BLASTX nr result

ID: Coptis21_contig00011538 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011538
         (1817 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283177.1| PREDICTED: translation initiation factor eIF...   714   0.0  
emb|CBI16861.3| unnamed protein product [Vitis vinifera]              668   0.0  
ref|XP_002329318.1| predicted protein [Populus trichocarpa] gi|2...   658   0.0  
ref|XP_003543906.1| PREDICTED: translation initiation factor eIF...   657   0.0  
ref|XP_003554977.1| PREDICTED: translation initiation factor eIF...   655   0.0  

>ref|XP_002283177.1| PREDICTED: translation initiation factor eIF-2B subunit delta-like
            [Vitis vinifera]
          Length = 650

 Score =  714 bits (1844), Expect = 0.0
 Identities = 369/546 (67%), Positives = 424/546 (77%), Gaps = 11/546 (2%)
 Frame = +1

Query: 1    VGDGDFLE----------GRKGKVASSLPSGGFEMGAVKSSNLTTVSVMKMPPGVSEKAG 150
            VGDG+F E          G  GKVASS P GGF++ AVK SNLTTVSV+ MPPG+S K+G
Sbjct: 109  VGDGEFSEDASGAGWTHRGNSGKVASSFPGGGFDLTAVKPSNLTTVSVVNMPPGISVKSG 168

Query: 151  GGLIEVRNEHTQSSKPLKEKSSXXXXXXXXXXXXXXXXXXXXEGSKTGVVSGG-ATLGNP 327
            G  IEV+NE   SS+ LKEK+S                    E SK  + + G AT  N 
Sbjct: 169  GASIEVQNEQPASSRSLKEKTSKAERRALQEAQRAAKAAAKAEVSKAPIAASGVATSVNA 228

Query: 328  KPAKSVKLPLPKKDGSQVAASVAASEKKGSDRPAEKDRKKDVPHPRLQFDDXXXXXXXXX 507
            KPAK  KL   KKD    +ASV ASEKKG DRP EKDRKKDVPHPR+QFDD         
Sbjct: 229  KPAKVSKLSSQKKD----SASVTASEKKGVDRPPEKDRKKDVPHPRMQFDDKSRVEKAKR 284

Query: 508  XXXXXQTEARNRVELFRHLPQYEQGTQLPDLEAKYFQLDPVHPSVYKVGIRYLVGDISGG 687
                   E RNRVELFRHLPQYE+GT LPDLE+K+F LDP+HP+VYKVG++YL GD+SGG
Sbjct: 285  RAVVRPIEVRNRVELFRHLPQYERGTLLPDLESKFFLLDPMHPAVYKVGLQYLAGDVSGG 344

Query: 688  NARCIAMLHAFKDAIRDYSTPLEKVLTRDLTAKISSYISFLNECRPLAISMGNTIKFLKS 867
            NARCIAML AF++AI+DYSTP EK L RDLTA++SSY+SFL ECRPL+ISMGN I+FLKS
Sbjct: 345  NARCIAMLQAFQEAIKDYSTPPEKTLVRDLTARLSSYVSFLIECRPLSISMGNAIRFLKS 404

Query: 868  RIGRLPLTMSESEAKATLYSDIDCFINEKIITADKVIVEHAVTKISDGDVLLTYGSSAVV 1047
            RI +LPL++SESEAKA+L SDI+ FINEKI+ ADKVIV HAVTKI DGDVLLTYGSS+ V
Sbjct: 405  RIAKLPLSLSESEAKASLQSDINRFINEKIVLADKVIVRHAVTKIRDGDVLLTYGSSSAV 464

Query: 1048 KMLLLYAHKLGKQFRVVVVDSRPKLEXXXXXXXXXXXXXXCTYTHINAISYIMHEVTRVF 1227
            +M+LLYAH+LGKQFRVVVVDSRPKLE              CTYTHINA+SYIMHEVTRVF
Sbjct: 465  EMILLYAHELGKQFRVVVVDSRPKLEGQLLLRRLVGKGLSCTYTHINAVSYIMHEVTRVF 524

Query: 1228 LGASSVLSNGTVYSRVGTASVAMVANAFSVPVLICCETYKFHERVQLDSICCNELGDPDA 1407
            LGASSVLSNGTVYSRVGTA V+MVA+AF VPVL+CCE YKF+ERVQLDSIC NELGDPDA
Sbjct: 525  LGASSVLSNGTVYSRVGTACVSMVAHAFRVPVLVCCEAYKFYERVQLDSICSNELGDPDA 584

