BLASTX nr result

ID: Coptis21_contig00011534 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011534
         (1059 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314544.1| predicted protein [Populus trichocarpa] gi|2...   492   e-137
gb|ACD56609.1| putative integral membrane protein [Gossypioides ...   486   e-135
ref|XP_002514953.1| GDP-mannose transporter, putative [Ricinus c...   484   e-134
gb|ABO41833.1| putative integral membrane protein [Gossypium rai...   479   e-133
ref|XP_002311722.1| predicted protein [Populus trichocarpa] gi|2...   478   e-132

>ref|XP_002314544.1| predicted protein [Populus trichocarpa] gi|222863584|gb|EEF00715.1|
            predicted protein [Populus trichocarpa]
          Length = 371

 Score =  492 bits (1267), Expect = e-137
 Identities = 247/347 (71%), Positives = 273/347 (78%)
 Frame = +3

Query: 18   MVNDVENHKNGQVKEIPISTLPPGEVQSTWYDSLLRHVSVYGIAAGYCISASLLSIINKW 197
            M  D+EN K  + ++   S  P  E  +TWY  LL+  S+YGIAAGYCISASLLSIINKW
Sbjct: 1    MSADMENPKAEEEQKGTGSASPANETPATWYSGLLKQTSIYGIAAGYCISASLLSIINKW 60

Query: 198  AVMKFPYPGALTALQYFTSAAGVLLFGKLRILEHDSLEFLTMWRFLPAAMIFYLSLFTNS 377
            A+MKFPYPGALTALQYFTSAAGVL+ G  ++LEHDSL+ LTMWRFLPAA++FYLSLFTNS
Sbjct: 61   AIMKFPYPGALTALQYFTSAAGVLVCGWCKVLEHDSLDLLTMWRFLPAAIMFYLSLFTNS 120

Query: 378  ELLLHANVDTFIVFRSAVPIFVAIGEALYLHQPWPSIRTWLSLSTIFAGSVLYVLTDYQF 557
            ELLLHANVDTFIVFRS VPIFVAIGE L+LHQPWPS++TWLSLSTIF GSVLYVLTDYQF
Sbjct: 121  ELLLHANVDTFIVFRSLVPIFVAIGETLFLHQPWPSLKTWLSLSTIFGGSVLYVLTDYQF 180

Query: 558  TLTAYSWALAYLISMTVDFVYIKHVVMTVGLNTWGXXXXXXXXXXXXXXXXXXXXXXXKK 737
            T+ AYSWALAYL+SMT+DFVYIKHVVMT+GLNTWG                       KK
Sbjct: 181  TVMAYSWALAYLVSMTIDFVYIKHVVMTIGLNTWGLVVYNNLEALLLFPLELLIMGELKK 240

Query: 738  IKHEITDESDWHSFAVVLPVGLSCLFGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVI 917
            IKHEI+DESDWHSFAVVLPVGLSCLFGLAISFFGFSCRRAISATG+TVLG+VNKLLTVVI
Sbjct: 241  IKHEISDESDWHSFAVVLPVGLSCLFGLAISFFGFSCRRAISATGYTVLGVVNKLLTVVI 300

Query: 918  NLIIWDKHSTVVXXXXXXXXXXXXXXYQQSTSNKPKVIEAAAKAGDE 1058
            NL+IWDKHST V              YQQSTS    V E  A+  DE
Sbjct: 301  NLVIWDKHSTFVGTVGLLICMLGGIMYQQSTSKPKAVPEVKAEQTDE 347


>gb|ACD56609.1| putative integral membrane protein [Gossypioides kirkii]
          Length = 371

 Score =  486 bits (1251), Expect = e-135
 Identities = 239/325 (73%), Positives = 263/325 (80%)
 Frame = +3

Query: 66   PISTLPPGEVQSTWYDSLLRHVSVYGIAAGYCISASLLSIINKWAVMKFPYPGALTALQY 245
            P   +P G+ Q TWY  +L+ VSVYG+AAGYCISASLLSIINKWAVMKFPYPGALTALQY
Sbjct: 13   PEVLVPSGDAQETWYSFVLKQVSVYGVAAGYCISASLLSIINKWAVMKFPYPGALTALQY 72

Query: 246  FTSAAGVLLFGKLRILEHDSLEFLTMWRFLPAAMIFYLSLFTNSELLLHANVDTFIVFRS 425
             TSAAGV+L G  ++LEHD L+ LTMWRFLPAA+IFYLSLFTNSELLLHANVDTFIVFRS
Sbjct: 73   LTSAAGVVLCGWFKVLEHDRLDLLTMWRFLPAAIIFYLSLFTNSELLLHANVDTFIVFRS 132

