BLASTX nr result

ID: Coptis21_contig00011639 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011639
         (1095 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284106.1| PREDICTED: branched-chain-amino-acid aminotr...   505   e-141
ref|XP_002516560.1| D-alanine aminotransferase, putative [Ricinu...   479   e-133
ref|XP_003526478.1| PREDICTED: branched-chain-amino-acid aminotr...   467   e-129
ref|XP_003551118.1| PREDICTED: branched-chain-amino-acid aminotr...   464   e-128
ref|NP_001234878.1| 4-amino-4-deoxychorismate lyase [Solanum lyc...   457   e-126

>ref|XP_002284106.1| PREDICTED: branched-chain-amino-acid aminotransferase-like protein 3,
            chloroplastic [Vitis vinifera]
            gi|296081877|emb|CBI20882.3| unnamed protein product
            [Vitis vinifera]
          Length = 388

 Score =  505 bits (1301), Expect = e-141
 Identities = 255/362 (70%), Positives = 297/362 (82%), Gaps = 3/362 (0%)
 Frame = +2

Query: 11   PTSEIKFPAKLTDFSSSLRRNLAAFDSGYKCFGLKVDGRSLWESRVFHNSGQIEEFIN-- 184
            P +   +PAK +  S     +   F   +   GL    RS+    V  NS Q E  ++  
Sbjct: 8    PFASTAYPAKFSHHSL----DSPVFTPRFSVLGLGF--RSISHGVVVRNSNQAEPLVDST 61

Query: 185  -VSDVPLLSSSEVFERLKEDREKRKGKQQFLAMYSSVFGGITTDPTTMVIPMDDHMVHRG 361
             ++DVPLLS  E  ERLK  +E +K KQQ+LAMYSS+FGGITTD   MVIPMDDHMVHRG
Sbjct: 62   QIADVPLLSCLEAIERLKTSQENQKSKQQYLAMYSSIFGGITTDKAAMVIPMDDHMVHRG 121

Query: 362  HGVFDTAAIMDGYLYELDQHVDRFLRSASMAKISVPFDRESIKNILIQTVSASKCRQGSL 541
            HGVFDTAAIMDGYLYELDQH+DRFLRSASMAKI+ PFDRESI+ ILIQTVSASKCR+GSL
Sbjct: 122  HGVFDTAAIMDGYLYELDQHLDRFLRSASMAKINPPFDRESIRGILIQTVSASKCRKGSL 181

Query: 542  RYWLSVGPGDFQLSPSGCKQSALYAIVIQDKTPLGREGVKVWTSTVPMKPPQFATMKSVN 721
            RYWLS GPGDFQLSPSGC+QSALYAIVIQD +P  ++G+KV TS+VP+K PQFATMKSVN
Sbjct: 182  RYWLSAGPGDFQLSPSGCQQSALYAIVIQDLSPFDQKGIKVVTSSVPIKTPQFATMKSVN 241

Query: 722  YLPNVLSKMEAEEKGGFAAIWLDEDGYIAEGPNMNVAFVTKENELLMPSFDKILSGCTAR 901
            YLPNVLSKMEAEE G +AAIWLD+DG+IAEGPNMNVAFVTKE EL+MP FDKILSGCTA+
Sbjct: 242  YLPNVLSKMEAEENGSYAAIWLDDDGFIAEGPNMNVAFVTKEKELVMPHFDKILSGCTAK 301

Query: 902  RVLSLSEGLVREGRISGIRVGNVTMEEGKQACEMMLIGSGILVRPVLQWDDQIIGDGKVG 1081
            RVL+L+EGL+REG++ GIRVGN+++EEGK+A EMMLIGSG+LVRPVLQWD+ +IGDGK G
Sbjct: 302  RVLALAEGLMREGKLQGIRVGNLSVEEGKKADEMMLIGSGVLVRPVLQWDEHVIGDGKEG 361

Query: 1082 PV 1087
            PV
Sbjct: 362  PV 363


>ref|XP_002516560.1| D-alanine aminotransferase, putative [Ricinus communis]
            gi|223544380|gb|EEF45901.1| D-alanine aminotransferase,
            putative [Ricinus communis]
          Length = 318

 Score =  479 bits (1233), Expect = e-133
 Identities = 230/291 (79%), Positives = 266/291 (91%)
 Frame = +2

Query: 215  EVFERLKEDREKRKGKQQFLAMYSSVFGGITTDPTTMVIPMDDHMVHRGHGVFDTAAIMD 394
            +  ERL+ +REK KGKQQFLAMYSS+FGGITTDP  MVIP+DDHMVHRGHGVFDTAAIMD
Sbjct: 4    KAMERLRTNREKHKGKQQFLAMYSSIFGGITTDPAAMVIPLDDHMVHRGHGVFDTAAIMD 63

Query: 395  GYLYELDQHVDRFLRSASMAKISVPFDRESIKNILIQTVSASKCRQGSLRYWLSVGPGDF 574
            G+LYELDQH++R L SASMAKI++PF+RESI+ ILIQTV+ASKC++GSLRYWLS GPGDF
Sbjct: 64   GHLYELDQHLNRILSSASMAKINLPFNRESIRKILIQTVTASKCQKGSLRYWLSAGPGDF 123

