BLASTX nr result
ID: Coptis21_contig00011559
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00011559
(2007 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002267140.1| PREDICTED: scarecrow-like protein 4-like [Vi... 578 e-162
ref|XP_002521601.1| Chitin-inducible gibberellin-responsive prot... 544 e-152
emb|CBI17529.3| unnamed protein product [Vitis vinifera] 525 e-146
ref|XP_002327806.1| GRAS family transcription factor [Populus tr... 511 e-142
emb|CAN74537.1| hypothetical protein VITISV_023717 [Vitis vinifera] 510 e-142
>ref|XP_002267140.1| PREDICTED: scarecrow-like protein 4-like [Vitis vinifera]
Length = 616
Score = 578 bits (1491), Expect = e-162
Identities = 329/587 (56%), Positives = 392/587 (66%), Gaps = 45/587 (7%)
Frame = +2
Query: 68 LGATNHHQFSLNQWSGSHTQYPTSXXXXXXXXXXLLPDQYPIVGNVTEIGESALPFEQTT 247
LG N F LN W+ + T+ D + + G + GE F
Sbjct: 36 LGGVN--SFCLNPWTTTPHTMSTAPALGYGLAGAGFSDPFQVAGTA-DAGEGGFQFAHLE 92
Query: 248 --STEFRYGNAEIGG--EFDSDEWIMESIMCGAGGSESNS------------EFTLCGTD 379
ST FR+ + GG EFDSDEW M+S+M G +ES++ + TL G D
Sbjct: 93 HHSTGFRFSDFSGGGGGEFDSDEW-MDSLMGGGDSTESSNLPSGCDAWQNDADLTLYGAD 151
Query: 380 PFVSTSSQLTIPSP--------LFSDLPK---------------------SXXXXXXXXX 472
PF S S+L+I S +FSD K +
Sbjct: 152 PFTSCPSRLSIASSPTSDLNRVIFSDAQKCTNPPLQPQVPSWSPSPSPTPTPPPPPPPPP 211
Query: 473 XXXXXXXXXXXXXXHQKKKEPITVSTQSPPEADSSPSSVLKFLIQCARTADSEPEKAVKS 652
H +K + VS+ SP EA+S+P +LK L+ CAR ADSEP++AVKS
Sbjct: 212 AVVKDTKPANPPPAHLQKNDVAGVSSGSP-EAESAPP-ILKALLDCARLADSEPDRAVKS 269
Query: 653 LNKLRESVSVRGDSVERVAFYFSEALYSRISAKAVKNLPMLFDTNSEELVLSYKALNDAC 832
L +LRESVS GD ERVAFYFSEALYSR+S +A K P LF+T+SEE LSYKALNDAC
Sbjct: 270 LIRLRESVSEHGDPTERVAFYFSEALYSRVSHQAEKR-PTLFETSSEEFTLSYKALNDAC 328
Query: 833 PYSKFAHLTANQAILEATETATHIHIVDFGIVQGLQWAALLQAFATRVSGKPSLVRISGI 1012
PYSKFAHLTANQAILEATE A IHIVDFGIVQG+QWAALLQA ATR +GKP+ +RISGI
Sbjct: 329 PYSKFAHLTANQAILEATERARKIHIVDFGIVQGVQWAALLQALATRSAGKPARIRISGI 388
Query: 1013 PAPALGKSPASSLVATGNRLREFAELLGLNIEFEPILTPIEELNESSFQVKENEVLAVNF 1192
PAPALGKSPASSL ATGNRLR+FA LL LN EFEPILTPI+ELNES+F+V +EVLAVNF
Sbjct: 389 PAPALGKSPASSLFATGNRLRDFARLLDLNFEFEPILTPIQELNESTFRVDPDEVLAVNF 448
Query: 1193 MLQLYNLLGESSVSVERALRLAKSLNPKVLTLGEYEANLNRVDYYNRFKNAIKYYSAVFE 1372
