BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010746
         (816 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270185.1| PREDICTED: high mobility group B protein 1 i...   130   5e-28
ref|XP_002269398.1| PREDICTED: high mobility group B protein 1 i...   130   5e-28
gb|AEV43366.1| group B HMG-box protein [Citrus sinensis]              125   1e-26
ref|XP_002279947.2| PREDICTED: high mobility group B protein 1-l...   125   1e-26
ref|XP_002316220.1| high mobility group family [Populus trichoca...   122   1e-25

>ref|XP_002270185.1| PREDICTED: high mobility group B protein 1 isoform 2 [Vitis
           vinifera]
          Length = 156

 Score =  130 bits (326), Expect = 5e-28
 Identities = 73/128 (57%), Positives = 77/128 (60%)
 Frame = +3

Query: 114 MKPTKGKGAVKKDTKETLKPAEDXXXXXXXXXXXXXXXXXXQXXXXXXXXXXXXXXXXXX 293
           MK TKGK A +KD KE LKP ED                                     
Sbjct: 1   MKVTKGKAAARKDKKEALKPVEDRRLGKRKAALKADKSTKK---LAKKEKLAKKDPNKPK 57

Query: 294 XXXSAFFVFLEEFRKTYKLEHPNNKAVSAVGKAGGEKWKSLSRVEKAPYEAKAAKRKSEY 473
              SAFFVFLEEFRK YK EHPN KAVSAVGKAGGEKWKSLS  +KAPYEAKAAKRKS+Y
Sbjct: 58  RPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLSEADKAPYEAKAAKRKSDY 117

Query: 474 EKLMASYN 497
           EKLMA+YN
Sbjct: 118 EKLMAAYN 125


>ref|XP_002269398.1| PREDICTED: high mobility group B protein 1 isoform 1 [Vitis
           vinifera] gi|147854340|emb|CAN83423.1| hypothetical
           protein VITISV_023376 [Vitis vinifera]
          Length = 166

 Score =  130 bits (326), Expect = 5e-28
 Identities = 73/128 (57%), Positives = 77/128 (60%)
 Frame = +3

Query: 114 MKPTKGKGAVKKDTKETLKPAEDXXXXXXXXXXXXXXXXXXQXXXXXXXXXXXXXXXXXX 293
           MK TKGK A +KD KE LKP ED                                     
Sbjct: 1   MKVTKGKAAARKDKKEALKPVEDRRLGKRKAALKADKSTKK---LAKKEKLAKKDPNKPK 57

Query: 294 XXXSAFFVFLEEFRKTYKLEHPNNKAVSAVGKAGGEKWKSLSRVEKAPYEAKAAKRKSEY 473
              SAFFVFLEEFRK YK EHPN KAVSAVGKAGGEKWKSLS  +KAPYEAKAAKRKS+Y
Sbjct: 58  RPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLSEADKAPYEAKAAKRKSDY 117

Query: 474 EKLMASYN 497
           EKLMA+YN
Sbjct: 118 EKLMAAYN 125


>gb|AEV43366.1| group B HMG-box protein [Citrus sinensis]
          Length = 165

 Score =  125 bits (314), Expect = 1e-26
 Identities = 70/128 (54%), Positives = 77/128 (60%)
 Frame = +3

Query: 114 MKPTKGKGAVKKDTKETLKPAEDXXXXXXXXXXXXXXXXXXQXXXXXXXXXXXXXXXXXX 293
           MK T+GKGAVKKD  E +KP ED                  +                  
Sbjct: 1   MKVTRGKGAVKKDKNEVVKPVEDRAAGKRKAVLKASRSSNKRTKNVKSAKKDPNKPKRPP 60

Query: 294 XXXSAFFVFLEEFRKTYKLEHPNNKAVSAVGKAGGEKWKSLSRVEKAPYEAKAAKRKSEY 473
              SAFFVFLEEFRK YK EHPN KAVSAVGKAGGEKWKSL+  EKAP+EAKAAKRK +Y
Sbjct: 61  ---SAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDY 117

Query: 474 EKLMASYN 497
           EKLM +YN
Sbjct: 118 EKLMTAYN 125


>ref|XP_002279947.2| PREDICTED: high mobility group B protein 1-like [Vitis vinifera]
           gi|147815135|emb|CAN74566.1| hypothetical protein
           VITISV_023651 [Vitis vinifera]
           gi|297740214|emb|CBI30396.3| unnamed protein product
           [Vitis vinifera]
          Length = 168

 Score =  125 bits (314), Expect = 1e-26
 Identities = 69/128 (53%), Positives = 78/128 (60%)
 Frame = +3

Query: 114 MKPTKGKGAVKKDTKETLKPAEDXXXXXXXXXXXXXXXXXXQXXXXXXXXXXXXXXXXXX 293
           MK  KGKGA ++DTKE LKPAED                                     
Sbjct: 1   MKAAKGKGAARRDTKEALKPAEDRKIGKRKAAVKAEKS---SKRATTKDKKAKKDPNKPK 57

Query: 294 XXXSAFFVFLEEFRKTYKLEHPNNKAVSAVGKAGGEKWKSLSRVEKAPYEAKAAKRKSEY 473
              SAFFVFLEEFRK +K E+PN KAVSAVGKAGGE+WKSLS  EKAPYEAKAAK+K+EY
Sbjct: 58  RPPSAFFVFLEEFRKVFKKENPNVKAVSAVGKAGGERWKSLSEAEKAPYEAKAAKKKAEY 117

Query: 474 EKLMASYN 497
           EK+M +YN
Sbjct: 118 EKIMNAYN 125


>ref|XP_002316220.1| high mobility group family [Populus trichocarpa]
           gi|222865260|gb|EEF02391.1| high mobility group family
           [Populus trichocarpa]
          Length = 176

 Score =  122 bits (305), Expect = 1e-25
 Identities = 69/128 (53%), Positives = 74/128 (57%)
 Frame = +3

Query: 114 MKPTKGKGAVKKDTKETLKPAEDXXXXXXXXXXXXXXXXXXQXXXXXXXXXXXXXXXXXX 293
           MK  KGKG  + + KE L P ED                  +                  
Sbjct: 1   MKIAKGKGTARTEKKEVLLPVEDRKIGKRKAALKANESSKKRVKKEKITKKDPNKPKRPP 60

Query: 294 XXXSAFFVFLEEFRKTYKLEHPNNKAVSAVGKAGGEKWKSLSRVEKAPYEAKAAKRKSEY 473
              SAFFVFLEEFRK YK EHPN KAVSAVGKAGGEKWKSLS  EKAPYEAKAAKRKS+Y
Sbjct: 61  ---SAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLSAAEKAPYEAKAAKRKSDY 117

Query: 474 EKLMASYN 497
           EKLM +YN
Sbjct: 118 EKLMTAYN 125