BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010522
         (827 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAE02508.1| P0076O17.6 [Oryza sativa Japonica Group] gi|3834...    59   1e-06
emb|CCD74546.1| F-box family protein [Arabidopsis halleri subsp....    59   1e-06
ref|XP_002510330.1| ubiquitin-protein ligase, putative [Ricinus ...    57   4e-06
gb|EEC84521.1| hypothetical protein OsI_31233 [Oryza sativa Indi...    57   5e-06
ref|NP_200448.1| FBD-associated F-box protein [Arabidopsis thali...    57   7e-06

>emb|CAE02508.1| P0076O17.6 [Oryza sativa Japonica Group]
           gi|38346575|emb|CAE04222.2| OSJNBa0064D20.6 [Oryza
           sativa Japonica Group]
          Length = 291

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 26/52 (50%), Positives = 41/52 (78%)
 Frame = -1

Query: 686 RIGELPVDILYFILSLLTVKEAVRTSILSRRWRYLWKTTLASSPKLELDVVD 531
           R+GELP ++L  ILS LT ++AV+TS+LSRRWR+LW++T    P+ ++D+ +
Sbjct: 38  RLGELPDELLLSILSCLTTRQAVQTSVLSRRWRHLWRST----PRFDVDLAE 85


>emb|CCD74546.1| F-box family protein [Arabidopsis halleri subsp. halleri]
          Length = 530

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 30/69 (43%), Positives = 43/69 (62%)
 Frame = -1

Query: 713 IAFSTISMDRIGELPVDILYFILSLLTVKEAVRTSILSRRWRYLWKTTLASSPKLELDVV 534
           I+F  ++ DRI ELP  +L  ILS L  K++V+TS+LS+RW +LW         L + V+
Sbjct: 85  ISFLAMNCDRISELPDSLLTQILSYLPTKDSVKTSLLSKRWEFLW---------LRVPVL 135

Query: 533 DRRCKDFPD 507
           D +  DFPD
Sbjct: 136 DLKVSDFPD 144


>ref|XP_002510330.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551031|gb|EEF52517.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 426

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 42/141 (29%), Positives = 65/141 (46%), Gaps = 2/141 (1%)
 Frame = -1

Query: 692 MDRIGELPVDILYFILSLLTVKEAVRTSILSRRWRYLWKTTLASSPKLELDVVDRRCKDF 513
           +DRI  LP  +L  ILS L++++AVRTS LSR+WRY W    A  P L  D         
Sbjct: 15  LDRISSLPGHVLDQILSQLSIRDAVRTSALSRKWRYKW----AKIPHLVFD--------- 61

Query: 512 PDNMIGYCLAGPFYSCVPVPSRRVGFKRHDFVGFVLHVLYLDHFSVKNSSRTRIYLENDF 333
                          CV +PS+     +   V  + HVL L +  ++    +      D 
Sbjct: 62  -------------NKCVSIPSQDQTLIKDKLVNIIDHVLLLHNGPIQKFKLS----HRDL 104

Query: 332 LHFT--DQWMMEMAVSQMKDF 276
           L  +  D+W++ ++ S +K+F
Sbjct: 105 LGVSDIDRWILHLSRSSIKEF 125


>gb|EEC84521.1| hypothetical protein OsI_31233 [Oryza sativa Indica Group]
          Length = 388

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 31/76 (40%), Positives = 42/76 (55%)
 Frame = -1

Query: 689 DRIGELPVDILYFILSLLTVKEAVRTSILSRRWRYLWKTTLASSPKLELDVVDRRCKDFP 510
           D IG LP  +L+ +LS L  KE VRT +L+RRWR+LWK    S P L +   D     F 
Sbjct: 17  DHIGALPDALLHHVLSFLQSKEVVRTCVLARRWRHLWK----SVPVLRVTGADEAIHKFM 72

Query: 509 DNMIGYCLAGPFYSCV 462
           D+++      P  +CV
Sbjct: 73  DHLLLLRERSPLEACV 88


>ref|NP_200448.1| FBD-associated F-box protein [Arabidopsis thaliana]
           gi|42573692|ref|NP_974942.1| FBD-associated F-box
           protein [Arabidopsis thaliana]
           gi|75262703|sp|Q9FM94.1|FBD21_ARATH RecName:
           Full=FBD-associated F-box protein At5g56370
           gi|10177836|dbj|BAB11265.1| unnamed protein product
           [Arabidopsis thaliana] gi|46518439|gb|AAS99701.1|
           At5g56370 [Arabidopsis thaliana]
           gi|51970526|dbj|BAD43955.1| unknown protein [Arabidopsis
           thaliana] gi|332009373|gb|AED96756.1| FBD-associated
           F-box protein [Arabidopsis thaliana]
           gi|332009374|gb|AED96757.1| FBD-associated F-box protein
           [Arabidopsis thaliana]
          Length = 421

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 28/55 (50%), Positives = 36/55 (65%)
 Frame = -1

Query: 692 MDRIGELPVDILYFILSLLTVKEAVRTSILSRRWRYLWKTTLASSPKLELDVVDR 528
           MD I  LP D L  ILSLL  K+ + TS+LS+RWRYLWK      PKL+  ++D+
Sbjct: 1   MDSISLLPDDFLLRILSLLPTKDVLNTSVLSKRWRYLWKLV----PKLQYSLIDK 51