BLASTX nr result
ID: Coptis21_contig00010702
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00010702 (932 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002512262.1| Pre-rRNA-processing protein TSR2, putative [... 155 1e-35 ref|XP_002319614.1| predicted protein [Populus trichocarpa] gi|2... 149 7e-34 ref|NP_001242113.1| uncharacterized protein LOC100795708 [Glycin... 145 2e-32 ref|XP_003552086.1| PREDICTED: uncharacterized protein LOC100817... 144 3e-32 ref|XP_002328370.1| predicted protein [Populus trichocarpa] gi|2... 142 9e-32 >ref|XP_002512262.1| Pre-rRNA-processing protein TSR2, putative [Ricinus communis] gi|223548223|gb|EEF49714.1| Pre-rRNA-processing protein TSR2, putative [Ricinus communis] Length = 213 Score = 155 bits (392), Expect = 1e-35 Identities = 88/191 (46%), Positives = 119/191 (62%), Gaps = 7/191 (3%) Frame = +1 Query: 127 FIEGINLILSRWTALQMAVQNEWGGRLSRQNSDNLASDILNFFTQSKGPLYIDDLEDLLF 306 F EGI LILSRW+ALQ+AV+NEWGGR SRQ +D + DI ++FTQSK PLYIDDLE++L Sbjct: 27 FQEGIFLILSRWSALQLAVENEWGGRGSRQLADQIGFDIFSWFTQSKEPLYIDDLENILD 86 Query: 307 VNTGEYLNMVVEDGSIEEVAEELMILHDELLHDTFNFIEKLXXXXXXXXXXXXXXXXXMN 486 LN ++EDGS+EEVAE+LMI+H+E L ++ IE+L Sbjct: 87 EGMIS-LNTMIEDGSVEEVAEKLMIMHEECLEGNYHTIEQLRQARPTAGVHQHIRQAANG 145 Query: 487 MDETDDESS-------GDEASDMTVDEPSSRLAPKSEIMRVDEQQLQQQPESVEVEDGWT 645 D+ DD+SS GD S+M +D P + P M+V+E Q+ +VED WT Sbjct: 146 DDDEDDDSSDDDDNSMGDNRSNMMMDAPKFQSKPNEVDMQVNEPSCQE----AQVEDEWT 201 Query: 646 VVPSRRNQGKR 678 V+ S++N+GKR Sbjct: 202 VISSKKNRGKR 212 >ref|XP_002319614.1| predicted protein [Populus trichocarpa] gi|222857990|gb|EEE95537.1| predicted protein [Populus trichocarpa] Length = 212 Score = 149 bits (377), Expect = 7e-34 Identities = 86/188 (45%), Positives = 117/188 (62%), Gaps = 4/188 (2%) Frame = +1 Query: 127 FIEGINLILSRWTALQMAVQNEWGGRLSRQNSDNLASDILNFFTQSKGPLYIDDLEDLLF 306 F EGI LILS+W+ALQ+AV+NEWGGR S ++ LASDI ++FTQSK PLYIDDLE ++ Sbjct: 29 FREGIRLILSKWSALQLAVENEWGGRGSHLLAEQLASDIFSWFTQSKEPLYIDDLESIM- 87 Query: 307 VNTGEYLNMVVEDGSIEEVAEELMILHDELLHDTFNFIEKLXXXXXXXXXXXXXXXXXMN 486 LN ++EDGS+EEVAE+LMI+H+E L ++ I+KL + Sbjct: 88 DEAMLSLNTMIEDGSVEEVAEKLMIMHEECLEGNYSSIQKLRDEGPRMGAHQHVKQAVED 147 Query: 487 MDETDDESS----GDEASDMTVDEPSSRLAPKSEIMRVDEQQLQQQPESVEVEDGWTVVP 654 D+++D S GD+ S+M VD P +L V+E ++ + EDGWTVV Sbjct: 148 DDDSEDSDSDDKMGDDGSNMMVDTPEFQLKTNLVNKPVNEPGAKE----AQSEDGWTVVS 203 Query: 655 SRRNQGKR 678 SRRN+GKR Sbjct: 204 SRRNKGKR 211 >ref|NP_001242113.1| uncharacterized protein LOC100795708 [Glycine max] gi|255641901|gb|ACU21219.1| unknown [Glycine max] Length = 201 