BLASTX nr result

ID: Coptis21_contig00011588 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011588
         (1539 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271949.1| PREDICTED: transcription factor TCP20-like [...   320   8e-85
ref|XP_002297855.1| predicted protein [Populus trichocarpa] gi|2...   298   2e-78
ref|XP_002512905.1| transcription factor, putative [Ricinus comm...   295   2e-77
ref|XP_002328883.1| predicted protein [Populus trichocarpa] gi|2...   293   6e-77
ref|XP_002514876.1| transcription factor, putative [Ricinus comm...   293   8e-77

>ref|XP_002271949.1| PREDICTED: transcription factor TCP20-like [Vitis vinifera]
          Length = 296

 Score =  320 bits (819), Expect = 8e-85
 Identities = 177/298 (59%), Positives = 203/298 (68%), Gaps = 8/298 (2%)
 Frame = -1

Query: 1416 VDPNSTKQP*EVTKLLKHHPQQEMEENKQTETQDLQISVTEKDEGMKKQLAPKRSSNKDR 1237
            +DP  +KQP EV   L   PQ  M ENK  E +D QI + +K+EG KKQLAPKRSSNKDR
Sbjct: 1    MDPKGSKQPQEVPNFLSL-PQPNMGENKPAEVKDFQIVIADKEEG-KKQLAPKRSSNKDR 58

Query: 1236 HTKVDGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQSEPSIIAATGTGTIPXX 1057
            HTKV+GRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQ+EPSIIAATGTGTIP  
Sbjct: 59   HTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPAS 118

Query: 1056 XXXXXXXXXXXXXXXXXXGFHTKISEL-GHEIGS-NSRTNWTMVGGGLGRSQVTTSLWPS 883
                              G H KI EL G  IGS +SRT+W MVG  LGR  V T LWP 
Sbjct: 119  ALAAAGGSVSQQGTSISAGLHQKIDELGGSSIGSGSSRTSWAMVGANLGRPHVATGLWPP 178

Query: 882  VSGYGPGFLPSSGPPTLNHTSEGLNYLPKFGIHGFEMPSSNIGPMSLSSIISGNNQQIPG 703
            VSG+  GF  SSGP T N  +E  NYL K    GF++P++N+GPMS +SI+ G+NQQ+PG
Sbjct: 179  VSGF--GFQSSSGPSTTNLGNESSNYLQKIAFPGFDLPATNLGPMSFTSILGGSNQQLPG 236

Query: 702  LELGLSQDGHVGVLSPQALNQYYQQMAQSRA------VAMHXXXXXXXQHDDEDSQGS 547
            LELGLSQDGH+GVL+ QAL+Q YQQM Q+R          H           +DSQGS
Sbjct: 237  LELGLSQDGHIGVLNSQALSQIYQQMGQARVHQQQQHQHQHQHQHQQQPPAKDDSQGS 294


>ref|XP_002297855.1| predicted protein [Populus trichocarpa] gi|222845113|gb|EEE82660.1|
            predicted protein [Populus trichocarpa]
          Length = 302

 Score =  298 bits (764), Expect = 2e-78
 Identities = 160/269 (59%), Positives = 184/269 (68%), Gaps = 4/269 (1%)
 Frame = -1

Query: 1338 NKQ-TETQDLQISVTEKDEGMKKQLAPKRSSNKDRHTKVDGRGRRIRMPALCAARIFQLT 1162
            NKQ  E +DLQI +  +D   KKQLAPKRSSNKDRH KVDGRGRRIRMPALCAARIFQLT
Sbjct: 34   NKQPAEIKDLQIMIENRDHN-KKQLAPKRSSNKDRHKKVDGRGRRIRMPALCAARIFQLT 92

Query: 1161 RELGHKSDGETIQWLLQQSEPSIIAATGTGTIPXXXXXXXXXXXXXXXXXXXXGFHTKIS 982
            RELG+KSDGETIQWLLQQ+EPSIIAATGTGT P                    G HTK+ 
Sbjct: 93   RELGNKSDGETIQWLLQQAEPSIIAATGTGTFPASALAVAGASVSEQGNSVSTGLHTKME 152

