BLASTX nr result
ID: Coptis21_contig00011512
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00011512
(1429 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002306135.1| predicted protein [Populus trichocarpa] gi|2... 153 1e-34
ref|XP_002267100.2| PREDICTED: zinc finger CCCH domain-containin... 148 3e-33
emb|CBI17411.3| unnamed protein product [Vitis vinifera] 148 3e-33
ref|XP_002313011.1| predicted protein [Populus trichocarpa] gi|2... 147 9e-33
emb|CBI37995.3| unnamed protein product [Vitis vinifera] 144 7e-32
>ref|XP_002306135.1| predicted protein [Populus trichocarpa] gi|222849099|gb|EEE86646.1|
predicted protein [Populus trichocarpa]
Length = 393
Score = 153 bits (386), Expect = 1e-34
Identities = 94/203 (46%), Positives = 120/203 (59%), Gaps = 7/203 (3%)
Frame = +3
Query: 30 KEEPADRLFEAYADQVSNSRSYSEQHVVISSTTKKVRRQEGSSIEA-IPGT---DEGMPV 197
K+E AD L++ + D S S S ++ V S K +R + E PG+ EG
Sbjct: 92 KQELADELYDVHNDGGSGSDSSADAEVTTSRRRKPKKRLRSRAKEKDSPGSVSWAEGESA 151
Query: 198 SNGTEWASNELLEFVSHMKHGDTSVLSYFDVQALLVEYIARNNLYVPHQKSRILCDSRLQ 377
EWAS ELLEFV HMK+GD S S FDVQALL++YI RN L P +KS+I+CDSRL+
Sbjct: 152 DESVEWASKELLEFVMHMKNGDKSACSQFDVQALLLDYIKRNKLRDPRRKSQIICDSRLE 211
Query: 378 RLFGKTCMGQFEMFKLLRSH-LMKKDNHADHIQGRLFDANRSQIEV--SSEPLRKVIPDK 548
LFGK +G FEM KLL SH L+K D+ AD +QG + D SQ+E +S+ L K DK
Sbjct: 212 NLFGKPRVGHFEMLKLLESHFLLKDDSQADDLQGSVVDTESSQLEADGNSDALTKASKDK 271
Query: 549 LAKIIKTGGHALPETNYDDCAAI 617
K K G ++N DD AAI
Sbjct: 272 RRKSRKKGEGRGLQSNIDDYAAI 294
>ref|XP_002267100.2| PREDICTED: zinc finger CCCH domain-containing protein 44-like
[Vitis vinifera]
Length = 1643
Score = 148 bits (374), Expect = 3e-33
Identities = 94/208 (45%), Positives = 127/208 (61%), Gaps = 10/208 (4%)
Frame = +3
Query: 30 KEEPADRLFEAYADQVSNSRSYSEQHVVISSTTKKVRRQ-----EGSSIEAIPGTDEGMP 194
K E +D L++A D+ S+S S S +S +K ++Q + +S+ D
Sbjct: 271 KGESSDELYDANDDKGSSSDSSSGHQEANTSKRRKTKKQPKFLNKDNSLNVGRSDDSKRT 330
Query: 195 -VSNGTEWASNELLEFVSHMKHGDTSVLSYFDVQALLVEYIARNNLYVPHQKSRILCDSR 371
+ GTEWAS ELLE V HMK+GDTSVLS FDVQALL+EYI RNNL P +KS+I+CD R
Sbjct: 331 CLPEGTEWASKELLELVGHMKNGDTSVLSQFDVQALLLEYIKRNNLRDPRRKSQIICDMR 390
Query: 372 LQRLFGKTCMGQFEMFKLLRSH-LMKKDNHADHI-QGRLFDANRSQIEV--SSEPLRKVI 539
L+ LFGK +G FEM KLL SH L+K+ + AD I +G + D SQ++ +++ +I
Sbjct: 391 LRNLFGKARVGHFEMLKLLESHFLIKEHSRADDIMRGGVVDTLASQVDADENNDYQLMII 450
Query: 540 PDKLAKIIKTGGHALPETNYDDCAAIVV 623
DK K K G P+TN D+ AAI V
Sbjct: 451 KDKKRKTRKKGDERGPQTNLDEYAAIDV 478
