BLASTX nr result

ID: Coptis21_contig00010702 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010702
         (932 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512262.1| Pre-rRNA-processing protein TSR2, putative [...   155   1e-35
ref|XP_002319614.1| predicted protein [Populus trichocarpa] gi|2...   149   7e-34
ref|NP_001242113.1| uncharacterized protein LOC100795708 [Glycin...   145   2e-32
ref|XP_003552086.1| PREDICTED: uncharacterized protein LOC100817...   144   3e-32
ref|XP_002328370.1| predicted protein [Populus trichocarpa] gi|2...   142   9e-32

>ref|XP_002512262.1| Pre-rRNA-processing protein TSR2, putative [Ricinus communis]
           gi|223548223|gb|EEF49714.1| Pre-rRNA-processing protein
           TSR2, putative [Ricinus communis]
          Length = 213

 Score =  155 bits (392), Expect = 1e-35
 Identities = 88/191 (46%), Positives = 119/191 (62%), Gaps = 7/191 (3%)
 Frame = +1

Query: 127 FIEGINLILSRWTALQMAVQNEWGGRLSRQNSDNLASDILNFFTQSKGPLYIDDLEDLLF 306
           F EGI LILSRW+ALQ+AV+NEWGGR SRQ +D +  DI ++FTQSK PLYIDDLE++L 
Sbjct: 27  FQEGIFLILSRWSALQLAVENEWGGRGSRQLADQIGFDIFSWFTQSKEPLYIDDLENILD 86

Query: 307 VNTGEYLNMVVEDGSIEEVAEELMILHDELLHDTFNFIEKLXXXXXXXXXXXXXXXXXMN 486
                 LN ++EDGS+EEVAE+LMI+H+E L   ++ IE+L                   
Sbjct: 87  EGMIS-LNTMIEDGSVEEVAEKLMIMHEECLEGNYHTIEQLRQARPTAGVHQHIRQAANG 145

Query: 487 MDETDDESS-------GDEASDMTVDEPSSRLAPKSEIMRVDEQQLQQQPESVEVEDGWT 645
            D+ DD+SS       GD  S+M +D P  +  P    M+V+E   Q+     +VED WT
Sbjct: 146 DDDEDDDSSDDDDNSMGDNRSNMMMDAPKFQSKPNEVDMQVNEPSCQE----AQVEDEWT 201

Query: 646 VVPSRRNQGKR 678
           V+ S++N+GKR
Sbjct: 202 VISSKKNRGKR 212


>ref|XP_002319614.1| predicted protein [Populus trichocarpa] gi|222857990|gb|EEE95537.1|
           predicted protein [Populus trichocarpa]
          Length = 212

 Score =  149 bits (377), Expect = 7e-34
 Identities = 86/188 (45%), Positives = 117/188 (62%), Gaps = 4/188 (2%)
 Frame = +1

Query: 127 FIEGINLILSRWTALQMAVQNEWGGRLSRQNSDNLASDILNFFTQSKGPLYIDDLEDLLF 306
           F EGI LILS+W+ALQ+AV+NEWGGR S   ++ LASDI ++FTQSK PLYIDDLE ++ 
Sbjct: 29  FREGIRLILSKWSALQLAVENEWGGRGSHLLAEQLASDIFSWFTQSKEPLYIDDLESIM- 87

Query: 307 VNTGEYLNMVVEDGSIEEVAEELMILHDELLHDTFNFIEKLXXXXXXXXXXXXXXXXXMN 486
                 LN ++EDGS+EEVAE+LMI+H+E L   ++ I+KL                  +
Sbjct: 88  DEAMLSLNTMIEDGSVEEVAEKLMIMHEECLEGNYSSIQKLRDEGPRMGAHQHVKQAVED 147

Query: 487 MDETDDESS----GDEASDMTVDEPSSRLAPKSEIMRVDEQQLQQQPESVEVEDGWTVVP 654
            D+++D  S    GD+ S+M VD P  +L        V+E   ++     + EDGWTVV 
Sbjct: 148 DDDSEDSDSDDKMGDDGSNMMVDTPEFQLKTNLVNKPVNEPGAKE----AQSEDGWTVVS 203

Query: 655 SRRNQGKR 678
           SRRN+GKR
Sbjct: 204 SRRNKGKR 211


>ref|NP_001242113.1| uncharacterized protein LOC100795708 [Glycine max]
           gi|255641901|gb|ACU21219.1| unknown [Glycine max]
          Length = 201

 Score =  145 bits (365), Expect = 2e-32
 Identities = 87/190 (45%), Positives = 118/190 (62%), Gaps = 6/190 (3%)
 Frame = +1