Score = 145 bits (365), Expect = 2e-32 Identities = 87/190 (45%), Positives = 118/190 (62%), Gaps = 6/190 (3%) Frame = +1 Query: 127 FIEGINLILSRWTALQMAVQNEWGGRLSRQNSDNLASDILNFFTQSKGPLYIDDLEDLLF 306 F EGI L+LSRW+AL+ AV+NEWGGR SR +D LAS ILN+FT+SK PLYIDDLED+L Sbjct: 15 FNEGICLVLSRWSALRSAVENEWGGRESRLKADQLASGILNWFTRSKEPLYIDDLEDILD 74 Query: 307 VNTGEYLNMVVEDGSIEEVAEELMILHDELLHDTFNFIEKLXXXXXXXXXXXXXXXXXMN 486 LN+ VEDGS+EEVAE+LM++H+E L F+ E L N Sbjct: 75 QGMLS-LNVEVEDGSVEEVAEKLMVMHEEFLEGNFSSFEDL-RKANLEQATLPHVTQIAN 132 Query: 487 MDETDDESSGDEASDMTVDEPSSRL-----APKSEIMRVDEQQLQQQPE-SVEVEDGWTV 648 D+TD++ GD+ M VD+ SS++ S + V+ + P+ S E +DGW V Sbjct: 133 EDDTDED--GDDDEKMIVDDNSSKMNLDISTSDSNMNSVNRPVNEPLPKVSGEADDGWVV 190 Query: 649 VPSRRNQGKR 678 V +RRN+G++ Sbjct: 191 VSNRRNKGRK 200 >ref|XP_003552086.1| PREDICTED: uncharacterized protein LOC100817824 [Glycine max] Length = 203 Score = 144 bits (363), Expect = 3e-32 Identities = 83/190 (43%), Positives = 111/190 (58%), Gaps = 6/190 (3%) Frame = +1 Query: 127 FIEGINLILSRWTALQMAVQNEWGGRLSRQNSDNLASDILNFFTQSKGPLYIDDLEDLLF 306 F EGI L+L RW+ L AV+NEWGG SR +D LASDIL++FTQSK PLYIDDLED+L Sbjct: 15 FSEGIGLVLFRWSTLLTAVENEWGGHESRVKADQLASDILSWFTQSKEPLYIDDLEDILD 74 Query: 307 VNTGEYLNMVVEDGSIEEVAEELMILHDELLHDTFNFIEKLXXXXXXXXXXXXXXXXXMN 486 LN+ VEDGSIEEVAE+LM++H+E L D F+ E L +N Sbjct: 75 QGMLS-LNVEVEDGSIEEVAEKLMVMHEEFLEDNFSSFENL-RKANLEHAARPPVPQIVN 132 Query: 487 MDETDDESSGDEASDMTVDEPSSRLAPKSEIMRVDEQQLQQQPE------SVEVEDGWTV 648 DE D + +M VD+ SS + P++ + + + S E +DGW V Sbjct: 133 DDEDDTDEDVGNDENMIVDDNSSNMNPETSTSVANTNSVNRSVNGPLPKVSGEADDGWVV 192 Query: 649 VPSRRNQGKR 678 V +RRN+G++ Sbjct: 193 VSNRRNKGRK 202 >ref|XP_002328370.1| predicted protein [Populus trichocarpa] gi|222838085|gb|EEE76450.1| predicted protein [Populus trichocarpa] Length = 213 Score = 142 bits (359), Expect = 9e-32 Identities = 84/188 (44%), Positives = 119/188 (63%), Gaps = 4/188 (2%) Frame = +1 Query: 127 FIEGINLILSRWTALQMAVQNEWGGRLSRQNSDNLASDILNFFTQSKGPLYIDDLEDLLF 306 F EGI LILS+W+ALQ+AV+NEWGGR S ++ LASDIL++FTQSK PL+IDDLE +L Sbjct: 30 FREGICLILSKWSALQLAVENEWGGRGSGLLAEQLASDILSWFTQSKEPLFIDDLEGIL- 88 Query: 307 VNTGEYLNMVVEDGSIEEVAEELMILHDELLHDTFNFIEKLXXXXXXXXXXXXXXXXXMN 486 LN +++DGSIEEVAE+LMI+H+E L ++ I+KL + Sbjct: 89 DEAMLSLNTMIDDGSIEEVAEKLMIMHEECLEGNYSSIQKLREAAPRTRAHQHVKQAVDS 148 Query: 487 MDETD----DESSGDEASDMTVDEPSSRLAPKSEIMRVDEQQLQQQPESVEVEDGWTVVP 654 D+++ D+ GD+ S+M VD P +S++ V++ + + + EDGWTVV Sbjct: 149 DDDSEDSGNDDKMGDDESNMMVDAPEF----QSKMYPVNKPVNVPRAKEAQSEDGWTVVS 204 Query: 655 SRRNQGKR 678 SRRN+ KR Sbjct: 205 SRRNKDKR 212