BLASTX nr result

ID: Coptis21_contig00010753 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010753
         (605 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003553172.1| PREDICTED: NAD(P)H-quinone oxidoreductase su...   313   1e-83
ref|XP_002532930.1| conserved hypothetical protein [Ricinus comm...   313   2e-83
ref|XP_003600578.1| NAD(P)H-quinone oxidoreductase subunit N [Me...   311   4e-83
gb|ACU23851.1| unknown [Glycine max]                                  311   4e-83
ref|XP_002275876.2| PREDICTED: NAD(P)H-quinone oxidoreductase su...   309   2e-82

>ref|XP_003553172.1| PREDICTED: NAD(P)H-quinone oxidoreductase subunit N-like [Glycine
           max]
          Length = 229

 Score =  313 bits (802), Expect = 1e-83
 Identities = 145/177 (81%), Positives = 164/177 (92%), Gaps = 1/177 (0%)
 Frame = +3

Query: 9   SNSRKRRGVVKC-GIEDFIGGDLVKFDLGRWLNDVEEHKSLAIYTPHEGGYEGRYLTRLR 185
           +N+ KR G+V+C G+ DFIGGDL+KFDLGRWL+DVEEHK+LAIY PHEGGYEGRYL+RL+
Sbjct: 53  NNTSKRVGIVQCRGLGDFIGGDLIKFDLGRWLSDVEEHKALAIYPPHEGGYEGRYLSRLK 112

Query: 186 YQGYKFLDLSARGLGDPETTLTKIHPVCPAHLGRQPIARWYFPPEVDYRLSLLPPDAKGL 365
            QGY FLDL+ARGLGDPETTLTKIHPVCP H+G+QPIARWYFPPEVDYRL  LPP+AKGL
Sbjct: 113 RQGYYFLDLTARGLGDPETTLTKIHPVCPPHVGKQPIARWYFPPEVDYRLEALPPNAKGL 172

Query: 366 VVWVLEAKVLSKAELQFLALLPTLRPRVKVIAECGNWRKFMWKPLKEIAGLSANEAA 536
           VVW++EAKVLSKAELQFLALLPTLRP V+VIAECGNWRKFMWKPLKEIAGL+ +E A
Sbjct: 173 VVWIIEAKVLSKAELQFLALLPTLRPNVRVIAECGNWRKFMWKPLKEIAGLTTSEEA 229


>ref|XP_002532930.1| conserved hypothetical protein [Ricinus communis]
           gi|223527306|gb|EEF29457.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 226

 Score =  313 bits (801), Expect = 2e-83
 Identities = 149/176 (84%), Positives = 164/176 (93%), Gaps = 4/176 (2%)
 Frame = +3

Query: 9   SNSRKRR-GVVKC---GIEDFIGGDLVKFDLGRWLNDVEEHKSLAIYTPHEGGYEGRYLT 176
           S S+KR  GVV+C   GI DFIGGDLVKFDL +WL+DVEEHK+LAIYTPHEGGYEGRY T
Sbjct: 46  SKSKKRAVGVVRCSGIGIGDFIGGDLVKFDLEQWLSDVEEHKALAIYTPHEGGYEGRYFT 105

Query: 177 RLRYQGYKFLDLSARGLGDPETTLTKIHPVCPAHLGRQPIARWYFPPEVDYRLSLLPPDA 356
           RLRYQGY FLDL+ARGLGDPETTLTKIHPVCPAH+G+QPIARWYFPPEVDYRL+ LPPDA
Sbjct: 106 RLRYQGYYFLDLTARGLGDPETTLTKIHPVCPAHVGKQPIARWYFPPEVDYRLAALPPDA 165

Query: 357 KGLVVWVLEAKVLSKAELQFLALLPTLRPRVKVIAECGNWRKFMWKPLKEIAGLSA 524
           KGLVVW++EAKVLSKAELQFLALLP+LRP+V+VIAECGNWRK MWKPLKEIAGL+A
Sbjct: 166 KGLVVWIIEAKVLSKAELQFLALLPSLRPKVRVIAECGNWRKVMWKPLKEIAGLTA 221


>ref|XP_003600578.1| NAD(P)H-quinone oxidoreductase subunit N [Medicago truncatula]
           gi|355489626|gb|AES70829.1| NAD(P)H-quinone
           oxidoreductase subunit N [Medicago truncatula]
          Length = 224

 Score =  311 bits (798), Expect = 4e-83
 Identities = 145/179 (81%), Positives = 163/179 (91%), Gaps = 4/179 (2%)
 Frame = +3