Query: 981  ELGHEI-GSNSRTNWTMVGGGLGRSQVTTSLWPSVSGYGPGFLPSSGPPTLNHTSEGLNY 805
             LG  + GS  RTNWTM+   LGRS V + +WPSV G G GF+P+SG  T N  +E    
Sbjct: 153  GLGPAVVGSRDRTNWTMMNTNLGRSNVASGVWPSVGGIGSGFVPNSGQSTSNFGNENSTT 212

Query: 804  LPKFGIHGFEMPSSNIGPMSLSSIISGNNQQIPGLELGLSQDGHVGVLSPQALNQYYQQM 625
            LPK+G HG E P+ N+G MS  S+ SG NQQ PGLELGLSQDGH G+ +PQALN + QQM
Sbjct: 213  LPKYGFHGVEFPNINMGLMSFYSMFSGTNQQFPGLELGLSQDGHGGMFNPQALNPFCQQM 272

Query: 624  AQSRAV--AMHXXXXXXXQHDDEDSQGSR 544
             Q R V  +++        HD +DSQGSR
Sbjct: 273  VQGRGVLNSLNQEQQQEQPHDKDDSQGSR 301


>ref|XP_002512905.1| transcription factor, putative [Ricinus communis]
            gi|223547916|gb|EEF49408.1| transcription factor,
            putative [Ricinus communis]
          Length = 320

 Score =  295 bits (755), Expect = 2e-77
 Identities = 174/320 (54%), Positives = 201/320 (62%), Gaps = 30/320 (9%)
 Frame = -1

Query: 1416 VDPNST--KQP*EVTKLLKH----------HPQQE-----------MEENKQTETQDLQI 1306
            +DP S+  K P E+   L H           PQQE           M ENK  E +D QI
Sbjct: 1    MDPKSSNSKNPHELPNFLTHPPQPALQQQQQPQQEQQHQNQKQQTNMGENKPAEIKDFQI 60

Query: 1305 SVTEKDEGMKKQLAPKRSSNKDRHTKVDGRGRRIRMPALCAARIFQLTRELGHKSDGETI 1126
             + +K+E  KKQLAPKRSSNKDRHTKV+GRGRRIRMPALCAARIFQLTRELGHKSDGETI
Sbjct: 61   VIADKEE-QKKQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETI 119

Query: 1125 QWLLQQSEPSIIAATGTGTIPXXXXXXXXXXXXXXXXXXXXGFHTKISELGHE---IGSN 955
            QWLLQQ+EPSIIAATGTGTIP                    G H KI +LG       SN
Sbjct: 120  QWLLQQAEPSIIAATGTGTIPASALVAAGGSVSQQGTSLSAGLHQKIDDLGGSSSITSSN 179

Query: 954  SRTNWTMVGGGLGRSQ--VTTSLWPSVSGYG-PGFLPSSGPPTLNHTSEGLNYLPKFGIH 784
            SRT+W MVGG LGR     TT LWP V G+G      ++GP T N  +E  +YL K G  
Sbjct: 180  SRTSWAMVGGNLGRPHHVATTGLWPPVGGFGFQSSSTTTGPVTSNLGNESSSYLQKIGFP 239

Query: 783  GFEMPSSNIGPMSLSSIISG-NNQQIPGLELGLSQDGHVGVLSPQALNQYYQQMAQSRAV 607
            GF++P +N+GPMS +SI+ G +NQQIPGLELGLSQDGH+GVL+ QA +Q YQQM Q+R  
Sbjct: 240  GFDLPGNNMGPMSFTSILGGTSNQQIPGLELGLSQDGHIGVLNSQAFSQIYQQMGQARVQ 299

Query: 606  AMHXXXXXXXQHDDEDSQGS 547
              H          D DSQGS
Sbjct: 300  HQHQHQHQQNPAKD-DSQGS 318


>ref|XP_002328883.1| predicted protein [Populus trichocarpa] gi|222839313|gb|EEE77650.1|
            predicted protein [Populus trichocarpa]
          Length = 321

 Score =  293 bits (751), Expect = 6e-77
 Identities = 169/278 (60%), Positives = 190/278 (68%), Gaps = 8/278 (2%)
 Frame = -1

