22  LVLAGDVTCSGIVPMRHRNDVISIKDFGGVGDGKTLNTKAFRAAIYRIEHLRRRGGTLLY 81

Query: 393 IPQGVFLTGSFN 428
           IP GV+LT SFN
Sbjct: 82  IPPGVYLTESFN 93


>ref|NP_194113.1| glycoside hydrolase family 28 protein / polygalacturonase
           (pectinase) family protein [Arabidopsis thaliana]
           gi|4454051|emb|CAA23048.1| putative polygalacturonase
           [Arabidopsis thaliana] gi|7269231|emb|CAB81300.1|
           putative polygalacturonase [Arabidopsis thaliana]
           gi|17065242|gb|AAL32775.1| putative polygalacturonase
           [Arabidopsis thaliana] gi|22136230|gb|AAM91193.1|
           putative polygalacturonase [Arabidopsis thaliana]
           gi|332659410|gb|AEE84810.1| glycoside hydrolase family
           28 protein / polygalacturonase (pectinase) family
           protein [Arabidopsis thaliana]
          Length = 444

 Score =  114 bits (286), Expect = 6e-24
 Identities = 53/65 (81%), Positives = 60/65 (92%)
 Frame = +3

Query: 234 TCSGIVPMKYRNDAISITDFGGVGDGRTLNTKAFQEAIYRIEHLKRRGGTVLYIPQGVFL 413
           TCSGIVP++YR D ISITDFGGVGDGRT+NTKAF+ AIYRI+HLKRRGGT+LYIP GV+L
Sbjct: 27  TCSGIVPLRYRYDKISITDFGGVGDGRTVNTKAFRAAIYRIQHLKRRGGTLLYIPPGVYL 86

Query: 414 TGSFN 428
           T SFN
Sbjct: 87  TESFN 91


>ref|XP_002867688.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
           lyrata] gi|297313524|gb|EFH43947.1| glycoside hydrolase
           family 28 protein [Arabidopsis lyrata subsp. lyrata]
          Length = 444

 Score =  114 bits (285), Expect = 8e-24
 Identities = 54/71 (76%), Positives = 63/71 (88%), Gaps = 1/71 (1%)
 Frame = +3

Query: 219 YGEM-VTCSGIVPMKYRNDAISITDFGGVGDGRTLNTKAFQEAIYRIEHLKRRGGTVLYI 395
           YG+   TCSGIVP++YR D ISITD+GGVGDGRT+NTKAF+ AIYRI+HLKRRGGT+LYI
Sbjct: 21  YGDSEATCSGIVPLRYRYDKISITDYGGVGDGRTVNTKAFRAAIYRIQHLKRRGGTLLYI 80

Query: 396 PQGVFLTGSFN 428
           P GV+LT SFN
Sbjct: 81  PPGVYLTESFN 91