BLASTX nr result

ID: Coptis21_contig00011616 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011616
         (770 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306167.1| predicted protein [Populus trichocarpa] gi|2...    62   2e-07
ref|XP_002312982.1| predicted protein [Populus trichocarpa] gi|2...    58   2e-06

>ref|XP_002306167.1| predicted protein [Populus trichocarpa] gi|222849131|gb|EEE86678.1|
           predicted protein [Populus trichocarpa]
          Length = 138

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 41/138 (29%), Positives = 52/138 (37%), Gaps = 4/138 (2%)
 Frame = -3

Query: 618 MGWFLRDRRGPEWKXXXXXXXXXXXXXXXXXXXXVFAIVILFMWLPKYMDYNHHYRTELE 439
           M WF   RRGPEWK                    +F IVI  +WL  Y  Y      +L 
Sbjct: 1   MEWFYPKRRGPEWKQGWTGQTVASMSTPPFPLLAIFGIVISLLWLSHYTGYE----AQLR 56

Query: 438 KTENNFHIFXXXXXXXXXXXVKCLSGNXXXXXXXXXXXXXXDGCS----PWGVAIXXXXX 271
            +  N  IF           +   S N                 S    PWG+A+     
Sbjct: 57  HSAVNLQIFLFLLPILLILFMASYSTNWLLYYRLRDSPPDSAPRSTSSFPWGIAVFVVLL 116

Query: 270 XVMISYQSSFHSRWFKPL 217
            +++SYQSSFHS+WF PL
Sbjct: 117 LMLLSYQSSFHSKWFGPL 134


>ref|XP_002312982.1| predicted protein [Populus trichocarpa] gi|222849390|gb|EEE86937.1|
           predicted protein [Populus trichocarpa]
          Length = 138

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 39/135 (28%), Positives = 52/135 (38%), Gaps = 4/135 (2%)
 Frame = -3

Query: 618 MGWFLRDRRGPEWKXXXXXXXXXXXXXXXXXXXXVFAIVILFMWLPKYMDYNHHYRTELE 439
           M WF   RRGPEWK                    +F IVI  +WL  Y  Y    + +L 
Sbjct: 1   MEWFYPKRRGPEWKQGWTGQTMGSVSSPPLPLLAIFGIVISLLWLSHYTGY----KAQLH 56

Query: 438 KTENNFHIFXXXXXXXXXXXVKCLSGNXXXXXXXXXXXXXXD----GCSPWGVAIXXXXX 271
            +  N  IF           +   S N              D    G  PWG+AI     
Sbjct: 57  HSAINLQIFLVLLPILLILFMASYSTNWLLYYRLRSSQHDSDPRSSGSFPWGIAIFVVVL 116

Query: 270 XVMISYQSSFHSRWF 226
            +++SY+S+FHS+WF
Sbjct: 117 LMLLSYRSTFHSKWF 131


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