BLASTX nr result

ID: Coptis21_contig00011598 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011598
         (229 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540310.1| PREDICTED: RING-box protein 1a-like isoform ...    38   7e-06

>ref|XP_003540310.1| PREDICTED: RING-box protein 1a-like isoform 2 [Glycine max]
          Length = 131

 Score = 38.1 bits (87), Expect(2) = 7e-06
 Identities = 15/20 (75%), Positives = 17/20 (85%)
 Frame = +3

Query: 165 FLNIIVDTCAICRNDIMDLC 224
           F +I+VD CAICRN IMDLC
Sbjct: 57  FADIVVDNCAICRNHIMDLC 76



 Score = 36.6 bits (83), Expect(2) = 7e-06
 Identities = 14/19 (73%), Positives = 17/19 (89%)
 Frame = +1

Query: 43 KPKKFDIRKWNEVSL*AWG 99
          KPK+F+I+KWN VSL AWG
Sbjct: 28 KPKRFEIKKWNAVSLWAWG 46


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