Query: 575  QLSPSGCKQSALYAIVIQDKTPLGREGVKVWTSTVPMKPPQFATMKSVNYLPNVLSKMEA 754
            QLSPSGC+Q ALYAIVIQD + L  +GVKV TS+VP+KPP+FATMKSVNYLPNVLSKMEA
Sbjct: 124  QLSPSGCQQPALYAIVIQDHSQLDSKGVKVVTSSVPIKPPKFATMKSVNYLPNVLSKMEA 183

Query: 755  EEKGGFAAIWLDEDGYIAEGPNMNVAFVTKENELLMPSFDKILSGCTARRVLSLSEGLVR 934
            EE G FAAIWLD DG+IAEGPNMNVAFVTKE +L+MP FDKILSGCTARRVL+L+EGLV+
Sbjct: 184  EENGAFAAIWLDNDGFIAEGPNMNVAFVTKEKDLIMPYFDKILSGCTARRVLALAEGLVK 243

Query: 935  EGRISGIRVGNVTMEEGKQACEMMLIGSGILVRPVLQWDDQIIGDGKVGPV 1087
            EG++ G++VGN+T+EEGKQA EMMLIGSGILVRP +QWD+QIIGDGK GP+
Sbjct: 244  EGKLHGVKVGNLTIEEGKQADEMMLIGSGILVRPAVQWDEQIIGDGKEGPI 294


>ref|XP_003526478.1| PREDICTED: branched-chain-amino-acid aminotransferase-like protein 3,
            chloroplastic-like [Glycine max]
          Length = 345

 Score =  467 bits (1202), Expect = e-129
 Identities = 228/303 (75%), Positives = 260/303 (85%)
 Frame = +2

Query: 185  VSDVPLLSSSEVFERLKEDREKRKGKQQFLAMYSSVFGGITTDPTTMVIPMDDHMVHRGH 364
            +SDVPLLS SE  E+LK  REK KGKQQFLAMYSS+FGGITTDP  MVIPMDDHMVHRGH
Sbjct: 20   ISDVPLLSCSEAMEKLKSFREKVKGKQQFLAMYSSIFGGITTDPAAMVIPMDDHMVHRGH 79

Query: 365  GVFDTAAIMDGYLYELDQHVDRFLRSASMAKISVPFDRESIKNILIQTVSASKCRQGSLR 544
            GVFDT AI+DGYLYELDQH+DRF+RSAS AKI+ P+DR +I+ ILIQTVSASKCR G+LR
Sbjct: 80   GVFDTTAIIDGYLYELDQHLDRFIRSASTAKINPPYDRGTIRGILIQTVSASKCRNGTLR 139

Query: 545  YWLSVGPGDFQLSPSGCKQSALYAIVIQDKTPLGREGVKVWTSTVPMKPPQFATMKSVNY 724
            YWLS GPGDF LSPSGC +S LYAI IQD +P+   GVKV TS VP+KPPQFAT KSVNY
Sbjct: 140  YWLSAGPGDFDLSPSGCHKSCLYAITIQDLSPINFRGVKVVTSNVPIKPPQFATTKSVNY 199

Query: 725  LPNVLSKMEAEEKGGFAAIWLDEDGYIAEGPNMNVAFVTKENELLMPSFDKILSGCTARR 904
            LPNVLSKMEAEE G F  IWLD DG++AEGP+MNVAFVTKE EL+MP  DKILSGCTA+R
Sbjct: 200  LPNVLSKMEAEELGAFVGIWLDSDGFVAEGPSMNVAFVTKEKELVMPLCDKILSGCTAKR 259

Query: 905  VLSLSEGLVREGRISGIRVGNVTMEEGKQACEMMLIGSGILVRPVLQWDDQIIGDGKVGP 1084
            VL+L+E LVREG++ GIR+ NV++EEGK A EMML+GSGI+VR V+QWD+QIIG GK GP
Sbjct: 260  VLTLAESLVREGKLCGIRMKNVSVEEGKNADEMMLLGSGIMVRSVVQWDEQIIGCGKEGP 319

Query: 1085 VGQ 1093
            + Q
Sbjct: 320  ITQ 322


>ref|XP_003551118.1| PREDICTED: branched-chain-amino-acid aminotransferase-like protein 3,
            chloroplastic-like [Glycine max]
          Length = 382

 Score =  464 bits (1193), Expect = e-128
 Identities = 231/318 (72%), Positives = 268/318 (84%), Gaps = 4/318 (1%)
 Frame = +2

Query: 152  HNSGQ--IEEFINVSDVPLLSSSEVFERLKEDREKRKGKQQFLAMYSSVFGGITTDPTTM 325
            H SG    +    VS VPLL+S++ +E+LK  RE  KGKQQFLAMYSS+FGGITTDP  M
Sbjct: 42   HQSGPSLCDSKTQVSRVPLLTSTQAYEKLKTFRENIKGKQQFLAMYSSIFGGITTDPAAM 101