Query: 1408 ISNVPGREDIKHLNNWTSNENLQILNLLYDATPSDYVSMIISDHGMLPPTSVPVIVREYR 1587
            IS VPGRE+I +L++W  +ENLQ+LNL+YDATPSDYVSMII+D+GM+PPTSVPVIVREYR
Sbjct: 585  ISKVPGREEINYLDDWAKSENLQLLNLIYDATPSDYVSMIITDYGMVPPTSVPVIVREYR 644

Query: 1588 REQLWL 1605
            RE LW+
Sbjct: 645  REHLWI 650


>emb|CBI16861.3| unnamed protein product [Vitis vinifera]
          Length = 492

 Score =  668 bits (1723), Expect = 0.0
 Identities = 341/496 (68%), Positives = 392/496 (79%), Gaps = 1/496 (0%)
 Frame = +1

Query: 121  MPPGVSEKAGGGLIEVRNEHTQSSKPLKEKSSXXXXXXXXXXXXXXXXXXXXEGSKTGVV 300
            MPPG+S K+GG  IEV+NE   SS+ LKEK+S                    E SK  + 
Sbjct: 1    MPPGISVKSGGASIEVQNEQPASSRSLKEKTSKAERRALQEAQRAAKAAAKAEVSKAPIA 60

Query: 301  SGG-ATLGNPKPAKSVKLPLPKKDGSQVAASVAASEKKGSDRPAEKDRKKDVPHPRLQFD 477
            + G AT  N KPAK  KL   KKD    +ASV ASEKKG DRP EKDRKKDVPHPR+QFD
Sbjct: 61   ASGVATSVNAKPAKVSKLSSQKKD----SASVTASEKKGVDRPPEKDRKKDVPHPRMQFD 116

Query: 478  DXXXXXXXXXXXXXXQTEARNRVELFRHLPQYEQGTQLPDLEAKYFQLDPVHPSVYKVGI 657
            D                E RNRVELFRHLPQYE+GT LPDLE+K+F LDP+HP+VYKVG+
Sbjct: 117  DKSRVEKAKRRAVVRPIEVRNRVELFRHLPQYERGTLLPDLESKFFLLDPMHPAVYKVGL 176

Query: 658  RYLVGDISGGNARCIAMLHAFKDAIRDYSTPLEKVLTRDLTAKISSYISFLNECRPLAIS 837
            +YL GD+SGGNARCIAML AF++AI+DYSTP EK L RDLTA++SSY+SFL ECRPL+IS
Sbjct: 177  QYLAGDVSGGNARCIAMLQAFQEAIKDYSTPPEKTLVRDLTARLSSYVSFLIECRPLSIS 236

Query: 838  MGNTIKFLKSRIGRLPLTMSESEAKATLYSDIDCFINEKIITADKVIVEHAVTKISDGDV 1017
            MGN I+FLKSRI +LPL++SESEAKA+L SDI+ FINEKI+ ADKVIV HAVTKI DGDV
Sbjct: 237  MGNAIRFLKSRIAKLPLSLSESEAKASLQSDINRFINEKIVLADKVIVRHAVTKIRDGDV 296

Query: 1018 LLTYGSSAVVKMLLLYAHKLGKQFRVVVVDSRPKLEXXXXXXXXXXXXXXCTYTHINAIS 1197
            LLTYGSS+ V+M+LLYAH+LGKQFRVVVVDSRPKLE              CTYTHINA+S
Sbjct: 297  LLTYGSSSAVEMILLYAHELGKQFRVVVVDSRPKLEGQLLLRRLVGKGLSCTYTHINAVS 356

Query: 1198 YIMHEVTRVFLGASSVLSNGTVYSRVGTASVAMVANAFSVPVLICCETYKFHERVQLDSI 1377
            YIMHEVTRVFLGASSVLSNGTVYSRVGTA V+MVA+AF VPVL+CCE YKF+ERVQLDSI
Sbjct: 357  YIMHEVTRVFLGASSVLSNGTVYSRVGTACVSMVAHAFRVPVLVCCEAYKFYERVQLDSI 416

Query: 1378 CCNELGDPDAISNVPGREDIKHLNNWTSNENLQILNLLYDATPSDYVSMIISDHGMLPPT 1557
            C NELGDPDAIS VPGRE+I +L++W  +ENLQ+LNL+YDATPSDYVSMII+D+GM+PPT
Sbjct: 417  CSNELGDPDAISKVPGREEINYLDDWAKSENLQLLNLIYDATPSDYVSMIITDYGMVPPT 476

