BLASTX nr result

ID: Coptis21_contig00011411 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011411
         (1119 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267522.1| PREDICTED: uncharacterized protein LOC100260...   218   2e-54
ref|XP_002513604.1| conserved hypothetical protein [Ricinus comm...   214   2e-53
gb|AFK42684.1| unknown [Lotus japonicus]                              197   3e-48
ref|XP_003602173.1| hypothetical protein MTR_3g090640 [Medicago ...   192   1e-46
ref|XP_002331825.1| predicted protein [Populus trichocarpa] gi|2...   186   1e-44

>ref|XP_002267522.1| PREDICTED: uncharacterized protein LOC100260370 [Vitis vinifera]
           gi|147771502|emb|CAN66995.1| hypothetical protein
           VITISV_019167 [Vitis vinifera]
          Length = 221

 Score =  218 bits (556), Expect = 2e-54
 Identities = 127/250 (50%), Positives = 149/250 (59%), Gaps = 9/250 (3%)
 Frame = -3

Query: 982 MDFDYRNKV-PPYEAQIPMYRXXXXXXXXXXXS------FYPKVGHPV--GXXXXXXXXX 830
           M +DYRN+   PY++QIPMY+                   YP+V  P             
Sbjct: 1   MSYDYRNRANQPYDSQIPMYKTTTSSSSSAPGHQLYGAPMYPRVSQPSFGAVPPPGRASS 60

Query: 829 XXXXXXXXXXSGLGIRVMIKPEYRITPPPQLLPLMEDIPRSTFQFDFDFERKVLAEAEKE 650
                      GLGIRV+IKPE+RI+PPPQL P + +IPRSTFQFDFD E+K+LAEAEK+
Sbjct: 61  YQQTSAPSSSPGLGIRVVIKPEFRISPPPQLSPQVGEIPRSTFQFDFDLEKKILAEAEKD 120

Query: 649 SPNWSQLVSELKPSESHSSLGTVSNPMGSKYGNSGYRRDAGAGASYGDNPTKSSATDPLV 470
           S NWS+L  E  PS++  S                              P+  S  DP+V
Sbjct: 121 SQNWSRLGLENLPSKALES-----------------------------TPSMGSTADPVV 151

Query: 469 SKYIASGLSREAVPFAVANYGDNPTKVREFVDKYNLLREMGFSSSNVAEALAMYDNDHEK 290
           SKYIASGLSREAVP AVANYGDN TKVREF + Y LLREMGFSSSNVAEAL MYDND +K
Sbjct: 152 SKYIASGLSREAVPLAVANYGDNETKVREFTNGYTLLREMGFSSSNVAEALVMYDNDTDK 211

Query: 289 ALAYFLNSSS 260
           ALA+FLNSSS
Sbjct: 212 ALAHFLNSSS 221


>ref|XP_002513604.1| conserved hypothetical protein [Ricinus communis]
           gi|223547512|gb|EEF49007.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 222

 Score =  214 bits (546), Expect = 2e-53
 Identities = 128/254 (50%), Positives = 150/254 (59%), Gaps = 13/254 (5%)
 Frame = -3

Query: 982 MDFDYRNKVP--PYEAQIPMYRXXXXXXXXXXXSF----YPKVGHPVGXXXXXXXXXXXX 821
           MD+D+RN+     Y++Q PMYR            +    YP++G   G            
Sbjct: 1   MDYDFRNRTTGSSYDSQTPMYRTTSSSTPSGHPMYGQSLYPRIGQQQGHTPVPPVGRHSS 60

Query: 820 XXXXXXXS----GLGIRVMIKPEYRITPPPQLLPLMEDIPRSTFQFDFDFERKVLAEAEK 653
                       GLGIRV +KPEYRITPPPQL P M DIPRS FQF FD ER++LAEAEK
Sbjct: 61  YHQSSAPPPSSSGLGIRVSVKPEYRITPPPQLAPQMGDIPRSNFQFHFDLERRILAEAEK 120

Query: 652 ESPNWSQLVSELKPS---ESHSSLGTVSNPMGSKYGNSGYRRDAGAGASYGDNPTKSSAT 482
           +  NWS+L  E  PS   ES SSLG                                SA 
Sbjct: 121 DIQNWSKLGLENLPSKTTESTSSLG--------------------------------SAA 148

Query: 481 DPLVSKYIASGLSREAVPFAVANYGDNPTKVREFVDKYNLLREMGFSSSNVAEALAMYDN 302
           DP+VSKYIASGL+REAVP AVANYGDNPTKVREFV+ ++LLREMGFS++NVAEAL MYDN
Sbjct: 149 DPVVSKYIASGLNREAVPLAVANYGDNPTKVREFVNGFSLLREMGFSANNVAEALLMYDN 208

Query: 301 DHEKALAYFLNSSS 260
           D +KAL +FLNSSS
Sbjct: 209 DTDKALTHFLNSSS 222


>gb|AFK42684.1| unknown [Lotus japonicus]
          Length = 211

 Score =  197 bits (502), Expect = 3e-48
 Identities = 119/242 (49%), Positives = 146/242 (60%), Gaps = 1/242 (0%)
 Frame = -3

Query: 982 MDFDYRNKVPPYEAQIPMYRXXXXXXXXXXXSFYPKVG-HPVGXXXXXXXXXXXXXXXXX 806
           MD+D+R +    + Q PMYR             YPK+G HP G                 
Sbjct: 1   MDYDFRTRSG--QQQPPMYRAPPSSSSPSS--IYPKIGPHPPGAAVGRPSSYHQNPAPPS 56