Query: 326  VIPMDDHMVHRGHGVFDTAAIMDGYLYELDQHVDRFLRSASMAKISVPFDRESIKNILIQ 505
            VIPMDDHMVHRGHGVFDTAAIMDGYLYELDQH+DRFLRSASM+KI  PFDR SI+ ILIQ
Sbjct: 102  VIPMDDHMVHRGHGVFDTAAIMDGYLYELDQHLDRFLRSASMSKIDPPFDRGSIRRILIQ 161

Query: 506  TVSASKCRQGSLRYWLSVGPGDFQLSPSGCKQSALYAIVIQDKTPLGR--EGVKVWTSTV 679
            TVSASKCR+GSLRYWLS GPGDFQLSPS C +S+LYAIVIQD +P      GVKV TS++
Sbjct: 162  TVSASKCRKGSLRYWLSAGPGDFQLSPSCCHRSSLYAIVIQDLSPSSPNFRGVKVVTSSI 221

Query: 680  PMKPPQFATMKSVNYLPNVLSKMEAEEKGGFAAIWLDEDGYIAEGPNMNVAFVTKENELL 859
            P+K P+FA  KSVNYLPNVLSK+EAEE G F  IWLD +G++AEGPNMNVAFVTK+ EL+
Sbjct: 222  PIKHPKFAITKSVNYLPNVLSKVEAEEAGAFVGIWLDGEGFVAEGPNMNVAFVTKDKELI 281

Query: 860  MPSFDKILSGCTARRVLSLSEGLVREGRISGIRVGNVTMEEGKQACEMMLIGSGILVRPV 1039
            MP FDKILSGCTA+RVL+L+E L+REG++ GIRV  VT+EEGKQA EMML+GSG+LV PV
Sbjct: 282  MPHFDKILSGCTAKRVLTLAESLLREGKLKGIRVKTVTVEEGKQADEMMLLGSGVLVCPV 341

Query: 1040 LQWDDQIIGDGKVGPVGQ 1093
            +QWD+Q+IGDGK GP+ Q
Sbjct: 342  VQWDEQVIGDGKEGPITQ 359


>ref|NP_001234878.1| 4-amino-4-deoxychorismate lyase [Solanum lycopersicum]
            gi|50345543|gb|AAT74744.1| 4-amino-4-deoxychorismate
            lyase [Solanum lycopersicum]
          Length = 395

 Score =  457 bits (1177), Expect = e-126
 Identities = 230/325 (70%), Positives = 266/325 (81%), Gaps = 2/325 (0%)
 Frame = +2

Query: 125  RSLWESRVFHNSGQIEE--FINVSDVPLLSSSEVFERLKEDREKRKGKQQFLAMYSSVFG 298
            R L  S VF NS    +       DVPLLS SEV ER++  RE  K KQ +LAMYSSVFG
Sbjct: 48   RPLTRSNVFKNSNFSSDGQCCPTFDVPLLSCSEVIERMRTSREGYKTKQLYLAMYSSVFG 107

Query: 299  GITTDPTTMVIPMDDHMVHRGHGVFDTAAIMDGYLYELDQHVDRFLRSASMAKISVPFDR 478
            GITTD   MVIPMDDHMVHRGHGVFDTAAIMDGYLYELDQH+DRFL SA+MAKI +PFDR
Sbjct: 108  GITTDTAAMVIPMDDHMVHRGHGVFDTAAIMDGYLYELDQHLDRFLGSATMAKIQIPFDR 167

Query: 479  ESIKNILIQTVSASKCRQGSLRYWLSVGPGDFQLSPSGCKQSALYAIVIQDKTPLGREGV 658
            ESI+ ILI+TVS SKCR+GSLRYW S GPGDFQLS SGC Q+ LYAIVI+D++P    G+
Sbjct: 168  ESIRQILIRTVSVSKCRKGSLRYWFSAGPGDFQLSSSGCHQATLYAIVIKDQSPPDHNGI 227

Query: 659  KVWTSTVPMKPPQFATMKSVNYLPNVLSKMEAEEKGGFAAIWLDEDGYIAEGPNMNVAFV 838
            KV TS++P+KP QFA MKSVNYLPN LSKMEAEE   +AAIWLD DG++AEGPNMNVAFV
Sbjct: 228  KVVTSSIPIKPLQFAVMKSVNYLPNALSKMEAEENDAYAAIWLDGDGFVAEGPNMNVAFV 287

Query: 839  TKENELLMPSFDKILSGCTARRVLSLSEGLVREGRISGIRVGNVTMEEGKQACEMMLIGS 1018
            TKE +LLMP FDKILSGCTA+RVL L+E LV+EG++ GIRV NV++E+ K+A EMMLIGS
Sbjct: 288  TKEKDLLMPCFDKILSGCTAKRVLVLAENLVKEGKLRGIRVENVSVEDAKRADEMMLIGS 347

Query: 1019 GILVRPVLQWDDQIIGDGKVGPVGQ 1093
            GILVR V+QWD++IIG+G+ GPV Q
Sbjct: 348  GILVRSVVQWDEEIIGNGREGPVTQ 372


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