Query: 1558 SVPVIVREYRREQLWL 1605
            SVPVIVREYRRE LW+
Sbjct: 477  SVPVIVREYRREHLWI 492


>ref|XP_002329318.1| predicted protein [Populus trichocarpa] gi|222870772|gb|EEF07903.1|
            predicted protein [Populus trichocarpa]
          Length = 634

 Score =  658 bits (1697), Expect = 0.0
 Identities = 348/536 (64%), Positives = 408/536 (76%), Gaps = 10/536 (1%)
 Frame = +1

Query: 28   RKGKVA--SSLPSG-GFEMGAVKS-------SNLTTVSVMKMPPGVSEKAGGGLIEVRNE 177
            R+G  A  SSLP G GF++ AVKS       S LTTVSV+   P   EK GG  +E++N+
Sbjct: 106  RRGVAAASSSLPGGLGFDIAAVKSAASSVPASGLTTVSVVNNLP--IEKGGGVAVEMQND 163

Query: 178  HTQSSKPLKEKSSXXXXXXXXXXXXXXXXXXXXEGSKTGVVSGGATLGNPKPAKSVKLPL 357
             +  SK LKEK++                    EG KT   + GA   + K AKSVK P 
Sbjct: 164  QSSRSKSLKEKTTKAERRALQEAQRAAKAAAKAEGGKTPAAASGAA-ASAKSAKSVKPPS 222

Query: 358  PKKDGSQVAASVAASEKKGSDRPAEKDRKKDVPHPRLQFDDXXXXXXXXXXXXXXQTEAR 537
             K D    +A+VA SEKKG DRP EKDRKK+VP PR+Q+DD              QTEAR
Sbjct: 223  QKND----SATVAVSEKKGGDRPPEKDRKKEVPQPRMQYDDKSRVEKAKRRAVVKQTEAR 278

Query: 538  NRVELFRHLPQYEQGTQLPDLEAKYFQLDPVHPSVYKVGIRYLVGDISGGNARCIAMLHA 717
            NRVELFRHLPQYE+ TQL +LE+K+F+LDP+HP+VYKVG++YL GD+ GGNARCIAML A
Sbjct: 279  NRVELFRHLPQYERRTQLTELESKFFELDPMHPAVYKVGLQYLSGDVCGGNARCIAMLQA 338

Query: 718  FKDAIRDYSTPLEKVLTRDLTAKISSYISFLNECRPLAISMGNTIKFLKSRIGRLPLTMS 897
            F++AI+DYSTP EK L RDLTAKI SY+SFL ECRPL+ISMGN I+FLK+RI +LPLT+S
Sbjct: 339  FQEAIKDYSTPSEKTLARDLTAKIGSYLSFLIECRPLSISMGNAIRFLKNRIAKLPLTLS 398

Query: 898  ESEAKATLYSDIDCFINEKIITADKVIVEHAVTKISDGDVLLTYGSSAVVKMLLLYAHKL 1077
            E+E KATL+SDID FINEKII ADKVIV+HAVTKISDGDVLLTYGS + V+M+LL+AH+L
Sbjct: 399  EAEVKATLHSDIDRFINEKIILADKVIVKHAVTKISDGDVLLTYGSPSAVEMVLLHAHEL 458

Query: 1078 GKQFRVVVVDSRPKLEXXXXXXXXXXXXXXCTYTHINAISYIMHEVTRVFLGASSVLSNG 1257
            GKQFRVVVVDSRPKLE              CTYTH+NAISYIMHEVTRVFLGASSVLSNG
Sbjct: 459  GKQFRVVVVDSRPKLEGQLLLHRLVGKGIDCTYTHVNAISYIMHEVTRVFLGASSVLSNG 518

Query: 1258 TVYSRVGTASVAMVANAFSVPVLICCETYKFHERVQLDSICCNELGDPDAISNVPGREDI 1437
            TVYSRVGTA VAMVA+AF VPVL+CCE YKFHERVQLDS+C NELGDPD IS V GREDI
Sbjct: 519  TVYSRVGTACVAMVAHAFRVPVLVCCEAYKFHERVQLDSLCSNELGDPDVISKVRGREDI 578

Query: 1438 KHLNNWTSNENLQILNLLYDATPSDYVSMIISDHGMLPPTSVPVIVREYRREQLWL 1605
              L+  T +ENLQ+LNL+YDATPSDY+SMII+D+GM+PPTSVPVIVR+Y+RE LW+
Sbjct: 579  NLLDGSTDSENLQLLNLIYDATPSDYISMIITDYGMVPPTSVPVIVRDYQREHLWI 634