MLQLYNLL E+ VSV ALRLAKSLNPK++TLGEYEA LN VD+ NRFKNA++YY A+F+
Sbjct: 449 MLQLYNLLDETPVSVNAALRLAKSLNPKIMTLGEYEACLNEVDFINRFKNALRYYRAIFD 508
Query: 1373 SLEPSMERDSEDRIRVERLLLGRRIMRMVGPGEGEARTGRLETKENWKCMIEGCGFESIG 1552
SLEP++ RDS DR++VERLLLGRRI ++GP E R R+E KE WK ++E CGFES+
Sbjct: 509 SLEPNLARDSSDRLQVERLLLGRRIAGVIGPEEPGTRRERMEDKEKWKFLVESCGFESVP 568
Query: 1553 VSHYAVSQADILLWNYNYDSKYSVAESPPGFLSIAWNGTPLLTVSSW 1693
+SHYAVSQA ILLWNYNY S Y++ ES PGFLS+AWN PLLTVSSW
Sbjct: 569 LSHYAVSQAKILLWNYNYSSLYAIIESAPGFLSLAWNKVPLLTVSSW 615
>ref|XP_002521601.1| Chitin-inducible gibberellin-responsive protein, putative [Ricinus
communis] gi|223539279|gb|EEF40872.1| Chitin-inducible
gibberellin-responsive protein, putative [Ricinus
communis]
Length = 608
Score = 544 bits (1402), Expect = e-152
Identities = 307/582 (52%), Positives = 384/582 (65%), Gaps = 44/582 (7%)
Frame = +2
Query: 80 NHHQFSLNQWS----GSHTQYPTSXXXXXXXXXXLL-----------PDQYPIVGNVTEI 214
+HH S NQ GS T +P S L PD + + G +
Sbjct: 34 HHHSNSSNQQQQQLLGSLTSFPLSPWPATMSTNPNLGYSGLTSGAAFPDPFQVPGG-GDT 92
Query: 215 GESALPFEQTT--STEFRYGNAEIGGEFDSDEWIMESIMCGAGGSESNS----------- 355
GE F Q S FR+ EFDSDEW M+S+M G ++S++
Sbjct: 93 GEPGFQFPQIDHHSIGFRFS------EFDSDEW-MDSLMGGGDSTDSSNLPSACDAWQNH 145
Query: 356 -EFTLCGTDPFVSTSSQLTIPSPLFSDLPK-----------SXXXXXXXXXXXXXXXXXX 499
+F+L G DPF + ++L++ SDL + +
Sbjct: 146 ADFSLYGPDPFATCPTRLSVGCSSPSDLNRVIYTETQKTLANPLQVSTWSPSPPPPPPPP 205
Query: 500 XXXXXHQKKKEPITVSTQSPPEADSSP----SSVLKFLIQCARTADSEPEKAVKSLNKLR 667
K P+ + T++ + SSP + LK L++CAR A+SEPE+AVKSL KLR
Sbjct: 206 QTVVKDTKPANPLPLKTEAVGVSSSSPDIESAPALKALLECARLAESEPERAVKSLIKLR 265
Query: 668 ESVSVRGDSVERVAFYFSEALYSRISAKAVKNLPMLFDTNSEELVLSYKALNDACPYSKF 847
ESV GD ERVAFYF+EALYSR+ +A K+L M ++ E+ LSYKALNDACPYSKF
Sbjct: 266 ESVCEHGDPTERVAFYFTEALYSRLCLQAEKSLAMFETSSEEDFTLSYKALNDACPYSKF 325
Query: 848 AHLTANQAILEATETATHIHIVDFGIVQGLQWAALLQAFATRVSGKPSLVRISGIPAPAL 1027
AHLTANQAILEATE A+ IHIVDFGIVQG+QWAALLQA ATR +G+P +RISGIPAP L
Sbjct: 326 AHLTANQAILEATEGASKIHIVDFGIVQGVQWAALLQALATRSAGRPLSIRISGIPAPVL 385
Query: 1028 GKSPASSLVATGNRLREFAELLGLNIEFEPILTPIEELNESSFQVKENEVLAVNFMLQLY 1207
GKSPA+SL+ATGNRL +FA+LL LN EF PILTPI+ELNES+F+V +EVLAVNFMLQLY
Sbjct: 386 GKSPAASLLATGNRLGDFAKLLDLNFEFVPILTPIQELNESNFRVDPDEVLAVNFMLQLY 445
