BLASTX nr result

ID: Coptis21_contig00011622 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011622
         (944 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22382.3| unnamed protein product [Vitis vinifera]              209   1e-51
ref|XP_002266063.2| PREDICTED: probable lysine-specific demethyl...   204   2e-50
ref|XP_002521976.1| transcription factor, putative [Ricinus comm...   186   5e-45
ref|XP_002325772.1| jumonji domain protein [Populus trichocarpa]...   185   1e-44
ref|XP_002319654.1| jumonji domain protein [Populus trichocarpa]...   183   6e-44

>emb|CBI22382.3| unnamed protein product [Vitis vinifera]
          Length = 1178

 Score =  209 bits (531), Expect = 1e-51
 Identities = 136/302 (45%), Positives = 178/302 (58%), Gaps = 30/302 (9%)
 Frame = +2

Query: 2    EVCGKEGILAKALKRRVEMEHTRREYLC-SSYSVKMDKSFDTANGRECFVCMYDLHLSAV 178
            +VCGK+GILAK LK RVE EHTRREYLC SS ++KM+ +FD  N REC VC++DLHLSA 
Sbjct: 530  QVCGKDGILAKTLKARVETEHTRREYLCGSSRALKMEANFDAINERECIVCLFDLHLSAA 589

Query: 179  GCQCCPEKFACLYHAKQLCACALSERTLLFRYAIRDLNVLVEALEGKLSAIHRWAKLDLG 358
            GC C P+++ACL HAKQLC+CA + +  LFRY I +LN+LVEALEGKLSA++RWA+LDLG
Sbjct: 590  GCHCSPDRYACLNHAKQLCSCAWNTKFFLFRYDISELNILVEALEGKLSAVYRWARLDLG 649

Query: 359  LALSTFVAKDKSQSPG----------------PDGKPFCFLQ---GAKQEDGLLDPISSR 481
            LALS++++KD  Q PG                 + KP   L+   GA+    LLD    +
Sbjct: 650  LALSSYISKDNLQIPGLIGKLSQSSEGTVLNEQNSKPVSSLKKVGGAENATALLDLEGRK 709

Query: 482  IPTS-----SRLCQEFKEPSVHVKESTSPSIDGFCTELQKGTSNDTKSQNNYSPVMEETP 646
            +P+S     ++  Q  KE SV     ++PS+         GT     SQ +    M  T 
Sbjct: 710  VPSSRNRMGNQRFQFTKEESV----LSAPSL---------GTPVCHPSQED----MYNTE 752

Query: 647  LNISFRGEADVNKFVESGNTNVILLSDDEYE---GPVRHSPRYA--TGDSSKFKKLSDSH 811
               S + E + N F   G+ NVILLSDDE E    PV    +       S  F++L+DS 
Sbjct: 753  NLASVKSELERNTF--PGHGNVILLSDDEGEELKKPVLDIAKETPFAKHSEFFERLTDSD 810

Query: 812  MK 817
             K
Sbjct: 811  AK 812


>ref|XP_002266063.2| PREDICTED: probable lysine-specific demethylase JMJ14-like [Vitis
            vinifera]
          Length = 1271

 Score =  204 bits (520), Expect = 2e-50
 Identities = 131/308 (42%), Positives = 176/308 (57%), Gaps = 36/308 (11%)
 Frame = +2

Query: 2    EVCGKEGILAKALKRRVEMEHTRREYLC-SSYSVKMDKSFDTANGRECFVCMYDLHLSAV 178
            +VCGK+GILAK LK RVE EHTRREYLC SS ++KM+ +FD  N REC VC++DLHLSA 
Sbjct: 569  QVCGKDGILAKTLKARVETEHTRREYLCGSSRALKMEANFDAINERECIVCLFDLHLSAA 628

Query: 179  GCQCCPEKFACLYHAKQLCACALSERTLLFRYAIRDLNVLVEALEGKLSAIHRWAKLDLG 358
            GC C P+++ACL HAKQLC+CA + +  LFRY I +LN+LVEALEGKLSA++RWA+LDLG
Sbjct: 629  GCHCSPDRYACLNHAKQLCSCAWNTKFFLFRYDISELNILVEALEGKLSAVYRWARLDLG 688

Query: 359  LALSTFVAKDKSQSPGPDGKPFCFLQGAKQEDGLLDPISSR-----------IPTSSR-- 499
            LALS++++KD  Q PG  GK     +G    +    P+SS            IP +S   
Sbjct: 689  LALSSYISKDNLQIPGLIGKLSQSSEGTVLNEQNSKPVSSLKKVGGAENATGIPLNSTGN 748

Query: 500  ----LCQEFKEPSVHVKESTSPSIDGFCTELQKGTSNDTKSQNNYSPVMEETPL------ 649
                L  + ++PS  + +     +      +       TK ++  S     TP+      
Sbjct: 749  IGETLLPQKEKPSKALLDLEGRKVPSSRNRMGNQRFQFTKEESVLSAPSLGTPVCHPSQE 808

Query: 650  ------NI-SFRGEADVNKFVESGNTNVILLSDDEYE---GPVRHSPRYA--TGDSSKFK 793
                  N+ S + E + N F   G+ NVILLSDDE E    PV    +       S  F+
Sbjct: 809  DMYNTENLASVKSELERNTF--PGHGNVILLSDDEGEELKKPVLDIAKETPFAKHSEFFE 866