Score = 94.0 bits (232), Expect = 9e-17
Identities = 78/245 (31%), Positives = 116/245 (47%), Gaps = 46/245 (18%)
Frame = +3
Query: 678 ERTDGSSWNREIDDPQTNNLDKVRNQVP-----------------------ASETVQASI 788
ER SS N+ D +N +K RNQV ASET ++
Sbjct: 870 EREKESSQNQGGDAYGSNCWEKPRNQVDPIGSVTGGCTNQAVVRSGLSSGVASETSTTTL 929
Query: 789 VS--------TRDRLWCYQDPSGKIQGPFSILQLCKWSTTASFPANLRIWRTVEMQEDSI 944
+ D++W YQDP+GKIQGPF ++QL KWS FP +LRIWR E Q+DSI
Sbjct: 930 STGTVLSANNENDKIWHYQDPAGKIQGPFGMVQLRKWSANGFFPPHLRIWRMNEKQDDSI 989
Query: 945 LLIDALNTTFSR-----------AQKVAAAYEDESVNGCKGMDSSLTRT--DNQQIDLTW 1085
LL DA+N + + +Q+V +D N G++ S+ T N+ +
Sbjct: 990 LLTDAMNLQYHKEPPLQNNSLLQSQQVRVVSKDRENNWDGGLNGSMNATWIGNKLNEGPG 1049
Query: 1086 DSDLKGAIGLASCNLEAGKSDGLSSAPTVGT--AETLDLKVVGSGNPSYGRGSLNGNNTI 1259
+S+ +++ N E K DG S + + A+ ++ K V G+ S G SL GN++
Sbjct: 1050 NSN---DATISNGNNELVKRDGWGSCSSSWSTPADIMNSKEVEIGSFSQGWDSLKGNSSW 1106
Query: 1260 SASPE 1274
S P+
Sbjct: 1107 SDQPQ 1111
>emb|CBI17411.3| unnamed protein product [Vitis vinifera]
Length = 1362
Score = 148 bits (374), Expect = 3e-33
Identities = 94/208 (45%), Positives = 127/208 (61%), Gaps = 10/208 (4%)
Frame = +3
Query: 30 KEEPADRLFEAYADQVSNSRSYSEQHVVISSTTKKVRRQ-----EGSSIEAIPGTDEGMP 194
K E +D L++A D+ S+S S S +S +K ++Q + +S+ D
Sbjct: 271 KGESSDELYDANDDKGSSSDSSSGHQEANTSKRRKTKKQPKFLNKDNSLNVGRSDDSKRT 330
Query: 195 -VSNGTEWASNELLEFVSHMKHGDTSVLSYFDVQALLVEYIARNNLYVPHQKSRILCDSR 371
+ GTEWAS ELLE V HMK+GDTSVLS FDVQALL+EYI RNNL P +KS+I+CD R
Sbjct: 331 CLPEGTEWASKELLELVGHMKNGDTSVLSQFDVQALLLEYIKRNNLRDPRRKSQIICDMR 390
Query: 372 LQRLFGKTCMGQFEMFKLLRSH-LMKKDNHADHI-QGRLFDANRSQIEV--SSEPLRKVI 539
L+ LFGK +G FEM KLL SH L+K+ + AD I +G + D SQ++ +++ +I
Sbjct: 391 LRNLFGKARVGHFEMLKLLESHFLIKEHSRADDIMRGGVVDTLASQVDADENNDYQLMII 450
Query: 540 PDKLAKIIKTGGHALPETNYDDCAAIVV 623
DK K K G P+TN D+ AAI V
Sbjct: 451 KDKKRKTRKKGDERGPQTNLDEYAAIDV 478
Score = 94.4 bits (233), Expect = 7e-17
Identities = 78/250 (31%), Positives = 116/250 (46%), Gaps = 46/250 (18%)
Frame = +3
Query: 678 ERTDGSSWNREIDDPQTNNLDKVRNQVP-----------------------ASETVQASI 788
ER SS N+ D +N +K RNQV ASET ++
Sbjct: 790 EREKESSQNQGGDAYGSNCWEKPRNQVDPIGSVTGGCTNQAVVRSGLSSGVASETSTTTL 849
Query: 789 VS--------TRDRLWCYQDPSGKIQGPFSILQLCKWSTTASFPANLRIWRTVEMQEDSI 944
+ D++W YQDP+GKIQGPF ++QL KWS FP +LRIWR E Q+DSI
Sbjct: 850 STGTVLSANNENDKIWHYQDPAGKIQGPFGMVQLRKWSANGFFPPHLRIWRMNEKQDDSI 909
Query: 945 LLIDALNTTFSR-----------AQKVAAAYEDESVNGCKGMDSSLTRT--DNQQIDLTW 1085