Query: 1208 NLLGESSVSVERALRLAKSLNPKVLTLGEYEANLNRVDYYNRFKNAIKYYSAVFESLEPS 1387
NLL E+ +VE AL++AKSLNP+++TLGEYEA+LN++ Y NRFKNA++YYSAVFESLEP+
Sbjct: 446 NLLDETYGAVETALKMAKSLNPEIVTLGEYEASLNQIGYENRFKNALRYYSAVFESLEPN 505
Query: 1388 MERDSEDRIRVERLLLGRRIMRMVGPGEGEARTGRLETKENWKCMIEGCGFESIGVSHYA 1567
+ RDS +R++VERLLLGRRI VGP E R R+E KE W+ ++E CGFES+ +SHYA
Sbjct: 506 LSRDSTERLQVERLLLGRRIAGAVGPEEAGTRRERIEDKEQWRILMESCGFESVALSHYA 565
Query: 1568 VSQADILLWNYNYDSKYSVAESPPGFLSIAWNGTPLLTVSSW 1693
+SQA ILLWNYNY S YS+ ES PGFLS+AWN PLLTVSSW
Sbjct: 566 MSQAKILLWNYNYSSLYSLVESQPGFLSLAWNEVPLLTVSSW 607
>emb|CBI17529.3| unnamed protein product [Vitis vinifera]
Length = 584
Score = 525 bits (1351), Expect = e-146
Identities = 296/516 (57%), Positives = 355/516 (68%), Gaps = 16/516 (3%)
Frame = +2
Query: 68 LGATNHHQFSLNQWSGSHTQYPTSXXXXXXXXXXLLPDQYPIVGNVTEIGESALPFEQTT 247
LG N F LN W+ + T+ D + + G + GE F
Sbjct: 36 LGGVN--SFCLNPWTTTPHTMSTAPALGYGLAGAGFSDPFQVAGTA-DAGEGGFQFAHLE 92
Query: 248 --STEFRYGNAEIGG--EFDSDEWIMESIMCGAGGSESNS------------EFTLCGTD 379
ST FR+ + GG EFDSDEW M+S+M G +ES++ + TL G D
Sbjct: 93 HHSTGFRFSDFSGGGGGEFDSDEW-MDSLMGGGDSTESSNLPSGCDAWQNDADLTLYGAD 151
Query: 380 PFVSTSSQLTIPSPLFSDLPKSXXXXXXXXXXXXXXXXXXXXXXXHQKKKEPITVSTQSP 559
PF S S+L+I S SDL + H +K + VS+ SP
Sbjct: 152 PFTSCPSRLSIASSPTSDLNRVIFSDAQKCTNPPLQPQPANPPPAHLQKNDVAGVSSGSP 211
Query: 560 PEADSSPSSVLKFLIQCARTADSEPEKAVKSLNKLRESVSVRGDSVERVAFYFSEALYSR 739
EA+S+P +LK L+ CAR ADSEP++AVKSL +LRESVS GD ERVAFYFSEALYSR
Sbjct: 212 -EAESAPP-ILKALLDCARLADSEPDRAVKSLIRLRESVSEHGDPTERVAFYFSEALYSR 269
Query: 740 ISAKAVKNLPMLFDTNSEELVLSYKALNDACPYSKFAHLTANQAILEATETATHIHIVDF 919
+S +A K P LF+T+SEE LSYKALNDACPYSKFAHLTANQAILEATE A IHIVDF
Sbjct: 270 VSHQAEKR-PTLFETSSEEFTLSYKALNDACPYSKFAHLTANQAILEATERARKIHIVDF 328
Query: 920 GIVQGLQWAALLQAFATRVSGKPSLVRISGIPAPALGKSPASSLVATGNRLREFAELLGL 1099
GIVQG+QWAALLQA ATR +GKP+ +RISGIPAPALGKSPASSL ATGNRLR+FA LL L
Sbjct: 329 GIVQGVQWAALLQALATRSAGKPARIRISGIPAPALGKSPASSLFATGNRLRDFARLLDL 388
Query: 1100 NIEFEPILTPIEELNESSFQVKENEVLAVNFMLQLYNLLGESSVSVERALRLAKSLNPKV 1279
N EFEPILTPI+ELNES+F+V +EVLAVNFMLQLYNLL E+ VSV ALRLAKSLNPK+
Sbjct: 389 NFEFEPILTPIQELNESTFRVDPDEVLAVNFMLQLYNLLDETPVSVNAALRLAKSLNPKI 448
