BLASTX nr result

ID: Coptis21_contig00011688 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011688
         (970 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002454431.1| hypothetical protein SORBIDRAFT_04g030830 [S...   264   3e-68
ref|XP_003570169.1| PREDICTED: myb family transcription factor A...   262   1e-67
gb|EEE61612.1| hypothetical protein OsJ_16029 [Oryza sativa Japo...   261   2e-67
gb|EEC77922.1| hypothetical protein OsI_17252 [Oryza sativa Indi...   260   3e-67
dbj|BAD07516.1| phosphate starvation response regulator-like [Or...   257   3e-66

>ref|XP_002454431.1| hypothetical protein SORBIDRAFT_04g030830 [Sorghum bicolor]
           gi|241934262|gb|EES07407.1| hypothetical protein
           SORBIDRAFT_04g030830 [Sorghum bicolor]
          Length = 279

 Score =  264 bits (674), Expect = 3e-68
 Identities = 144/251 (57%), Positives = 176/251 (70%), Gaps = 1/251 (0%)
 Frame = -2

Query: 918 GGIVLSRDPKPRLRWTAELHDRFVDAVTKLGGPDKATPKSVLRVMGLKGLTLYHLKSHLQ 739
           GG+VLSRDPKPRLRWT +LH+RFV+AVTKLGGPDKATPKSVLR+MG+KGLTLYHLKSHLQ
Sbjct: 19  GGVVLSRDPKPRLRWTPDLHERFVEAVTKLGGPDKATPKSVLRLMGMKGLTLYHLKSHLQ 78

Query: 738 KYRLGKQAQRETSLDQSKDS-AGSSEDLSYMNYQSATSTIAPRVNNEGEFQITENLRYQI 562
           KYRLGKQ++++T L+ S+ + A    + S     S  ST +   NN GE  + + L+YQI
Sbjct: 79  KYRLGKQSKKDTGLEASRGAFAAQGINFSTPVPPSIPSTAS---NNTGETPLADALKYQI 135

Query: 561 DVQRKLQEQLEVQRKLQTRIEAQGKYLQAILEKAQKSLSADLNNSEHLEATRDQLTDFNL 382
           +VQRKL EQLEVQ+KLQ RIEAQGKYLQ ILEKAQ +LS D     +LEATR QLTDFNL
Sbjct: 136 EVQRKLHEQLEVQKKLQMRIEAQGKYLQTILEKAQSNLSYDATGGANLEATRSQLTDFNL 195

Query: 381 ALSGLMENMTQVNEEERKEDTNEKNTCQYKKAHSSAFQLYHXXXXXXXXXXXXXXXXGSF 202
           ALSG M+N+TQV E++  E     +    + +++  FQLYH                   
Sbjct: 196 ALSGFMDNVTQVCEQKNGELAKAMSEDGLRASNNLGFQLYHHGVQDRDDVKCATDEGL-L 254

Query: 201 LFDLNINGNYE 169
           L DLNI G Y+
Sbjct: 255 LLDLNIRGGYD 265


>ref|XP_003570169.1| PREDICTED: myb family transcription factor APL-like [Brachypodium
           distachyon]
          Length = 281

 Score =  262 bits (669), Expect = 1e-67
 Identities = 150/278 (53%), Positives = 189/278 (67%), Gaps = 9/278 (3%)
 Frame = -2

Query: 921 SGGIVLSRDPKPRLRWTAELHDRFVDAVTKLGGPDKATPKSVLRVMGLKGLTLYHLKSHL 742
           +GG+VLSRDPKPRLRWT +LH+RFV+AVTKLGGPDKATPKSVLR+MG+KGLTLYHLKSHL
Sbjct: 14  AGGVVLSRDPKPRLRWTPDLHERFVEAVTKLGGPDKATPKSVLRLMGMKGLTLYHLKSHL 73

Query: 741 QKYRLGKQAQRETSLDQSKDSAGSSEDLSYMNYQSATSTIAPRV--NNEGEFQITENLRY 568
           QKYR+GKQ++++T  + S+ +A ++  +S   + SAT  + P    NN GE  + + LRY
Sbjct: 74  QKYRMGKQSKKDTGFETSR-AAFATHGIS---FSSATPPVVPSAGNNNMGETPLADALRY 129