Query: 127 FIEGINLILSRWTALQMAVQNEWGGRLSRQNSDNLASDILNFFTQSKGPLYIDDLEDLLF 306
           F EGI L+LSRW+AL+ AV+NEWGGR SR  +D LAS ILN+FT+SK PLYIDDLED+L 
Sbjct: 15  FNEGICLVLSRWSALRSAVENEWGGRESRLKADQLASGILNWFTRSKEPLYIDDLEDILD 74

Query: 307 VNTGEYLNMVVEDGSIEEVAEELMILHDELLHDTFNFIEKLXXXXXXXXXXXXXXXXXMN 486
                 LN+ VEDGS+EEVAE+LM++H+E L   F+  E L                  N
Sbjct: 75  QGMLS-LNVEVEDGSVEEVAEKLMVMHEEFLEGNFSSFEDL-RKANLEQATLPHVTQIAN 132

Query: 487 MDETDDESSGDEASDMTVDEPSSRL-----APKSEIMRVDEQQLQQQPE-SVEVEDGWTV 648
            D+TD++  GD+   M VD+ SS++        S +  V+    +  P+ S E +DGW V
Sbjct: 133 EDDTDED--GDDDEKMIVDDNSSKMNLDISTSDSNMNSVNRPVNEPLPKVSGEADDGWVV 190

Query: 649 VPSRRNQGKR 678
           V +RRN+G++
Sbjct: 191 VSNRRNKGRK 200


>ref|XP_003552086.1| PREDICTED: uncharacterized protein LOC100817824 [Glycine max]
          Length = 203

 Score =  144 bits (363), Expect = 3e-32
 Identities = 83/190 (43%), Positives = 111/190 (58%), Gaps = 6/190 (3%)
 Frame = +1

Query: 127 FIEGINLILSRWTALQMAVQNEWGGRLSRQNSDNLASDILNFFTQSKGPLYIDDLEDLLF 306
           F EGI L+L RW+ L  AV+NEWGG  SR  +D LASDIL++FTQSK PLYIDDLED+L 
Sbjct: 15  FSEGIGLVLFRWSTLLTAVENEWGGHESRVKADQLASDILSWFTQSKEPLYIDDLEDILD 74

Query: 307 VNTGEYLNMVVEDGSIEEVAEELMILHDELLHDTFNFIEKLXXXXXXXXXXXXXXXXXMN 486
                 LN+ VEDGSIEEVAE+LM++H+E L D F+  E L                 +N
Sbjct: 75  QGMLS-LNVEVEDGSIEEVAEKLMVMHEEFLEDNFSSFENL-RKANLEHAARPPVPQIVN 132

Query: 487 MDETDDESSGDEASDMTVDEPSSRLAPKSEIMRVDEQQLQQQPE------SVEVEDGWTV 648
            DE D +       +M VD+ SS + P++     +   + +         S E +DGW V
Sbjct: 133 DDEDDTDEDVGNDENMIVDDNSSNMNPETSTSVANTNSVNRSVNGPLPKVSGEADDGWVV 192

Query: 649 VPSRRNQGKR 678
           V +RRN+G++
Sbjct: 193 VSNRRNKGRK 202


>ref|XP_002328370.1| predicted protein [Populus trichocarpa] gi|222838085|gb|EEE76450.1|
           predicted protein [Populus trichocarpa]
          Length = 213

 Score =  142 bits (359), Expect = 9e-32
 Identities = 84/188 (44%), Positives = 119/188 (63%), Gaps = 4/188 (2%)
 Frame = +1

Query: 127 FIEGINLILSRWTALQMAVQNEWGGRLSRQNSDNLASDILNFFTQSKGPLYIDDLEDLLF 306
           F EGI LILS+W+ALQ+AV+NEWGGR S   ++ LASDIL++FTQSK PL+IDDLE +L 
Sbjct: 30  FREGICLILSKWSALQLAVENEWGGRGSGLLAEQLASDILSWFTQSKEPLFIDDLEGIL- 88

Query: 307 VNTGEYLNMVVEDGSIEEVAEELMILHDELLHDTFNFIEKLXXXXXXXXXXXXXXXXXMN 486
                 LN +++DGSIEEVAE+LMI+H+E L   ++ I+KL                  +
Sbjct: 89  DEAMLSLNTMIDDGSIEEVAEKLMIMHEECLEGNYSSIQKLREAAPRTRAHQHVKQAVDS 148

Query: 487 MDETD----DESSGDEASDMTVDEPSSRLAPKSEIMRVDEQQLQQQPESVEVEDGWTVVP 654
            D+++    D+  GD+ S+M VD P      +S++  V++     + +  + EDGWTVV 
Sbjct: 149 DDDSEDSGNDDKMGDDESNMMVDAPEF----QSKMYPVNKPVNVPRAKEAQSEDGWTVVS 204

Query: 655 SRRNQGKR 678
           SRRN+ KR
Sbjct: 205 SRRNKDKR 212


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