Query: 1280 LTLGEYEANLNRVDYYNRFKNAIKYYSAVFESLEPSMERDSEDRIRVERLLLGRRIMRMV 1459
+TLGEYEA LN VD+ NRFKNA++YY A+F+SLEP++ RDS DR++VERLLLGRRI ++
Sbjct: 449 MTLGEYEACLNEVDFINRFKNALRYYRAIFDSLEPNLARDSSDRLQVERLLLGRRIAGVI 508
Query: 1460 GPGEGEARTGRLETKENWKCMIEGCGFESIGVSHYA 1567
GP E R R+E KE WK ++E CGFES+ +SHYA
Sbjct: 509 GPEEPGTRRERMEDKEKWKFLVESCGFESVPLSHYA 544
>ref|XP_002327806.1| GRAS family transcription factor [Populus trichocarpa]
gi|222836891|gb|EEE75284.1| GRAS family transcription
factor [Populus trichocarpa]
Length = 589
Score = 511 bits (1316), Expect = e-142
Identities = 279/508 (54%), Positives = 355/508 (69%), Gaps = 15/508 (2%)
Frame = +2
Query: 215 GESALPFEQTTSTEFRYGN-AEIGGEFDSDEWIMESIMCGAGGSES------------NS 355
G S E S+ FR+ + GGEFDSDEW M+S+M G ++S N+
Sbjct: 86 GFSFSNMEHHHSSGFRFPDFTGAGGEFDSDEW-MDSLMNGGDSTDSSNLPSGCDAWQNNA 144
Query: 356 EFTLCGTDPFVSTSSQLTIPSPLFSDLPK--SXXXXXXXXXXXXXXXXXXXXXXXHQKKK 529
+F + +DPF ++ S+LT+ SDL + S K
Sbjct: 145 DFGIYRSDPFNTSPSRLTVGCSPPSDLNRVISNSLWADPSPPQEIKPKTSPPQQPPPTVK 204
Query: 530 EPITVSTQSPPEADSSPSSVLKFLIQCARTADSEPEKAVKSLNKLRESVSVRGDSVERVA 709
+ V ++ E SSP VLK L++CA+ +S+ ++AVKSL + +ESVS GD ERV
Sbjct: 205 NEVVVGSKEIVELSSSP--VLKALVECAQLVESKADQAVKSLIRFKESVSENGDPGERVG 262
Query: 710 FYFSEALYSRISAKAVKNLPMLFDTNSEELVLSYKALNDACPYSKFAHLTANQAILEATE 889
FYF + L R++ + +L T SEE L YKALNDACPYSKFAHLTANQAILEATE
Sbjct: 263 FYFVKGLCRRVAVGELDDLKNFHQTTSEEFTLCYKALNDACPYSKFAHLTANQAILEATE 322
Query: 890 TATHIHIVDFGIVQGLQWAALLQAFATRVSGKPSLVRISGIPAPALGKSPASSLVATGNR 1069
A+ IHIVDFGIVQG+QWAALLQA ATR +GKP +RISGIPAP LGK+PA+SL+ATGNR
Sbjct: 323 KASKIHIVDFGIVQGIQWAALLQALATRSAGKPVRIRISGIPAPVLGKNPAASLLATGNR 382
Query: 1070 LREFAELLGLNIEFEPILTPIEELNESSFQVKENEVLAVNFMLQLYNLLGESSVSVERAL 1249
L +FA+LL LN EFEPILTPI+ELNES F+V+ +EVLAVNFMLQLYNLLGE+ +VE AL
Sbjct: 383 LLDFAKLLDLNFEFEPILTPIQELNESCFRVEPDEVLAVNFMLQLYNLLGETPGAVETAL 442
Query: 1250 RLAKSLNPKVLTLGEYEANLNRVDYYNRFKNAIKYYSAVFESLEPSMERDSEDRIRVERL 1429
++AKSLNP+++TLGEYE +LNRV Y RFKNA++YY+AVFESL+P+M RDS++R++VERL
Sbjct: 443 KMAKSLNPRIVTLGEYEVSLNRVGYLTRFKNALRYYTAVFESLDPNMSRDSQERLQVERL 502
Query: 1430 LLGRRIMRMVGPGEGEARTGRLETKENWKCMIEGCGFESIGVSHYAVSQADILLWNYNYD 1609
LLGRRI +VGP R R+E KE W+ ++E GFES+ +SHYA+SQA ILLWNYN