Query: 567 QIDVQRKLQEQLEVQRKLQTRIEAQGKYLQAILEKAQKSLSADLNNSEHLEATRDQLTDF 388
           QI+VQRKL EQLEVQ+KLQ RIEAQGKYLQ ILEKAQK+L+ D + + +LEATR QLTDF
Sbjct: 130 QIEVQRKLHEQLEVQKKLQMRIEAQGKYLQTILEKAQKNLTYDSSAATNLEATRSQLTDF 189

Query: 387 NLALSGLMENMTQV---NEEERKEDTNEKNTCQYKKAHSSAFQLYHXXXXXXXXXXXXXX 217
           NLALSG M++ TQV   N  E  +  +E N     +A +  FQLYH              
Sbjct: 190 NLALSGFMDDATQVCEQNNGELAKVISEDNL----RAGNLGFQLYHGVQDAEDVKCTADE 245

Query: 216 XXGSFLFDLNINGNYEF----NGTNGSEFDTKIHTERR 115
                L DLNI G Y+     +G    + D  +   RR
Sbjct: 246 DL--LLLDLNIKGGYDHRLSSHGMRRGDADLTVGQHRR 281


>gb|EEE61612.1| hypothetical protein OsJ_16029 [Oryza sativa Japonica Group]
          Length = 279

 Score =  261 bits (667), Expect = 2e-67
 Identities = 144/275 (52%), Positives = 183/275 (66%), Gaps = 6/275 (2%)
 Frame = -2

Query: 921 SGGIVLSRDPKPRLRWTAELHDRFVDAVTKLGGPDKATPKSVLRVMGLKGLTLYHLKSHL 742
           S     +RDPKPRLRWT +LH+RFVDAVT+LGGPDKATPKSVLR+MG+KGLTLYHLKSHL
Sbjct: 11  SAAAAAARDPKPRLRWTPDLHERFVDAVTRLGGPDKATPKSVLRLMGMKGLTLYHLKSHL 70

Query: 741 QKYRLGKQAQRETSLDQSKDSAG--SSEDLSYMNYQSATSTIAPRVNNEGEFQITENLRY 568
           QKYRLG+Q+++   L+ +   +G  ++E +S+     A        NN GE  + + L+Y
Sbjct: 71  QKYRLGRQSKKSAGLELAVADSGEFTAEGISFS--IGAPPRNPAGGNNTGEIPLADALKY 128

Query: 567 QIDVQRKLQEQLEVQRKLQTRIEAQGKYLQAILEKAQKSLSADLNNSEHLEATRDQLTDF 388
           Q++VQRKLQEQLEVQ+KLQ RIEAQG+YL+ ILEKAQK++S D N S +L +TR Q+TD 
Sbjct: 129 QVEVQRKLQEQLEVQKKLQMRIEAQGRYLKEILEKAQKNISLDANGSANLSSTRSQITDI 188

Query: 387 NLALSGLMENMTQVNEE--ERKEDTNEKNTCQYKKAHSSAFQLYHXXXXXXXXXXXXXXX 214
           NLALSG M+N TQV EE  E  +  ++ N     K ++  FQLYH               
Sbjct: 189 NLALSGFMDNATQVQEENNELMKPISDDNL----KVNNLGFQLYHLGSQESKDVKCTPKT 244

Query: 213 XGSFLFDLNINGNYEFN--GTNGSEFDTKIHTERR 115
               L DLNI G YE +  G  G E D KI+ +RR
Sbjct: 245 EELLLLDLNIQGGYELSSRGMQGCELDLKINQQRR 279


>gb|EEC77922.1| hypothetical protein OsI_17252 [Oryza sativa Indica Group]
          Length = 282

 Score =  260 bits (665), Expect = 3e-67
 Identities = 143/269 (53%), Positives = 182/269 (67%), Gaps = 6/269 (2%)
 Frame = -2

Query: 903 SRDPKPRLRWTAELHDRFVDAVTKLGGPDKATPKSVLRVMGLKGLTLYHLKSHLQKYRLG 724
           +RDPKPRLRWT +LH+RFVDAVT+LGGPDKATPKSVLR+MG+KGLTLYHLKSHLQKYRLG
Sbjct: 20  TRDPKPRLRWTPDLHERFVDAVTRLGGPDKATPKSVLRLMGMKGLTLYHLKSHLQKYRLG 79