Query: 805 XXSGLGIRVMIKPEYRITPPPQLLPLMEDIPRSTFQFDFDFERKVLAEAEKESPNWSQLV 626
              GLGIRV IKP+YRITPPP LLP + DIPRS FQFDF  ERKVLAE EK++PNWS+  
Sbjct: 57  SS-GLGIRVAIKPDYRITPPPHLLPHVVDIPRSNFQFDFGLERKVLAEGEKDNPNWSKFG 115

Query: 625 SELKPSESHSSLGTVSNPMGSKYGNSGYRRDAGAGASYGDNPTKSSATDPLVSKYIASGL 446
            E  P++       VS+   S                   +  K +++DP VSKYIA GL
Sbjct: 116 LENLPTK-------VSDHTSS-------------------SSPKVTSSDPTVSKYIAMGL 149

Query: 445 SREAVPFAVANYGDNPTKVREFVDKYNLLREMGFSSSNVAEALAMYDNDHEKALAYFLNS 266
           +REAVP A+ +YGDNPTKV+EFV+ Y LLREMGFSSS+VAEAL M+DND +KALA+FL+ 
Sbjct: 150 NREAVPIAIGHYGDNPTKVQEFVNGYTLLREMGFSSSSVAEALVMHDNDTDKALAHFLSG 209

Query: 265 SS 260
           SS
Sbjct: 210 SS 211


>ref|XP_003602173.1| hypothetical protein MTR_3g090640 [Medicago truncatula]
           gi|355491221|gb|AES72424.1| hypothetical protein
           MTR_3g090640 [Medicago truncatula]
          Length = 203

 Score =  192 bits (489), Expect = 1e-46
 Identities = 113/242 (46%), Positives = 138/242 (57%), Gaps = 1/242 (0%)
 Frame = -3

Query: 982 MDFDY-RNKVPPYEAQIPMYRXXXXXXXXXXXSFYPKVGHPVGXXXXXXXXXXXXXXXXX 806
           M+++Y R++  P   Q+PMYR             YPK+G                     
Sbjct: 1   MEYEYNRSRSGP---QVPMYRAPPS--------IYPKIGPHPHSAAPRPPPFQHQNPNPS 49

Query: 805 XXSGLGIRVMIKPEYRITPPPQLLPLMEDIPRSTFQFDFDFERKVLAEAEKESPNWSQLV 626
              GLGI+V IKPEY+I PPP LLP + DIPRS FQFDF  ERK+LAEAEKE+PNW++  
Sbjct: 50  PSIGLGIKVAIKPEYKIAPPPHLLPHVGDIPRSNFQFDFGLERKILAEAEKENPNWTKFG 109

Query: 625 SELKPSESHSSLGTVSNPMGSKYGNSGYRRDAGAGASYGDNPTKSSATDPLVSKYIASGL 446
            E  P++                            AS     +K +  DP+V+KYIA GL
Sbjct: 110 VENLPTK----------------------------ASDSSPSSKVTTADPIVNKYIAMGL 141

Query: 445 SREAVPFAVANYGDNPTKVREFVDKYNLLREMGFSSSNVAEALAMYDNDHEKALAYFLNS 266
           SR+ VP AV NYGDNPTKV+EFV  Y LL EMGFSS++V EAL MYDND +KALAYFLN 
Sbjct: 142 SRDVVPIAVKNYGDNPTKVQEFVKGYTLLHEMGFSSNSVDEALLMYDNDTDKALAYFLNG 201

Query: 265 SS 260
           SS
Sbjct: 202 SS 203


>ref|XP_002331825.1| predicted protein [Populus trichocarpa] gi|222875063|gb|EEF12194.1|
           predicted protein [Populus trichocarpa]
          Length = 223

 Score =  186 bits (471), Expect = 1e-44
 Identities = 115/251 (45%), Positives = 144/251 (57%), Gaps = 11/251 (4%)
 Frame = -3

Query: 982 MDFDYRNKVP-PYEAQIPMYRXXXXXXXXXXXS-------FYPKVGHP--VGXXXXXXXX 833
           MD+D+RN+   PY+    M+R                    YP V  P            
Sbjct: 1   MDYDFRNRTSSPYDTPSTMHRSSTPSTAPQPSHPMYGPPSLYPTVNQPGHTVIPHAPRHH 60

Query: 832 XXXXXXXXXXXSGLGIRVMIKPEYRITPPPQLLPLMEDIPRSTFQFDFDFERKVLAEAEK 653
                      SGLGIRVMIKPEYRITPPPQL P + +IPRS+FQFDF+ ER++LAEAEK
Sbjct: 61  SFTQQAPSSPSSGLGIRVMIKPEYRITPPPQLTPQIVEIPRSSFQFDFELERQILAEAEK 120

Query: 652 ESPNWSQLVS-ELKPSESHSSLGTVSNPMGSKYGNSGYRRDAGAGASYGDNPTKSSATDP 476
           +SPNWS+L+  E  P +    LG  S+ +  KY                          P
Sbjct: 121 DSPNWSRLLGLENSPPKPPPILG--SSLIVGKY--------------------------P 152

Query: 475 LVSKYIASGLSREAVPFAVANYGDNPTKVREFVDKYNLLREMGFSSSNVAEALAMYDNDH 296
           +V KYI+ GL+R+AVP AVANYGDNP KV+EFV+ Y LL+EMGF S+ VAEAL MYDN+ 
Sbjct: 153 VVRKYISMGLNRDAVPLAVANYGDNPPKVQEFVNGYTLLQEMGFPSNKVAEALLMYDNNT 212

Query: 295 EKALAYFLNSS 263
           ++ALA+FLNSS
Sbjct: 213 DEALAHFLNSS 223


Top