Query: 794  KLSDSHMK 817
            +L+DS  K
Sbjct: 867  RLTDSDAK 874


>ref|XP_002521976.1| transcription factor, putative [Ricinus communis]
            gi|223538780|gb|EEF40380.1| transcription factor,
            putative [Ricinus communis]
          Length = 1202

 Score =  186 bits (473), Expect = 5e-45
 Identities = 106/249 (42%), Positives = 152/249 (61%), Gaps = 5/249 (2%)
 Frame = +2

Query: 2    EVCGKEGILAKALKRRVEMEHTRREYLC-SSYSVKMDKSFDTANGRECFVCMYDLHLSAV 178
            +VCGK+GIL+KALK RVE+E  RRE+LC SS ++KM+ +FD  + REC  C++DLHLSA 
Sbjct: 565  DVCGKDGILSKALKERVEIERVRREFLCKSSQALKMESNFDATSERECIFCLFDLHLSAA 624

Query: 179  GCQCCPEKFACLYHAKQLCACALSERTLLFRYAIRDLNVLVEALEGKLSAIHRWAKLDLG 358
            GC+C P+K+ACL HA  +C+C  S +  LFRY I +LN+LVEALEGKLSA++RWA+LDLG
Sbjct: 625  GCRCSPDKYACLNHANHMCSCGGSTKFFLFRYDISELNILVEALEGKLSAVYRWARLDLG 684

Query: 359  LALSTFVAKDKSQ----SPGPDGKPFCFLQGAKQEDGLLDPISSRIPTSSRLCQEFKEPS 526
            LAL+++++KD  Q    S  P+ K    ++     D L D  S  IP    +    +E +
Sbjct: 685  LALTSYISKDNMQDCKLSYLPEVKALEEVRSKSSIDFLKDFESKGIPREITMTSIIEEQN 744

Query: 527  VHVKESTSPSIDGFCTELQKGTSNDTKSQNNYSPVMEETPLNISFRGEADVNKFVESGNT 706
            + +K   + S   F T+L       +++  +Y+  +           E    K     + 
Sbjct: 745  LDLKVHKAGSTH-FPTKLTTSICQLSQADTSYAGDVSLV--------ECRSKKRPILNHD 795

Query: 707  NVILLSDDE 733
            N+ILLSDDE
Sbjct: 796  NIILLSDDE 804


>ref|XP_002325772.1| jumonji domain protein [Populus trichocarpa]
           gi|222862647|gb|EEF00154.1| jumonji domain protein
           [Populus trichocarpa]
          Length = 756

 Score =  185 bits (470), Expect = 1e-44
 Identities = 87/143 (60%), Positives = 113/143 (79%), Gaps = 1/143 (0%)
 Frame = +2

Query: 2   EVCGKEGILAKALKRRVEMEHTRREYLC-SSYSVKMDKSFDTANGRECFVCMYDLHLSAV 178
           ++CGK+GILAKA K RVE EH RR++LC SS ++KM+  FD  + REC VC++DLHLSAV
Sbjct: 442 DMCGKDGILAKAFKERVETEHVRRQFLCNSSPALKMESDFDATSERECSVCLFDLHLSAV 501

Query: 179 GCQCCPEKFACLYHAKQLCACALSERTLLFRYAIRDLNVLVEALEGKLSAIHRWAKLDLG 358
           GC C P+K+ACL HAKQLC+C    +  LFRY I +LN+LVEALEGKLSA++RWA+LDLG
Sbjct: 502 GCHCSPDKYACLNHAKQLCSCVSGAKFFLFRYDISELNILVEALEGKLSAVYRWARLDLG 561

Query: 359 LALSTFVAKDKSQSPGPDGKPFC 427
           LAL++FV+KD ++    +GK  C
Sbjct: 562 LALTSFVSKDNAE----EGKLSC 580


>ref|XP_002319654.1| jumonji domain protein [Populus trichocarpa]
           gi|222858030|gb|EEE95577.1| jumonji domain protein
           [Populus trichocarpa]
          Length = 923

 Score =  183 bits (464), Expect = 6e-44
 Identities = 85/133 (63%), Positives = 107/133 (80%), Gaps = 1/133 (0%)
 Frame = +2

Query: 2   EVCGKEGILAKALKRRVEMEHTRREYLC-SSYSVKMDKSFDTANGRECFVCMYDLHLSAV 178
           +VCGK GILAKA K RVE E  RR++LC SS ++KM+  FD  + REC VC++DLHLSA 
Sbjct: 442 DVCGKNGILAKAFKERVETERVRRQFLCNSSPTLKMESDFDATSERECSVCLFDLHLSAA 501

Query: 179 GCQCCPEKFACLYHAKQLCACALSERTLLFRYAIRDLNVLVEALEGKLSAIHRWAKLDLG 358
           GC C P+KFACL HAKQLC+CA   +  LFRY I +LN+L+EALEGKLSA++RWA+LDLG
Sbjct: 502 GCHCSPDKFACLTHAKQLCSCAWGAKFFLFRYDISELNILLEALEGKLSAVYRWARLDLG 561

Query: 359 LALSTFVAKDKSQ 397
           LAL++FV+KD +Q
Sbjct: 562 LALTSFVSKDNTQ 574


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