Query: 723 KQAQRETSLDQSKDSAG--SSEDLSYMNYQSATSTIAPRVNNEGEFQITENLRYQIDVQR 550
           +Q+++   L+ +   +G  ++E +S+     A        NN GE  + + L+YQ++VQR
Sbjct: 80  RQSKKSAGLELAVADSGEFTAEGISFS--IGAPPRNPAGGNNTGEIPLADALKYQVEVQR 137

Query: 549 KLQEQLEVQRKLQTRIEAQGKYLQAILEKAQKSLSADLNNSEHLEATRDQLTDFNLALSG 370
           KLQEQLEVQ+KLQ RIEAQG+YL+ ILEKAQK++S D N S +L +TR Q+TD NLALSG
Sbjct: 138 KLQEQLEVQKKLQMRIEAQGRYLKEILEKAQKNISLDANGSANLSSTRSQITDINLALSG 197

Query: 369 LMENMTQVNEE--ERKEDTNEKNTCQYKKAHSSAFQLYHXXXXXXXXXXXXXXXXGSFLF 196
            M+N TQV EE  E  +  ++ N     K ++  FQLYH                   L 
Sbjct: 198 FMDNATQVQEENNELMKPISDDNL----KVNNLGFQLYHLGSQESKDVKCTPKTEELLLL 253

Query: 195 DLNINGNYEFN--GTNGSEFDTKIHTERR 115
           DLNI G YE +  G  G E D KI+ +RR
Sbjct: 254 DLNIQGGYELSSRGMQGCELDLKINQQRR 282


>dbj|BAD07516.1| phosphate starvation response regulator-like [Oryza sativa Japonica
           Group] gi|41052977|dbj|BAD07887.1| phosphate starvation
           response regulator-like [Oryza sativa Japonica Group]
           gi|125583365|gb|EAZ24296.1| hypothetical protein
           OsJ_08048 [Oryza sativa Japonica Group]
          Length = 284

 Score =  257 bits (657), Expect = 3e-66
 Identities = 150/277 (54%), Positives = 181/277 (65%), Gaps = 7/277 (2%)
 Frame = -2

Query: 924 MSGGIVLSRDPKPRLRWTAELHDRFVDAVTKLGGPDKATPKSVLRVMGLKGLTLYHLKSH 745
           +  G+VLSRDPKPRLRWT +LH+RFV+AVTKLGGPDKATPKSVLR+MG+KGLTLYHLKSH
Sbjct: 16  VGAGVVLSRDPKPRLRWTPDLHERFVEAVTKLGGPDKATPKSVLRLMGMKGLTLYHLKSH 75

Query: 744 LQKYRLGKQAQRETSLDQSKDSAGSSEDLSYMNYQSATSTIAPRVNNEGEFQITENLRYQ 565
           LQKYRLGKQ +++T L+ S+  A ++  +S+ +    T   A   NN GE  + + LRYQ
Sbjct: 76  LQKYRLGKQNKKDTGLEASR-GAFAAHGISFASAAPPTIPSAEN-NNAGETPLADALRYQ 133

Query: 564 IDVQRKLQEQLEVQRKLQTRIEAQGKYLQAILEKAQKSLSADLNNSEHLEATRDQLTDFN 385
           I+VQRKL EQLEVQ+KLQ RIEAQGKYLQ ILEKAQ +LS D   + +LEATR QLTDFN
Sbjct: 134 IEVQRKLHEQLEVQKKLQMRIEAQGKYLQTILEKAQNNLSYDATGTANLEATRTQLTDFN 193

Query: 384 LALSGLMENMTQV---NEEERKEDTNEKNTCQYKKAHSSAFQLYHXXXXXXXXXXXXXXX 214
           LALSG M N++QV   N  E  +  +E N     +  +  FQLYH               
Sbjct: 194 LALSGFMNNVSQVCEQNNGELAKAISEDNL----RTTNLGFQLYHGIQDSDDVKCSQDEG 249

Query: 213 XGSFLFDLNING----NYEFNGTNGSEFDTKIHTERR 115
               L DLNI G    +   N   G E   KI   RR
Sbjct: 250 L--LLLDLNIKGGGYDHLSSNAMRGGESGLKISQHRR 284


Top