Query: 12  NSRKRRGVVKC----GIEDFIGGDLVKFDLGRWLNDVEEHKSLAIYTPHEGGYEGRYLTR 179
           NS + + VVKC    G+ DFIGGDLVKFD+GRWL+DVEEHK+LAIYTPHEGGYEGRYL+R
Sbjct: 46  NSNRSKRVVKCSSGIGLGDFIGGDLVKFDIGRWLSDVEEHKALAIYTPHEGGYEGRYLSR 105

Query: 180 LRYQGYKFLDLSARGLGDPETTLTKIHPVCPAHLGRQPIARWYFPPEVDYRLSLLPPDAK 359
           L+ QGY FLDL+ARGLGDPETTLTK+HPVCPAHLG+QPIARWYFPPEVDYRL  LPP+AK
Sbjct: 106 LQRQGYYFLDLTARGLGDPETTLTKVHPVCPAHLGKQPIARWYFPPEVDYRLEALPPNAK 165

Query: 360 GLVVWVLEAKVLSKAELQFLALLPTLRPRVKVIAECGNWRKFMWKPLKEIAGLSANEAA 536
           GLVVW++EAKVLSKAELQFLALLPTLRP V+VIAECGNWRKFMWKPL EIAGL+ ++ A
Sbjct: 166 GLVVWIIEAKVLSKAELQFLALLPTLRPNVRVIAECGNWRKFMWKPLNEIAGLTTSQEA 224


>gb|ACU23851.1| unknown [Glycine max]
          Length = 229

 Score =  311 bits (798), Expect = 4e-83
 Identities = 144/177 (81%), Positives = 163/177 (92%), Gaps = 1/177 (0%)
 Frame = +3

Query: 9   SNSRKRRGVVKC-GIEDFIGGDLVKFDLGRWLNDVEEHKSLAIYTPHEGGYEGRYLTRLR 185
           +N+ KR G+V+C G+ DFIGGDL+KFDLGRWL+DVEEHK+LAIY PHEGGYEGRYL+RL+
Sbjct: 53  NNTSKRVGIVQCRGLGDFIGGDLIKFDLGRWLSDVEEHKALAIYPPHEGGYEGRYLSRLK 112

Query: 186 YQGYKFLDLSARGLGDPETTLTKIHPVCPAHLGRQPIARWYFPPEVDYRLSLLPPDAKGL 365
            QGY FLDL+ARGLGDPETTLTKIHPVCP H+G+QPIARWYFPPEVDYRL  LPP+AKGL
Sbjct: 113 RQGYYFLDLTARGLGDPETTLTKIHPVCPPHVGKQPIARWYFPPEVDYRLEALPPNAKGL 172

Query: 366 VVWVLEAKVLSKAELQFLALLPTLRPRVKVIAECGNWRKFMWKPLKEIAGLSANEAA 536
           VVW++EAKVLSKAELQFLALLPTLRP V+VI ECGNWRKFMWKPLKEIAGL+ +E A
Sbjct: 173 VVWIIEAKVLSKAELQFLALLPTLRPNVRVIVECGNWRKFMWKPLKEIAGLTTSEEA 229


>ref|XP_002275876.2| PREDICTED: NAD(P)H-quinone oxidoreductase subunit N [Vitis
           vinifera] gi|297745733|emb|CBI15789.3| unnamed protein
           product [Vitis vinifera]
          Length = 187

 Score =  309 bits (792), Expect = 2e-82
 Identities = 146/181 (80%), Positives = 161/181 (88%), Gaps = 8/181 (4%)
 Frame = +3

Query: 18  RKRRGVVKC--------GIEDFIGGDLVKFDLGRWLNDVEEHKSLAIYTPHEGGYEGRYL 173
           R    VV+C        GI D +GGDLVK DLGRWL+DVEEHK+LAIY+PHEGGYEGRYL
Sbjct: 7   RSSYSVVRCSGGGGGGIGIGDLVGGDLVKLDLGRWLSDVEEHKALAIYSPHEGGYEGRYL 66

Query: 174 TRLRYQGYKFLDLSARGLGDPETTLTKIHPVCPAHLGRQPIARWYFPPEVDYRLSLLPPD 353
            RLRYQGY FLDLSARGLGDPETTLT+IHPVCPAH+G+QPIARWYFPPEVDYRLSLLPP+
Sbjct: 67  NRLRYQGYYFLDLSARGLGDPETTLTEIHPVCPAHVGKQPIARWYFPPEVDYRLSLLPPN 126

Query: 354 AKGLVVWVLEAKVLSKAELQFLALLPTLRPRVKVIAECGNWRKFMWKPLKEIAGLSANEA 533
           AKGLVVW++EAKVLSK+ELQFLALLPTLRP+V+VIAECGNWRKFMWKPLKEIA L+ NE 
Sbjct: 127 AKGLVVWIIEAKVLSKSELQFLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAALTGNED 186

Query: 534 A 536
           A
Sbjct: 187 A 187


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