BLASTX nr result

ID: Coptis21_contig00011610 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011610
         (703 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284793.1| PREDICTED: uncharacterized protein LOC100261...   114   2e-23
emb|CAN65725.1| hypothetical protein VITISV_004448 [Vitis vinifera]   114   2e-23
ref|XP_002309595.1| predicted protein [Populus trichocarpa] gi|2...   111   2e-22
ref|XP_002514343.1| conserved hypothetical protein [Ricinus comm...    97   3e-18
ref|XP_003526429.1| PREDICTED: uncharacterized protein LOC100805...    73   5e-11

>ref|XP_002284793.1| PREDICTED: uncharacterized protein LOC100261242 [Vitis vinifera]
          Length = 143

 Score =  114 bits (285), Expect = 2e-23
 Identities = 68/149 (45%), Positives = 95/149 (63%), Gaps = 6/149 (4%)
 Frame = -1

Query: 634 MASSSTCCLIPRSPTSIAQANSS----KPNQLSRHDVKVGSWRKQCFVGMTCMVLASEMM 467
           MA S+ CCL    P S +  +SS    K +Q+S    K  S + +C VG+TCM+++ EM 
Sbjct: 1   MAFSAGCCLNLSPPPSGSSPSSSRSSTKTDQVS-WPRKENSLKSKCVVGLTCMIISLEMS 59

Query: 466 PLLGGDCCAVAEDLQIHVEEPNKKGTKWSDKRACPAWNINSLEIIVPENLPRPSSHRKSE 287
            L+ G+  A+A+DLQ+  E   K+ T+WSDKR CP W +NSLE IVPENLPRPS+ R+ E
Sbjct: 60  NLMSGEGLAIAQDLQLIGER--KEVTRWSDKRMCPPWQLNSLETIVPENLPRPSTRRRWE 117

Query: 286 SITFSKLSQSNSRVKIIIR--TQGNCFSM 206
           S+  S  + +   VKI+ R  T+ +CFSM
Sbjct: 118 SVGHSTTAPA---VKILFRAHTKSDCFSM 143


>emb|CAN65725.1| hypothetical protein VITISV_004448 [Vitis vinifera]
          Length = 143

 Score =  114 bits (285), Expect = 2e-23
 Identities = 68/149 (45%), Positives = 94/149 (63%), Gaps = 6/149 (4%)
 Frame = -1

Query: 634 MASSSTCCLIPRSPTSIAQANSS----KPNQLSRHDVKVGSWRKQCFVGMTCMVLASEMM 467
           MA S+ CCL    P S +   SS    K +Q+S    K  S + +C VG+TCM+++ EM 
Sbjct: 1   MAFSAGCCLNLSPPPSGSSPRSSRSSTKTDQVS-WPRKENSLKSKCLVGLTCMIISLEMS 59

Query: 466 PLLGGDCCAVAEDLQIHVEEPNKKGTKWSDKRACPAWNINSLEIIVPENLPRPSSHRKSE 287
            L+ G+  A+A+DLQ+  E   K+ T+WSDKR CP W +NSLE IVPENLPRPS+ R+ E
Sbjct: 60  NLMSGEGLAIAQDLQLIGER--KEVTRWSDKRMCPPWQLNSLETIVPENLPRPSTRRRWE 117

Query: 286 SITFSKLSQSNSRVKIIIR--TQGNCFSM 206
           S+  S  + +   VKI+ R  T+ +CFSM
Sbjct: 118 SVGHSTTAPA---VKILFRAHTKSDCFSM 143


>ref|XP_002309595.1| predicted protein [Populus trichocarpa] gi|222855571|gb|EEE93118.1|
           predicted protein [Populus trichocarpa]
          Length = 144

 Score =  111 bits (277), Expect = 2e-22
 Identities = 64/145 (44%), Positives = 86/145 (59%), Gaps = 2/145 (1%)
 Frame = -1