>ref|XP_003543906.1| PREDICTED: translation initiation factor eIF-2B subunit delta-like
            [Glycine max]
          Length = 659

 Score =  657 bits (1694), Expect = 0.0
 Identities = 351/549 (63%), Positives = 412/549 (75%), Gaps = 16/549 (2%)
 Frame = +1

Query: 7    DGDFLEGRK--GKVA-SSLPSGGFEMGAVKS------SNLTTVSVMKMPPGVSEK----- 144
            DG + +G    GK+A SS P GGF++ A+K+      S LTTVSV+    G+ EK     
Sbjct: 120  DGGYFKGNGAGGKLAASSFPRGGFDLTAMKAASLVPASELTTVSVVNDSLGIPEKEKGNK 179

Query: 145  AGGGLIEVRNEHTQSS--KPLKEKSSXXXXXXXXXXXXXXXXXXXXEGSKTGVVSGGATL 318
             GG  +EV+++   S   KP K K+S                    EGSK    SG A  
Sbjct: 180  TGGSAVEVKDQPNSSKQQKP-KPKTSKAERRALQEAQRAAKAAEKGEGSKA---SGTAAS 235

Query: 319  GNPKPAKSVKLPLPKKDGSQVAASVAASEKKGSDRPAEKDRKKDVPHPRLQFDDXXXXXX 498
             NPKPAK+VK P  K D     A++AASEKKG + P EKDRKKD P PRLQ+DD      
Sbjct: 236  TNPKPAKAVK-PAQKVDN----AAIAASEKKGGEIPPEKDRKKDAPQPRLQYDDKSRVEK 290

Query: 499  XXXXXXXXQTEARNRVELFRHLPQYEQGTQLPDLEAKYFQLDPVHPSVYKVGIRYLVGDI 678
                    QTEARNRVELFRHLPQYE+G+QLPDLEAK+F L PVHP VYKVG++YL GDI
Sbjct: 291  AKRRAVVKQTEARNRVELFRHLPQYERGSQLPDLEAKFFHLSPVHPLVYKVGLQYLTGDI 350

Query: 679  SGGNARCIAMLHAFKDAIRDYSTPLEKVLTRDLTAKISSYISFLNECRPLAISMGNTIKF 858
            SGGNARCIAML AF++AI+DY  P EK L RDLTAKI SY+SFL ECRPL+ISMGN I+F
Sbjct: 351  SGGNARCIAMLQAFQEAIKDYKVPPEKTLVRDLTAKIGSYVSFLIECRPLSISMGNAIRF 410

Query: 859  LKSRIGRLPLTMSESEAKATLYSDIDCFINEKIITADKVIVEHAVTKISDGDVLLTYGSS 1038
            LKSRI +LPLT+SESEAKA+L SDI+CFI+EKII A+KVIV+HAVTKI DGDVLLT+GSS
Sbjct: 411  LKSRIAKLPLTLSESEAKASLESDIECFISEKIILANKVIVKHAVTKIRDGDVLLTFGSS 470

Query: 1039 AVVKMLLLYAHKLGKQFRVVVVDSRPKLEXXXXXXXXXXXXXXCTYTHINAISYIMHEVT 1218
            + V+M+LL+AH+LG+QFRVVVVDSRPKL               CTYTHINA+SYIMHEVT
Sbjct: 471  SAVEMILLHAHELGRQFRVVVVDSRPKLRGQLLLRRLVENGLSCTYTHINAVSYIMHEVT 530

Query: 1219 RVFLGASSVLSNGTVYSRVGTASVAMVANAFSVPVLICCETYKFHERVQLDSICCNELGD 1398
            RVFLGAS+VLSNGTVYSRVGTA VAMVA+AF VPV++CCE YKFHERVQLDSIC NELG+
Sbjct: 531  RVFLGASAVLSNGTVYSRVGTACVAMVAHAFRVPVIVCCEAYKFHERVQLDSICSNELGN 590

Query: 1399 PDAISNVPGREDIKHLNNWTSNENLQILNLLYDATPSDYVSMIISDHGMLPPTSVPVIVR 1578
            PD ISNV GRED+KHL+ W + ENLQ+LNL+YDATPSDYVSMI++D+GM+PPTSVPVIVR
Sbjct: 591  PDVISNVLGREDVKHLDGWANIENLQLLNLVYDATPSDYVSMIVTDYGMVPPTSVPVIVR 650

