BLASTX nr result
ID: Coptis21_contig00011577
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00011577
(3323 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003613325.1| Resistance protein [Medicago truncatula] gi|... 73 4e-17
ref|XP_003613323.1| NBS-LRR disease resistance-like protein [Med... 70 1e-16
ref|XP_003613511.1| NBS resistance protein [Medicago truncatula]... 70 3e-16
ref|XP_003613508.1| Resistance protein [Medicago truncatula] gi|... 68 4e-16
ref|XP_003517872.1| PREDICTED: disease resistance protein RGA2-l... 67 4e-16
>ref|XP_003613325.1| Resistance protein [Medicago truncatula]
gi|355514660|gb|AES96283.1| Resistance protein [Medicago
truncatula]
Length = 499
Score = 73.2 bits (178), Expect(2) = 4e-17
Identities = 56/179 (31%), Positives = 84/179 (46%)
Frame = -1
Query: 878 LSICPXXXXXXXXXXXLAQLVYKDEMAVNHFETRIWVCVSDDFGVKRFTKLIIESLTNQP 699
LS+ P LAQ+V+ E V HFE RIWVCVS+DF +KR TK IIE+ +
Sbjct: 191 LSVYPVVGLGGLGKTTLAQVVFNHEKVVKHFELRIWVCVSEDFSLKRMTKGIIEAASGHA 250
Query: 698 CDPMPLEPIYAKPPQRIVEREEISPHTG*CLE*GCQGLEQSELLTIMRGERKFDYLTTHL 519
C+ + LEP+ K ++ R+ + G + ++ + + G+ +TT L
Sbjct: 251 CEDLDLEPLQRKLLD-LLRRKRYLLVLDDVWDDGQENWQRLKSVLACGGKGASVLVTTRL 309
Query: 518 *LIVDSLRHQTVITDSVTCTINLTILLNSFSESFCLSLFK*HAFYTGNDETPDLVKIGK 342
+ + T+ + L+ S++ C L K AF DE PDLV IGK
Sbjct: 310 PKVAAIM--GTMPSHD----------LSMLSDTDCWELIKQRAFGPNEDERPDLVVIGK 356
Score = 43.9 bits (102), Expect(2) = 4e-17
Identities = 23/43 (53%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Frame = -3
Query: 342 IGLEIVRKCDGVPLAVKALGGLLSDERKGK-WEAVRDNKLCDL 217
IG EIV+KC GVPLA KALG L +R+ K W V+++ L L
Sbjct: 354 IGKEIVKKCGGVPLAAKALGSFLRFKREEKEWRYVKESNLWSL 396
>ref|XP_003613323.1| NBS-LRR disease resistance-like protein [Medicago truncatula]
gi|355514658|gb|AES96281.1| NBS-LRR disease
resistance-like protein [Medicago truncatula]
Length = 1228
Score = 70.1 bits (170), Expect(2) = 1e-16
Identities = 34/72 (47%), Positives = 44/72 (61%)
Frame = -1
Query: 878 LSICPXXXXXXXXXXXLAQLVYKDEMAVNHFETRIWVCVSDDFGVKRFTKLIIESLTNQP 699
LS+ P LAQ+V+ E VN+FE RIWVCVS+DF +KR TK IIES +
Sbjct: 191 LSVYPIVGLGGLGKTTLAQIVFNHEKVVNYFELRIWVCVSEDFSLKRMTKAIIESTSGHA 250
Query: 698 CDPMPLEPIYAK 663
C+ + LEP+ K
Sbjct: 251 CEDLELEPLQRK 262
Score = 45.4 bits (106), Expect(2) = 1e-16
Identities = 18/42 (42%), Positives = 29/42 (69%)
Frame = -2
Query: 670 MQNHLRELLKGKKFLLILDDVWSEDVKDWNKVNCLLLCVEKG 545
+Q L LL+ K++LL+LDDVW +D ++W ++ +L C KG
Sbjct: 259 LQRKLLNLLQRKRYLLVLDDVWDDDQENWQRLRFVLACGGKG 300
>ref|XP_003613511.1| NBS resistance protein [Medicago truncatula]
gi|355514846|gb|AES96469.1| NBS resistance protein