Query: 634 MASSSTCCLIPRSPTSIAQANSSKPNQLSRHDVKVGSWRKQCFVGMTCMVLASEMMP-LL 458
           MA  +TC L    P S +   SS          K   WR +C +G  CM++  EM   L+
Sbjct: 1   MAIRTTCRLNLSPPGSGSTLPSSSTKNSQVAWFKNEKWRNRCVLGAACMIIGLEMGGGLV 60

Query: 457 GGDCCAVAEDLQIHVE-EPNKKGTKWSDKRACPAWNINSLEIIVPENLPRPSSHRKSESI 281
           GG+  A+A ++Q+ VE + N  G +WSDKR CP W+ NSLE IVPENLPRPS+HR+ E +
Sbjct: 61  GGEDLAMAREMQVAVESKENLNGPRWSDKRMCPPWSRNSLETIVPENLPRPSAHRRWEEV 120

Query: 280 TFSKLSQSNSRVKIIIRTQGNCFSM 206
            FSK +    +V +I R+ G CFSM
Sbjct: 121 RFSKNNAPAVKVIVIKRSNG-CFSM 144


>ref|XP_002514343.1| conserved hypothetical protein [Ricinus communis]
           gi|223546799|gb|EEF48297.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 155

 Score = 97.1 bits (240), Expect = 3e-18
 Identities = 58/155 (37%), Positives = 84/155 (54%), Gaps = 12/155 (7%)
 Frame = -1

Query: 634 MASSSTCCLI-----PRSPTSIAQANSSKPNQLSRHDVKVGSWRKQCFVGMTCMVLASEM 470
           MA +++CCL      P S +S+  ++S+          K   WR QC +GM CM++  EM
Sbjct: 1   MAITTSCCLNMNIPPPTSASSLPSSSSTTKPTAQASWFKNEKWRSQCVLGMACMIIGLEM 60

Query: 469 MPLLGGDC--CAVAEDLQIHVEEPNKKGTK-WSDKRACPAWNINSLEIIVPENLPRPSSH 299
             L+  +      AE+    VE   K  T+ WSDKR CP W +NSLE IVPENLPRPS+ 
Sbjct: 61  DNLVNEETNLAMAAENSSSVVELKVKPKTRRWSDKRMCPPWRLNSLETIVPENLPRPSAR 120

Query: 298 RKSESITFSKLSQSNSRVKII----IRTQGNCFSM 206
           R+ E+  +SK+  + +  + +    I    NCF+M
Sbjct: 121 RRWEATGYSKIDPAPAPARKVSVKSIMIMDNCFTM 155


>ref|XP_003526429.1| PREDICTED: uncharacterized protein LOC100805091 [Glycine max]
          Length = 146

 Score = 73.2 bits (178), Expect = 5e-11
 Identities = 50/150 (33%), Positives = 72/150 (48%), Gaps = 12/150 (8%)
 Frame = -1

Query: 619 TCCLIPRSPTSIAQANSSKPNQLSRHDVK-VGSWRKQCFVGMTCMVLASEMMPLLGGDCC 443
           T C +   P +  Q  S  P       VK    W++QC V     ++  EM      +  
Sbjct: 3   TSCFLSLPPFTSNQP-SIPPKHPQLSSVKNEACWKRQCVVMGVASIIGLEMC-----NSV 56

Query: 442 AVAEDL----------QIHVEEPNKKGTKWSDKRACPAWNINSLEIIVPENLPRPSSHRK 293
           A+A +           Q+     +  G KWS+KR CP W  NSLE IVPENLPRPS+ R+
Sbjct: 57  AMAHEAIEIKTMPFSNQVVSNSNSYGGAKWSEKRMCPPWQGNSLETIVPENLPRPSARRR 116

Query: 292 SESITFSKLSQSNSRVKIIIRT-QGNCFSM 206
            E++  S  +       II+++ +G+CFSM
Sbjct: 117 YEAVRSSSKTAPPLSAPIIVQSNKGSCFSM 146


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