Query: 426  AVPIFVAIGEALYLHQPWPSIRTWLSLSTIFAGSVLYVLTDYQFTLTAYSWALAYLISMT 605
            AVPIFVAIGE L+L QPWPS++TW+SL TIF GSVLYVLTDYQFTLTAY+WA AYL+SM+
Sbjct: 133  AVPIFVAIGETLFLSQPWPSLKTWISLGTIFGGSVLYVLTDYQFTLTAYTWAAAYLVSMS 192

Query: 606  VDFVYIKHVVMTVGLNTWGXXXXXXXXXXXXXXXXXXXXXXXKKIKHEITDESDWHSFAV 785
            +DFVYIKHVVMT+GLNTWG                       KKIKHEI+DESDWHSF V
Sbjct: 193  IDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGELKKIKHEISDESDWHSFQV 252

Query: 786  VLPVGLSCLFGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVINLIIWDKHSTVVXXXX 965
            +LPVGLSCLFGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVINL+IWDKHST V    
Sbjct: 253  ILPVGLSCLFGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTFVGTVG 312

Query: 966  XXXXXXXXXXYQQSTSNKPKVIEAA 1040
                      YQQSTS+KPK +  A
Sbjct: 313  LLICMLGGVMYQQSTSSKPKTVSEA 337


>ref|XP_002514953.1| GDP-mannose transporter, putative [Ricinus communis]
            gi|223546004|gb|EEF47507.1| GDP-mannose transporter,
            putative [Ricinus communis]
          Length = 392

 Score =  484 bits (1245), Expect = e-134
 Identities = 240/336 (71%), Positives = 271/336 (80%)
 Frame = +3

Query: 18   MVNDVENHKNGQVKEIPISTLPPGEVQSTWYDSLLRHVSVYGIAAGYCISASLLSIINKW 197
            M  DVEN K G+ ++ P ++    ++Q+TWY  LLR  S+YGIAAGYC+SASLLSIINKW
Sbjct: 19   MSGDVENPKVGENQKGPGASSLANDIQATWYSGLLRQTSIYGIAAGYCLSASLLSIINKW 78

Query: 198  AVMKFPYPGALTALQYFTSAAGVLLFGKLRILEHDSLEFLTMWRFLPAAMIFYLSLFTNS 377
            AVMKFPYPGALTALQYFTSAAGVL  G  +++EHD L+ LTMWRFLPAA++FYLSLFTNS
Sbjct: 79   AVMKFPYPGALTALQYFTSAAGVLACGWFKLVEHDRLDLLTMWRFLPAAIMFYLSLFTNS 138

Query: 378  ELLLHANVDTFIVFRSAVPIFVAIGEALYLHQPWPSIRTWLSLSTIFAGSVLYVLTDYQF 557
            ELLLHANVDTFIVFRS VPIFVAIGE L+LHQPWP+++TWLSL+TIF GSVLYVLTDYQF
Sbjct: 139  ELLLHANVDTFIVFRSVVPIFVAIGETLFLHQPWPALKTWLSLTTIFGGSVLYVLTDYQF 198

Query: 558  TLTAYSWALAYLISMTVDFVYIKHVVMTVGLNTWGXXXXXXXXXXXXXXXXXXXXXXXKK 737
            T+TAYSWALAYL+SMTVDFVYIKHVVMT+GLNTWG                       KK
Sbjct: 199  TVTAYSWALAYLVSMTVDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGELKK 258

Query: 738  IKHEITDESDWHSFAVVLPVGLSCLFGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVI 917
            IKHE TDESDW++F VVLPVGLSCLFGLAISFFGFSCRRAISATG+TVLG+VNKLLTVVI
Sbjct: 259  IKHEFTDESDWYTFEVVLPVGLSCLFGLAISFFGFSCRRAISATGYTVLGVVNKLLTVVI 318

Query: 918  NLIIWDKHSTVVXXXXXXXXXXXXXXYQQSTSNKPK 1025
            NL+IWDKHS+ +              YQQSTS KPK
Sbjct: 319  NLVIWDKHSSFIGTVGLLICMLGGIMYQQSTS-KPK 353


>gb|ABO41833.1| putative integral membrane protein [Gossypium raimondii]
          Length = 369

 Score =  479 bits (1233), Expect = e-133
 Identities = 237/325 (72%), Positives = 261/325 (80%)
 Frame = +3

Query: 66   PISTLPPGEVQSTWYDSLLRHVSVYGIAAGYCISASLLSIINKWAVMKFPYPGALTALQY 245
            P   +P G+ Q TWY  +L+ VSVYG+AAGYCISASLLSIINKWAVMKFPYPGALTALQY
Sbjct: 13   PEVLVPSGDAQETWYSCVLKQVSVYGVAAGYCISASLLSIINKWAVMKFPYPGALTALQY 72

