BLASTX nr result

ID: Coptis21_contig00011216 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011216
         (883 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273059.1| PREDICTED: uncharacterized protein LOC100263...   221   1e-55
emb|CAN80128.1| hypothetical protein VITISV_041592 [Vitis vinifera]   217   2e-54
ref|XP_002307800.1| predicted protein [Populus trichocarpa] gi|2...   187   2e-45
ref|XP_002510697.1| conserved hypothetical protein [Ricinus comm...   178   2e-42
ref|XP_002893129.1| hypothetical protein ARALYDRAFT_472313 [Arab...   177   4e-42

>ref|XP_002273059.1| PREDICTED: uncharacterized protein LOC100263247 [Vitis vinifera]
           gi|297745570|emb|CBI40735.3| unnamed protein product
           [Vitis vinifera]
          Length = 230

 Score =  221 bits (564), Expect = 1e-55
 Identities = 122/218 (55%), Positives = 158/218 (72%), Gaps = 4/218 (1%)
 Frame = -3

Query: 848 EKEISDECTKEEDGKVLQFLDSMDSYLTLMDSLSSTLRQGWIELASARYSMGASRVTSAL 669
           E ++ +E   EE+  V+ FLDSMD+YLTL+DSLSSTLRQGW+ELASAR+SMGASR++S+L
Sbjct: 11  ENQLEEEQLDEEEN-VVTFLDSMDAYLTLIDSLSSTLRQGWLELASARHSMGASRISSSL 69

Query: 668 YDLKLHPAVTTLQVRQLDGESPRQDPMVEEPHFTLSRWLYSSEENCYSRETGSDDEDPQN 489
           +DLKLH A T+L+V + D      D  + +PHFTL +W  S    C S E   D ++ Q 
Sbjct: 70  FDLKLHSAATSLRVTEDD-----VDSKMNQPHFTLCKWASSDNGKCCSGEAKFDGDELQK 124

Query: 488 KNSSSLLRHRGTSQYPDDKEFRRNA----SPVSPRSPLTGDDQVQKERSKSLSVFGKLVS 321
           K+ SS LR+RGTSQ+ + +E +  +    SP S  SPL+ D  VQK+R KSLSVFG LVS
Sbjct: 125 KSVSSQLRYRGTSQFDEPQEIQEKSPTCKSPTSNGSPLSLDSPVQKQRHKSLSVFGTLVS 184

Query: 320 PKLREAQVSFETALETLIKIANVRSLMLSAHAQVQQDL 207
           PKLR AQ SFETALET+++IAN+RS MLSA  QVQ+D+
Sbjct: 185 PKLRAAQFSFETALETIVEIANMRSSMLSAFDQVQKDI 222


>emb|CAN80128.1| hypothetical protein VITISV_041592 [Vitis vinifera]
          Length = 225

 Score =  217 bits (553), Expect = 2e-54
 Identities = 120/216 (55%), Positives = 154/216 (71%)
 Frame = -3

Query: 854 RTEKEISDECTKEEDGKVLQFLDSMDSYLTLMDSLSSTLRQGWIELASARYSMGASRVTS 675
           RT +   +E   +E+  V+ FLDSMD+YLTL+DSLSSTLRQGW+ELASAR+SMGASR++S
Sbjct: 8   RTSENQLEEEQLDEEENVVTFLDSMDAYLTLIDSLSSTLRQGWLELASARHSMGASRISS 67

Query: 674 ALYDLKLHPAVTTLQVRQLDGESPRQDPMVEEPHFTLSRWLYSSEENCYSRETGSDDEDP 495
           +L+DLKLH A T+L+V + D      D  + +PHFTL +W  S    C S E   D ++ 
Sbjct: 68  SLFDLKLHSAATSLRVTEDD-----VDSKMNQPHFTLCKWASSDNGKCCSGEAKFDGDEL 122

Query: 494 QNKNSSSLLRHRGTSQYPDDKEFRRNASPVSPRSPLTGDDQVQKERSKSLSVFGKLVSPK 315
           Q K+ S  LR+RGTSQ  + +E +   SP S  SPL+ D  VQK+R KSLSVFG LVSPK
Sbjct: 123 QKKSVSXQLRYRGTSQXDEPQEIQEK-SPTSNGSPLSLDSPVQKQRHKSLSVFGTLVSPK 181

Query: 314 LREAQVSFETALETLIKIANVRSLMLSAHAQVQQDL 207
           LR AQ SFETALE +++IAN+RS MLSA  QVQ+D+
Sbjct: 182 LRAAQFSFETALEXIVEIANMRSSMLSAFDQVQKDI 217


>ref|XP_002307800.1| predicted protein [Populus trichocarpa] gi|222857249|gb|EEE94796.1|
           predicted protein [Populus trichocarpa]
          Length = 220

 Score =  187 bits (476), Expect = 2e-45
 Identities = 108/203 (53%), Positives = 139/203 (68%), Gaps = 1/203 (0%)
 Frame = -3

Query: 812 DGKVLQFLDSMDSYLTLMDSLSSTLRQGWIELASARYSMGASRVTSALYDLKLHPAVTTL 633
           D  VL+F+DS DSYLTL+DSLSSTLRQGW++LA AR SMGASR+  AL D KLH A T++
Sbjct: 20  DEDVLRFMDSTDSYLTLLDSLSSTLRQGWLDLAIARQSMGASRINGALLDHKLHSAATSV 79