[Medicago truncatula]
Length = 1071
Score = 69.7 bits (169), Expect(2) = 3e-16
Identities = 58/186 (31%), Positives = 83/186 (44%), Gaps = 25/186 (13%)
Frame = -1
Query: 824 QLVYKDEMAVNHFETRIWVCVSDDFGVKRFTKLIIESLTNQPCDPMPLEPIYAKPPQRIV 645
QL++ E VNHFE RIWVCVS+DF +KR TK IIES + C+ + LEP+
Sbjct: 209 QLIFNHERVVNHFELRIWVCVSEDFSLKRMTKAIIESASGHACEDLDLEPL--------- 259
Query: 644 EREEISPHTG*CLE*GCQGLEQSELLTIMRGERKFDYLTTHL*LIVDSL---------RH 492
Q +LL +++G+R YL L++D + R
Sbjct: 260 ---------------------QRKLLDLLKGKR---YL-----LVLDDVWDDEQENWQRL 290
Query: 491 QTVIT-----DSVTCTINLTIL-----------LNSFSESFCLSLFK*HAFYTGNDETPD 360
+ V+ SV T L + L+ S++ CL L K AF ++E +
Sbjct: 291 KYVLACGGKGASVLVTTRLPKVAAIMGTVPPHDLSLLSDNDCLDLLKQRAFGPNDEEREE 350
Query: 359 LVKIGK 342
LV IGK
Sbjct: 351 LVVIGK 356
Score = 44.3 bits (103), Expect(2) = 3e-16
Identities = 24/43 (55%), Positives = 31/43 (72%), Gaps = 1/43 (2%)
Frame = -3
Query: 342 IGLEIVRKCDGVPLAVKALGGLLSDERKG-KWEAVRDNKLCDL 217
IG EIV+KC GVPLA ALG LL +R+ +W V+++KL DL
Sbjct: 354 IGKEIVKKCRGVPLAAMALGSLLRFKREEIEWLNVKESKLWDL 396
>ref|XP_003613508.1| Resistance protein [Medicago truncatula]
gi|355514843|gb|AES96466.1| Resistance protein [Medicago
truncatula]
Length = 1125
Score = 67.8 bits (164), Expect(2) = 4e-16
Identities = 34/77 (44%), Positives = 45/77 (58%)
Frame = -1
Query: 893 NNQNRLSICPXXXXXXXXXXXLAQLVYKDEMAVNHFETRIWVCVSDDFGVKRFTKLIIES 714
+ Q LS+ P LAQLV+ + VNHFE +IWVCVS+DF +KR TK IIE
Sbjct: 190 SEQEDLSVYPIVGLGGLGKTTLAQLVFNHDKIVNHFELKIWVCVSEDFTLKRMTKAIIEG 249
Query: 713 LTNQPCDPMPLEPIYAK 663
T + C+ + LE + K
Sbjct: 250 ATKKSCEDLDLELLQRK 266
Score = 45.8 bits (107), Expect(2) = 4e-16
Identities = 17/42 (40%), Positives = 31/42 (73%)
Frame = -2
Query: 670 MQNHLRELLKGKKFLLILDDVWSEDVKDWNKVNCLLLCVEKG 545
+Q L++LL+ K++LL+LDDVW++ ++W ++ +L C KG
Sbjct: 263 LQRKLQDLLRRKRYLLVLDDVWNDKQENWQRLKSVLACGGKG 304
>ref|XP_003517872.1| PREDICTED: disease resistance protein RGA2-like [Glycine max]
Length = 899
Score = 67.4 bits (163), Expect(2) = 4e-16
Identities = 33/69 (47%), Positives = 42/69 (60%)
Frame = -1
Query: 878 LSICPXXXXXXXXXXXLAQLVYKDEMAVNHFETRIWVCVSDDFGVKRFTKLIIESLTNQP 699
LS+ P LAQL++ E VNHFE RIWVCVS+DF +KR TK IIE+ T
Sbjct: 165 LSVYPIVGLSGLGKTTLAQLIFNCERVVNHFELRIWVCVSEDFSLKRMTKAIIEATTGHA 224
Query: 698 CDPMPLEPI 672
+ + LEP+
Sbjct: 225 SEDLDLEPL 233
Score = 46.2 bits (108), Expect(2) = 4e-16
Identities = 18/42 (42%), Positives = 30/42 (71%)
Frame = -2
Query: 670 MQNHLRELLKGKKFLLILDDVWSEDVKDWNKVNCLLLCVEKG 545
+Q L++LL+ K++LL+LDDVW E ++W ++ +L C KG
Sbjct: 233 LQRRLQDLLQRKRYLLVLDDVWDEVQENWQRLKSVLACGAKG 274