LL DA+N + + +Q+V +D N G++ S+ T N+ +
Sbjct: 910 LLTDAMNLQYHKEPPLQNNSLLQSQQVRVVSKDRENNWDGGLNGSMNATWIGNKLNEGPG 969
Query: 1086 DSDLKGAIGLASCNLEAGKSDGLSSAPTVGT--AETLDLKVVGSGNPSYGRGSLNGNNTI 1259
+S+ +++ N E K DG S + + A+ ++ K V G+ S G SL GN +
Sbjct: 970 NSN---DATISNGNNELVKRDGWGSCSSSWSTPADIMNSKEVEIGSFSQGWDSLKGNTVV 1026
Query: 1260 SASPERTSQS 1289
+ + QS
Sbjct: 1027 QVNSGHSGQS 1036
>ref|XP_002313011.1| predicted protein [Populus trichocarpa] gi|222849419|gb|EEE86966.1|
predicted protein [Populus trichocarpa]
Length = 408
Score = 147 bits (370), Expect = 9e-33
Identities = 89/204 (43%), Positives = 120/204 (58%), Gaps = 8/204 (3%)
Frame = +3
Query: 30 KEEPADRLFEAYADQVSNSRSYSEQHVVISSTTKKVRRQEGSSIEA--IPGTDE---GMP 194
K+E AD L++ + + SE V +S +K +++ S + PG+ G
Sbjct: 98 KQELADELYDVHNGGSGSGPDSSENAEVTTSKRRKPKKRLRSRAKERDSPGSSSWAGGES 157
Query: 195 VSNGTEWASNELLEFVSHMKHGDTSVLSYFDVQALLVEYIARNNLYVPHQKSRILCDSRL 374
EWAS ELLEFV H+K+GD S S FDVQALL+EYI RN L PH+KS+I+CDSRL
Sbjct: 158 ADESVEWASKELLEFVMHVKNGDKSACSQFDVQALLLEYIKRNKLRDPHRKSQIICDSRL 217
Query: 375 QRLFGKTCMGQFEMFKLLRSH-LMKKDNHADHIQGRLFDANRSQIEV--SSEPLRKVIPD 545
+ LFGK +G FEM KLL SH L+K D+ AD +QG + D +Q+E +S+ L K D
Sbjct: 218 ENLFGKPRVGHFEMLKLLESHYLLKDDSQADDLQGSVVDTEANQLEADGNSDALMKASKD 277
Query: 546 KLAKIIKTGGHALPETNYDDCAAI 617
K + K G ++N DD AAI
Sbjct: 278 KRRRSRKKGEGRGLQSNIDDYAAI 301
>emb|CBI37995.3| unnamed protein product [Vitis vinifera]
Length = 868
Score = 144 bits (362), Expect = 7e-32
Identities = 83/166 (50%), Positives = 105/166 (63%), Gaps = 3/166 (1%)
Frame = +3
Query: 129 KKVRRQEGSSIEAIPGTDEGMPVSNGTEWASNELLEFVSHMKHGDTSVLSYFDVQALLVE 308
K + ++ S A EG TEWAS ELLEFV HMK+GD SV S FDVQALL+E
Sbjct: 316 KSLNKERDSPSVATAIGAEGTSTPANTEWASKELLEFVMHMKNGDKSVTSQFDVQALLLE 375
Query: 309 YIARNNLYVPHQKSRILCDSRLQRLFGKTCMGQFEMFKLLRSH-LMKKDNHADHIQGRLF 485
YI RN L P +KS+I+CDSRL+ LFGK +G FEM KLL SH L K+D+ D +QG +
Sbjct: 376 YIKRNKLRDPRRKSQIICDSRLEYLFGKPRVGHFEMLKLLESHFLNKEDSQTDDLQGSVV 435
Query: 486 DANRSQIEV--SSEPLRKVIPDKLAKIIKTGGHALPETNYDDCAAI 617
D+ SQ+EV +++ L KV D+ K K G ++N DD AAI
Sbjct: 436 DSEASQLEVDGNTDTLMKVGKDRRRKARKKGDERGSQSNLDDYAAI 481
Score = 81.6 bits (200), Expect = 5e-13
Identities = 35/62 (56%), Positives = 47/62 (75%)
Frame = +3
Query: 780 ASIVSTRDRLWCYQDPSGKIQGPFSILQLCKWSTTASFPANLRIWRTVEMQEDSILLIDA 959
A+ +S D++W YQDPSG++QGPFS++QL KWS + FP +LRIWRT E Q+DS LL D
Sbjct: 800 AAKLSETDKMWHYQDPSGRVQGPFSLVQLRKWSNSGFFPKDLRIWRTTEKQDDSALLTDV 859
Query: 960 LN 965
+
Sbjct: 860 FH 861