Query: 1356 QQEMEENKQTETQDLQISVTEKDEGMKKQLAPKRSSNKDRHTKVDGRGRRIRMPALCAAR 1177
            Q  M ENK  E +D QI V +K+E  KKQLAPKRSSNKDRHTKV+GRGRRIRMPALCAAR
Sbjct: 52   QPNMGENKAAEIKDFQIVVADKEE-QKKQLAPKRSSNKDRHTKVEGRGRRIRMPALCAAR 110

Query: 1176 IFQLTRELGHKSDGETIQWLLQQSEPSIIAATGTGTIPXXXXXXXXXXXXXXXXXXXXGF 997
            IFQLTRELGHKSDGETIQWLLQQ+EPSIIAATGTGTIP                    G 
Sbjct: 111  IFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASALAAAGGAISQQGASLSAGL 170

Query: 996  HTKISELGHEIGSNSRTNWTMVGGGLGRSQVTTS--LWPSVSGYGPGFLPSS---GPPTL 832
            H KI ++G    S+ RT+W M+GG LGR    TS  LWP V GY  GF  SS   GP T 
Sbjct: 171  HQKIDDIGE--SSSRRTSWAMLGGNLGRPHQVTSAGLWPPVGGY--GFQSSSNTTGPSTT 226

Query: 831  NHTSE---GLNYLPKFGIHGFEMPSSNIGPMSLSSIISGNNQQIPGLELGLSQDGHVGVL 661
            N  SE   G +YL K G  GF+MP +NIGPMSL+SI+   +QQ+PGLELGLSQDGH+GVL
Sbjct: 227  NIVSEGGGGSSYLQKNGFSGFDMPGNNIGPMSLTSILGVGSQQLPGLELGLSQDGHIGVL 286

Query: 660  SPQALNQYYQQMAQSRAVAMHXXXXXXXQHDDEDSQGS 547
            SPQAL+Q YQQM Q+R V  H           +DSQGS
Sbjct: 287  SPQALSQIYQQMGQAR-VQQHQQQNP----SKDDSQGS 319


>ref|XP_002514876.1| transcription factor, putative [Ricinus communis]
            gi|223545927|gb|EEF47430.1| transcription factor,
            putative [Ricinus communis]
          Length = 302

 Score =  293 bits (750), Expect = 8e-77
 Identities = 152/275 (55%), Positives = 182/275 (66%), Gaps = 4/275 (1%)
 Frame = -1

Query: 1356 QQEMEENKQTETQDLQISVTEKDEGMKKQLAPKRSSNKDRHTKVDGRGRRIRMPALCAAR 1177
            +     +K  E +D QI +  KD+  KKQLAPKRSSNKDRH KVDGRGRRIRMPALCAAR
Sbjct: 28   ENSSSSSKTAEIKDFQIMIANKDDN-KKQLAPKRSSNKDRHKKVDGRGRRIRMPALCAAR 86

Query: 1176 IFQLTRELGHKSDGETIQWLLQQSEPSIIAATGTGTIPXXXXXXXXXXXXXXXXXXXXGF 997
            IFQLTRELGHKSDGETIQWLLQQ+EPSIIAATGTGTIP                    G 
Sbjct: 87   IFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASALAAAGASVSQQGNSVSAGL 146

Query: 996  HTKISELGHEIGSNSRTNWTMVGGGLGRSQVTTSLWP-SVSGYGPGFLPSSGPPTLNHTS 820
            H+K+  +G  +GS  R NWTM+   LGR  VT  +WP SV G G G++ +S    +N  +
Sbjct: 147  HSKMEGIGPSVGSRDRANWTMMNSNLGRCNVTNGMWPSSVGGIGAGYISNSSQSAMNFGN 206

Query: 819  EGLNYLPKFGIHGFEMPSSNIGPMSLSSIISGNNQQIPGLELGLSQDGHVGVLSPQALNQ 640
            E  N LPKFG HG E+P+ N+G MS  S+ +  NQQ+PGLELGLSQDGH GV++ QAL+Q
Sbjct: 207  ESANALPKFGFHGVELPNINMGLMSFYSMFNATNQQVPGLELGLSQDGHTGVMNSQALSQ 266

Query: 639  YYQQMAQSRA---VAMHXXXXXXXQHDDEDSQGSR 544
            +YQQM Q+R      +          D +DSQGSR
Sbjct: 267  FYQQMGQNRTGLNSLVQQQQHQQQPPDKDDSQGSR 301


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