BLASTX nr result

ID: Coptis21_contig00011638 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011638
         (575 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315444.1| predicted protein [Populus trichocarpa] gi|2...   134   8e-30
ref|XP_003591770.1| RNA-binding protein [Medicago truncatula] gi...   131   7e-29
emb|CBI35241.3| unnamed protein product [Vitis vinifera]              130   1e-28
ref|XP_002264164.1| PREDICTED: uncharacterized protein LOC100265...   130   1e-28
ref|XP_003556270.1| PREDICTED: uncharacterized protein LOC100791...   126   3e-27

>ref|XP_002315444.1| predicted protein [Populus trichocarpa] gi|222864484|gb|EEF01615.1|
           predicted protein [Populus trichocarpa]
          Length = 311

 Score =  134 bits (338), Expect = 8e-30
 Identities = 74/130 (56%), Positives = 82/130 (63%)
 Frame = -1

Query: 569 IKTKRLFVTGLSFYTSEKTLRAAFEGYGELVEVKIIMDKISKRSKGYAFIXXXXXXXXXX 390
           ++TK+LF+TGLSFYTSEKTLRAAFEG+GELVEVKIIMDKISKRSKGYAF+          
Sbjct: 216 VRTKKLFITGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFV---------- 265

Query: 389 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALKEMNGKIINGWMIVVDVAKTN 210
                                                ALKEMNGKIINGWMIVVDVAK+N
Sbjct: 266 ---------------------------KYTTEEAASSALKEMNGKIINGWMIVVDVAKSN 298

Query: 209 PPKYSRGSPR 180
           PP+YSRG PR
Sbjct: 299 PPRYSRGRPR 308


>ref|XP_003591770.1| RNA-binding protein [Medicago truncatula]
           gi|355480818|gb|AES62021.1| RNA-binding protein
           [Medicago truncatula]
          Length = 284

 Score =  131 bits (330), Expect = 7e-29
 Identities = 73/132 (55%), Positives = 82/132 (62%)
 Frame = -1

Query: 572 AIKTKRLFVTGLSFYTSEKTLRAAFEGYGELVEVKIIMDKISKRSKGYAFIXXXXXXXXX 393
           ++KTK+LFVTGLSFYTSEKTLRAAFEG+GELVEVK+I+DKISKRSKGYAFI         
Sbjct: 188 SVKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKVIIDKISKRSKGYAFI--------- 238

Query: 392 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALKEMNGKIINGWMIVVDVAKT 213
                                                 ALKEMNGKIINGWMIVVDVAKT
Sbjct: 239 ----------------------------EYTTEEAASAALKEMNGKIINGWMIVVDVAKT 270

Query: 212 NPPKYSRGSPRP 177
            PP+Y++G  RP
Sbjct: 271 TPPRYNKGHARP 282


>emb|CBI35241.3| unnamed protein product [Vitis vinifera]
          Length = 315

 Score =  130 bits (328), Expect = 1e-28
 Identities = 76/131 (58%), Positives = 78/131 (59%)
 Frame = -1

Query: 569 IKTKRLFVTGLSFYTSEKTLRAAFEGYGELVEVKIIMDKISKRSKGYAFIXXXXXXXXXX 390
           IKTK+LFVTGLSFYTSEKTLR AFEG+GELVEVKIIMDKISKRSKGYAFI          
Sbjct: 220 IKTKKLFVTGLSFYTSEKTLRGAFEGFGELVEVKIIMDKISKRSKGYAFI---------- 269

Query: 389 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALKEMNGKIINGWMIVVDVAKTN 210
                                                ALKEMNGKIINGWMIVVDVAK  
Sbjct: 270 ---------------------------EYTTEEAASAALKEMNGKIINGWMIVVDVAKPT 302

Query: 209 PPKYSRGSPRP 177
           P KYSR  PRP
Sbjct: 303 PQKYSRSRPRP 313


>ref|XP_002264164.1| PREDICTED: uncharacterized protein LOC100265361 [Vitis vinifera]
          Length = 409

 Score =  130 bits (328), Expect = 1e-28
 Identities = 76/131 (58%), Positives = 78/131 (59%)
 Frame = -1

Query: 569 IKTKRLFVTGLSFYTSEKTLRAAFEGYGELVEVKIIMDKISKRSKGYAFIXXXXXXXXXX 390
           IKTK+LFVTGLSFYTSEKTLR AFEG+GELVEVKIIMDKISKRSKGYAFI          
Sbjct: 314 IKTKKLFVTGLSFYTSEKTLRGAFEGFGELVEVKIIMDKISKRSKGYAFI---------- 363

Query: 389 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALKEMNGKIINGWMIVVDVAKTN 210
                                                ALKEMNGKIINGWMIVVDVAK  
Sbjct: 364 ---------------------------EYTTEEAASAALKEMNGKIINGWMIVVDVAKPT 396

Query: 209 PPKYSRGSPRP 177
           P KYSR  PRP
Sbjct: 397 PQKYSRSRPRP 407


>ref|XP_003556270.1| PREDICTED: uncharacterized protein LOC100791652 [Glycine max]
          Length = 386

 Score =  126 bits (316), Expect = 3e-27
 Identities = 71/126 (56%), Positives = 77/126 (61%)
 Frame = -1

Query: 569 IKTKRLFVTGLSFYTSEKTLRAAFEGYGELVEVKIIMDKISKRSKGYAFIXXXXXXXXXX 390
           +KTK+LFVTGLSFYTSEKTLRAAFEG+GELVEVK+IMDKISKRSKGYAF+          
Sbjct: 294 LKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKVIMDKISKRSKGYAFV---------- 343

Query: 389 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALKEMNGKIINGWMIVVDVAKTN 210
                                                ALKEMNGKIINGWMIVVDVAK N
Sbjct: 344 ---------------------------EYTTEEAASAALKEMNGKIINGWMIVVDVAKPN 376

Query: 209 PPKYSR 192
           PP+Y R
Sbjct: 377 PPRYHR 382


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