Query: 632 QVRQLDGESPRQDPMVEEPHFTLSRWLYSSE-ENCYSRETGSDDEDPQNKNSSSLLRHRG 456
           QV Q D      D M  +P F L +W   ++ + CY  +   +D+ P  K+ S  LRHRG
Sbjct: 80  QVDQED-----VDSMEAQPRFILRKWASVADGKQCYEEQKLGEDKLP-GKSGSLQLRHRG 133

Query: 455 TSQYPDDKEFRRNASPVSPRSPLTGDDQVQKERSKSLSVFGKLVSPKLREAQVSFETALE 276
            SQ  ++K     A        L  DDQVQKER+K LS+FG L+SPKLR AQ+SFETALE
Sbjct: 134 DSQLSEEKTSESGAQ-------LDVDDQVQKERAKLLSMFGTLISPKLRAAQLSFETALE 186

Query: 275 TLIKIANVRSLMLSAHAQVQQDL 207
           TL+KIAN+RS MLS++ +V+++L
Sbjct: 187 TLVKIANMRSAMLSSYDRVRKEL 209


>ref|XP_002510697.1| conserved hypothetical protein [Ricinus communis]
           gi|223551398|gb|EEF52884.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 212

 Score =  178 bits (451), Expect = 2e-42
 Identities = 112/218 (51%), Positives = 141/218 (64%), Gaps = 3/218 (1%)
 Frame = -3

Query: 848 EKEISDECTKEED--GKVLQFLDSMDSYLTLMDSLSSTLRQGWIELASARYSMGASRVTS 675
           E+E  D+  +E+D    VLQFLDS+DSYLTL DSLSSTLRQGW+ELASAR+SMGA R+ S
Sbjct: 21  EEEEEDKQQEEQDIDDNVLQFLDSVDSYLTLFDSLSSTLRQGWLELASARHSMGALRLNS 80

Query: 674 ALYDLKLHPAVTTLQV-RQLDGESPRQDPMVEEPHFTLSRWLYSSEENCYSRETGSDDED 498
           +L DLK HPA T+LQ+ +  +G          EP F L +WL               D D
Sbjct: 81  SLLDLKSHPASTSLQLTKHHEG----------EPQFILRKWL------------SLGDCD 118

Query: 497 PQNKNSSSLLRHRGTSQYPDDKEFRRNASPVSPRSPLTGDDQVQKERSKSLSVFGKLVSP 318
            QN N   LL   GT Q  +++   + AS          DD+VQKERS+SLSVFG LVSP
Sbjct: 119 EQNTN-DDLLEKSGTPQLSEEETSPKQASS-------KADDKVQKERSRSLSVFGTLVSP 170

Query: 317 KLREAQVSFETALETLIKIANVRSLMLSAHAQVQQDLH 204
           KLR AQ+SFETALET+++IAN+RS MLSA  +V ++L+
Sbjct: 171 KLRAAQLSFETALETVVEIANMRSAMLSAFDRVHEELN 208


>ref|XP_002893129.1| hypothetical protein ARALYDRAFT_472313 [Arabidopsis lyrata subsp.
           lyrata] gi|297338971|gb|EFH69388.1| hypothetical protein
           ARALYDRAFT_472313 [Arabidopsis lyrata subsp. lyrata]
          Length = 215

 Score =  177 bits (448), Expect = 4e-42
 Identities = 106/224 (47%), Positives = 139/224 (62%), Gaps = 1/224 (0%)
 Frame = -3

Query: 881 GEEQKNGNPRTEKEISDECTKEE-DGKVLQFLDSMDSYLTLMDSLSSTLRQGWIELASAR 705
           G+E  + N   E E+  E  KE  D  VLQFLDS+D YLTLMDSL+S LR+GW +LASAR
Sbjct: 8   GDESMDVN--NEAEVKPEVGKEGGDENVLQFLDSLDGYLTLMDSLNSKLREGWFDLASAR 65

Query: 704 YSMGASRVTSALYDLKLHPAVTTLQVRQLDGESPRQDPMVEEPHFTLSRWLYSSEENCYS 525
           +SMG  R+ S L DLK HPA +TLQV   + ES     +   PHF LS+W  S   +   
Sbjct: 66  HSMGTLRINSTLLDLKYHPAASTLQVTDQEVES-----LGSVPHFALSKWA-SKGGSGKG 119

Query: 524 RETGSDDEDPQNKNSSSLLRHRGTSQYPDDKEFRRNASPVSPRSPLTGDDQVQKERSKSL 345
           ++  +D +       S  LRHRG         F          + L  D++++KER+KSL
Sbjct: 120 KDLSTDTDSEIGSPLSPQLRHRG---------FSEEKPSAKDETILVADEEIKKERAKSL 170

Query: 344 SVFGKLVSPKLREAQVSFETALETLIKIANVRSLMLSAHAQVQQ 213
           SVFG LVSPKLR AQ+SFETALETL++IAN+R+ MLSA  ++++
Sbjct: 171 SVFGGLVSPKLRGAQLSFETALETLVEIANMRASMLSAFERIKE 214


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