Sbjct: 503 LLGRRISGVVGP--DGIRRERMEDKEQWRVLMESSGFESVSLSHYAMSQAKILLWNYNSS 560
Query: 1610 SKYSVAESPPGFLSIAWNGTPLLTVSSW 1693
+ YS+ +S PGFL++AWN PLLTVSSW
Sbjct: 561 TMYSLDDSQPGFLTLAWNEVPLLTVSSW 588
>emb|CAN74537.1| hypothetical protein VITISV_023717 [Vitis vinifera]
Length = 893
Score = 510 bits (1313), Expect = e-142
Identities = 296/545 (54%), Positives = 356/545 (65%), Gaps = 45/545 (8%)
Frame = +2
Query: 68 LGATNHHQFSLNQWSGSHTQYPTSXXXXXXXXXXLLPDQYPIVGNVTEIGESALPFEQTT 247
LG N F LN W+ + T+ D + + G + GE F
Sbjct: 69 LGGVN--SFCLNPWTTTPHTMSTAPALGYGLAGAGFSDPFQVAGTA-DAGEGGFQFAHLE 125
Query: 248 --STEFRYGNAEIGG--EFDSDEWIMESIMCGAGGSES------------NSEFTLCGTD 379
ST FR+ + GG EFDSDEW M+S+M G +ES +++ TL G D
Sbjct: 126 HHSTGFRFSDFSGGGGGEFDSDEW-MDSLMGGGDSTESSNLPSGCDAWQNBADLTLYGAD 184
Query: 380 PFVSTSSQLTIPSP--------LFSDLPK---------------------SXXXXXXXXX 472
PF S S+L+I S +FSD K +
Sbjct: 185 PFTSCPSRLSIASSPTSDLNRVIFSDAQKCTNPPLQPQVPSWSPSPSPTPTPPPPPPPPP 244
Query: 473 XXXXXXXXXXXXXXHQKKKEPITVSTQSPPEADSSPSSVLKFLIQCARTADSEPEKAVKS 652
H +K + VS+ SP E +S+P +LK L+ CAR ADSEP++AVKS
Sbjct: 245 AVVKDTKPANPPPAHLQKNDVAGVSSGSP-EXESAPP-ILKALLDCARLADSEPDRAVKS 302
Query: 653 LNKLRESVSVRGDSVERVAFYFSEALYSRISAKAVKNLPMLFDTNSEELVLSYKALNDAC 832
L +LRESVS GD ERVAFYFSEALYSR+S +A K P LF+T+SEE LSYKALNDAC
Sbjct: 303 LIRLRESVSEHGDPTERVAFYFSEALYSRVSHQAEKR-PTLFETSSEEFTLSYKALNDAC 361
Query: 833 PYSKFAHLTANQAILEATETATHIHIVDFGIVQGLQWAALLQAFATRVSGKPSLVRISGI 1012
PYSKFAHLTANQAILEATE A IHIVDFGIVQG+QWAALLQA ATR +GKP+ +RISGI
Sbjct: 362 PYSKFAHLTANQAILEATERARKIHIVDFGIVQGVQWAALLQALATRSAGKPARIRISGI 421
Query: 1013 PAPALGKSPASSLVATGNRLREFAELLGLNIEFEPILTPIEELNESSFQVKENEVLAVNF 1192
PAPALGKSPASSL ATGNRLR+FA LL LN EFEPILTPI+ELNES+F+V +EVLAVNF
Sbjct: 422 PAPALGKSPASSLFATGNRLRDFARLLDLNFEFEPILTPIQELNESTFRVDPDEVLAVNF 481
Query: 1193 MLQLYNLLGESSVSVERALRLAKSLNPKVLTLGEYEANLNRVDYYNRFKNAIKYYSAVFE 1372
MLQLYNLL E+ VSV ALRLAKSLNPK++TLGEYEA LN VD+ NRFKNA++YY A+F+
Sbjct: 482 MLQLYNLLDETPVSVNAALRLAKSLNPKIMTLGEYEACLNEVDFINRFKNALRYYRAIFD 541
Query: 1373 SLEPSMERDSEDRIRVERLLLGRRIMRMVGPGEGEARTGRLETKENWKCMIEGCGFESIG 1552
SLEP++ RDS DR++VERLLLGRRI ++GP E R R+E KE WK ++E CGFES+
Sbjct: 542 SLEPNLARDSSDRLQVERLLLGRRIAGVIGPEEPGTRRERMEDKEKWKFLVESCGFESVP 601
Query: 1553 VSHYA 1567
+SHYA
Sbjct: 602 LSHYA 606