Query: 1579 EYRREQLWL 1605
            EY REQ+W+
Sbjct: 651  EYGREQVWI 659


>ref|XP_003554977.1| PREDICTED: translation initiation factor eIF-2B subunit delta-like
            [Glycine max]
          Length = 660

 Score =  655 bits (1690), Expect = 0.0
 Identities = 353/553 (63%), Positives = 410/553 (74%), Gaps = 19/553 (3%)
 Frame = +1

Query: 4    GDGDFLEGRK---GKVA-SSLPSGGFEMGAVK----------SSNLTTVSVMKMPPGVSE 141
            G+G F +G     GKVA SS P GGF++ A+K          +S LTTVSV+    G+ E
Sbjct: 117  GEGGFFKGNGAGGGKVAASSFPRGGFDLTAMKKAAAASVVVPASELTTVSVVNDSLGIPE 176

Query: 142  K-----AGGGLIEVRNEHTQSSKPLKEKSSXXXXXXXXXXXXXXXXXXXXEGSKTGVVSG 306
            K     AGG  +EV+++   SSK  K K S                    EGSK    SG
Sbjct: 177  KEKGNKAGGSAVEVKDQ-PNSSKQQKPKLSKAERRALQESQRAAKAAAKGEGSKA---SG 232

Query: 307  GATLGNPKPAKSVKLPLPKKDGSQVAASVAASEKKGSDRPAEKDRKKDVPHPRLQFDDXX 486
                 N KPAK+VK P  K D     A+VAASEKKG + P EKDRKKD P PR+Q+DD  
Sbjct: 233  TVATMNAKPAKAVK-PAQKVDN----AAVAASEKKGGEIPPEKDRKKDAPQPRMQYDDKS 287

Query: 487  XXXXXXXXXXXXQTEARNRVELFRHLPQYEQGTQLPDLEAKYFQLDPVHPSVYKVGIRYL 666
                        QTEARNRVELFRHLPQYE G+QLPDLEAK+F L PVHPSVYKVG++YL
Sbjct: 288  RVEKAKRRAVVKQTEARNRVELFRHLPQYEHGSQLPDLEAKFFHLSPVHPSVYKVGLQYL 347

Query: 667  VGDISGGNARCIAMLHAFKDAIRDYSTPLEKVLTRDLTAKISSYISFLNECRPLAISMGN 846
             GDI+GGNARCIAML AF++AI+DY  P EK L RDLTAKISSY+SFL ECRPL+ISMGN
Sbjct: 348  TGDIAGGNARCIAMLQAFQEAIKDYKVPHEKTLVRDLTAKISSYVSFLIECRPLSISMGN 407

Query: 847  TIKFLKSRIGRLPLTMSESEAKATLYSDIDCFINEKIITADKVIVEHAVTKISDGDVLLT 1026
             I+FLKS I +LPLT+SESEAKA+L SDI+ FI+EKII A+KVIV+HAVTKI DGDVLLT
Sbjct: 408  AIRFLKSHIAKLPLTLSESEAKASLQSDIERFISEKIILANKVIVKHAVTKIRDGDVLLT 467

Query: 1027 YGSSAVVKMLLLYAHKLGKQFRVVVVDSRPKLEXXXXXXXXXXXXXXCTYTHINAISYIM 1206
            YGSS+ V+M+LL+AH+LGKQFRVVVVDSRPKL               CTYTHINA+SYIM
Sbjct: 468  YGSSSAVEMILLHAHELGKQFRVVVVDSRPKLRGQLLLRRLVEKGLSCTYTHINAVSYIM 527

Query: 1207 HEVTRVFLGASSVLSNGTVYSRVGTASVAMVANAFSVPVLICCETYKFHERVQLDSICCN 1386
            HEVTRVFLGAS+VLSNGTVYSRVGTA VAMVA+AF VPV++CCE YKFHERVQLDSIC N
Sbjct: 528  HEVTRVFLGASAVLSNGTVYSRVGTACVAMVAHAFRVPVIVCCEAYKFHERVQLDSICSN 587

Query: 1387 ELGDPDAISNVPGREDIKHLNNWTSNENLQILNLLYDATPSDYVSMIISDHGMLPPTSVP 1566
            ELG+PD ISNV GRED+KHL+ W + ENLQ+LNL+YDATPSDYVSMI++D+GM+PPTSVP
Sbjct: 588  ELGNPDVISNVLGREDVKHLDGWANIENLQLLNLVYDATPSDYVSMIVTDYGMVPPTSVP 647

Query: 1567 VIVREYRREQLWL 1605
            VIVREY REQ+W+
Sbjct: 648  VIVREYGREQVWI 660