Query: 246  FTSAAGVLLFGKLRILEHDSLEFLTMWRFLPAAMIFYLSLFTNSELLLHANVDTFIVFRS 425
             TSAAGV+L G  ++LEHD L+  TM +FLPAA+IFYLSLFTNSELLLHANVDTFIVFRS
Sbjct: 73   LTSAAGVVLCGWFKVLEHDPLDLRTMGQFLPAAIIFYLSLFTNSELLLHANVDTFIVFRS 132

Query: 426  AVPIFVAIGEALYLHQPWPSIRTWLSLSTIFAGSVLYVLTDYQFTLTAYSWALAYLISMT 605
            AVPIFVAIGE LYL QPWPS++TW+SL TIF GSVLYVLTDYQFTLTAY+WA AYL+SM+
Sbjct: 133  AVPIFVAIGETLYLSQPWPSLKTWISLGTIFGGSVLYVLTDYQFTLTAYTWAAAYLVSMS 192

Query: 606  VDFVYIKHVVMTVGLNTWGXXXXXXXXXXXXXXXXXXXXXXXKKIKHEITDESDWHSFAV 785
            +DFVYIKHVVMT+GLNTWG                       KKIKHEI+DESDWHSF V
Sbjct: 193  IDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGELKKIKHEISDESDWHSFQV 252

Query: 786  VLPVGLSCLFGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVINLIIWDKHSTVVXXXX 965
            +LPVGLSCLFGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVINL+IWDKHST V    
Sbjct: 253  ILPVGLSCLFGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTFVGTVG 312

Query: 966  XXXXXXXXXXYQQSTSNKPKVIEAA 1040
                      YQQSTS+KPK +  A
Sbjct: 313  LLICMLGGVMYQQSTSSKPKAVSEA 337


>ref|XP_002311722.1| predicted protein [Populus trichocarpa] gi|222851542|gb|EEE89089.1|
            predicted protein [Populus trichocarpa]
          Length = 337

 Score =  478 bits (1229), Expect = e-132
 Identities = 234/319 (73%), Positives = 259/319 (81%)
 Frame = +3

Query: 102  TWYDSLLRHVSVYGIAAGYCISASLLSIINKWAVMKFPYPGALTALQYFTSAAGVLLFGK 281
            TWY  LL+  S+YG+AAGYCISASLLSIINKWAVMKFPYPGALTALQYFTSAAGVL+ G 
Sbjct: 2    TWYSGLLKLTSIYGVAAGYCISASLLSIINKWAVMKFPYPGALTALQYFTSAAGVLVCGW 61

Query: 282  LRILEHDSLEFLTMWRFLPAAMIFYLSLFTNSELLLHANVDTFIVFRSAVPIFVAIGEAL 461
             R++EHDSL+ LTMWRFLPAA++FYLSLFTNSELLLHANVDTFIVFRS VPIFVAIGE L
Sbjct: 62   FRVVEHDSLDLLTMWRFLPAAVMFYLSLFTNSELLLHANVDTFIVFRSIVPIFVAIGETL 121

Query: 462  YLHQPWPSIRTWLSLSTIFAGSVLYVLTDYQFTLTAYSWALAYLISMTVDFVYIKHVVMT 641
            +LHQPWPS++TWLSL+TIF GSVLYVLTDYQFT+ AYSWA+AYL+SMT+DFVYIKHVVMT
Sbjct: 122  FLHQPWPSLKTWLSLATIFGGSVLYVLTDYQFTVMAYSWAVAYLVSMTIDFVYIKHVVMT 181

Query: 642  VGLNTWGXXXXXXXXXXXXXXXXXXXXXXXKKIKHEITDESDWHSFAVVLPVGLSCLFGL 821
            +GLNTWG                       KKIKHEI+DESDWHSF VVLPVGLSCLFGL
Sbjct: 182  IGLNTWGLVLYNNLEALLLFPLELLIMGELKKIKHEISDESDWHSFGVVLPVGLSCLFGL 241

Query: 822  AISFFGFSCRRAISATGFTVLGIVNKLLTVVINLIIWDKHSTVVXXXXXXXXXXXXXXYQ 1001
            AISFFGFSCRRAISATG+TVLG+VNKLLTVVINL++WDKHST +              YQ
Sbjct: 242  AISFFGFSCRRAISATGYTVLGVVNKLLTVVINLVVWDKHSTFIGTVGLLICMLGGIMYQ 301

Query: 1002 QSTSNKPKVIEAAAKAGDE 1058
            QSTS    V E  A+  DE
Sbjct: 302  QSTSKPKAVPEVKAEQTDE 320


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