BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010479
         (351 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279169.1| PREDICTED: putative pentatricopeptide repeat...   173   2e-41
emb|CAN68525.1| hypothetical protein VITISV_018083 [Vitis vinifera]   173   2e-41
ref|XP_002520265.1| pentatricopeptide repeat-containing protein,...   171   6e-41
ref|XP_002302206.1| predicted protein [Populus trichocarpa] gi|2...   169   2e-40
ref|XP_003523413.1| PREDICTED: putative pentatricopeptide repeat...   162   2e-38

>ref|XP_002279169.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g77010, mitochondrial-like [Vitis vinifera]
          Length = 685

 Score =  173 bits (438), Expect = 2e-41
 Identities = 81/115 (70%), Positives = 97/115 (84%)
 Frame = -3

Query: 349 GLVEEGRKWFYSMKSDYNMEPAIEHYSCMIDLCARAGYLEEAMDLIDQMPFEADASMWSS 170
           GLVEEGRKWFY+MK DY++ P IEHYSCM+DL ARAG LE+AM+LI+QMP +AD SMWSS
Sbjct: 552 GLVEEGRKWFYAMKLDYHINPGIEHYSCMVDLYARAGLLEDAMNLIEQMPLKADTSMWSS 611

Query: 169 VMRGCAAHGDEILGRKVAECIIQLDPENSSAYVQLASIHASSGSWERSAEVRKSM 5
           V+RGC AHG+ ILG+KVA+ II LDPENS AYVQL+ I+A+   W RSA+VRK M
Sbjct: 612 VLRGCVAHGNNILGKKVAKRIIDLDPENSGAYVQLSGIYATFEDWGRSAQVRKLM 666


>emb|CAN68525.1| hypothetical protein VITISV_018083 [Vitis vinifera]
          Length = 1796

 Score =  173 bits (438), Expect = 2e-41
 Identities = 81/115 (70%), Positives = 97/115 (84%)
 Frame = -3

Query: 349 GLVEEGRKWFYSMKSDYNMEPAIEHYSCMIDLCARAGYLEEAMDLIDQMPFEADASMWSS 170
           GLVEEGRKWFY+MK DY++ P IEHYSCM+DL ARAG LE+AM+LI+QMP +AD SMWSS
Sbjct: 552 GLVEEGRKWFYAMKLDYHINPGIEHYSCMVDLYARAGLLEDAMNLIEQMPLKADTSMWSS 611

Query: 169 VMRGCAAHGDEILGRKVAECIIQLDPENSSAYVQLASIHASSGSWERSAEVRKSM 5
           V+RGC AHG+ ILG+KVA+ II LDPENS AYVQL+ I+A+   W RSA+VRK M
Sbjct: 612 VLRGCVAHGNNILGKKVAKRIIDLDPENSGAYVQLSGIYATFEDWGRSAQVRKLM 666



 Score =  103 bits (258), Expect = 1e-20
 Identities = 46/116 (39%), Positives = 75/116 (64%)
 Frame = -3

Query: 349  GLVEEGRKWFYSMKSDYNMEPAIEHYSCMIDLCARAGYLEEAMDLIDQMPFEADASMWSS 170
            GLV+EG   F SM+ +Y + PAIEHY+C++D+ +R G L+EAMD+++ MP E    +W S
Sbjct: 1157 GLVDEGLSIFSSMEKEYGVIPAIEHYACIVDMMSRGGKLKEAMDIVELMPHEPSGLIWGS 1216

Query: 169  VMRGCAAHGDEILGRKVAECIIQLDPENSSAYVQLASIHASSGSWERSAEVRKSMQ 2
            ++  C  +GD     +VAE +++L+P++S  Y+ LA  +   G WE    V ++M+
Sbjct: 1217 LLCACEIYGDLRFTERVAERVMELEPQSSLPYLVLAQAYEMRGRWESLVRVXRAMK 1272


>ref|XP_002520265.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540484|gb|EEF42051.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 681

 Score =  171 bits (433), Expect = 6e-41
 Identities = 81/115 (70%), Positives = 98/115 (85%)
 Frame = -3

Query: 349 GLVEEGRKWFYSMKSDYNMEPAIEHYSCMIDLCARAGYLEEAMDLIDQMPFEADASMWSS 170
           GLVEEGRKWF  MK DY+++P IEHYSCM+DL ARAG L+EA++L++ MPFEAD SMWSS
Sbjct: 552 GLVEEGRKWFNIMKYDYHIDPGIEHYSCMVDLFARAGCLKEALNLVEHMPFEADCSMWSS 611

Query: 169 VMRGCAAHGDEILGRKVAECIIQLDPENSSAYVQLASIHASSGSWERSAEVRKSM 5
           V+RGC AHGD+ LG+KVA+ IIQL+PE+SSAYVQL+ I A+SG WE SA VRK M
Sbjct: 612 VLRGCVAHGDKDLGKKVAQQIIQLNPESSSAYVQLSGIFATSGDWESSALVRKIM 666


>ref|XP_002302206.1| predicted protein [Populus trichocarpa] gi|222843932|gb|EEE81479.1|
           predicted protein [Populus trichocarpa]
          Length = 681

 Score =  169 bits (429), Expect = 2e-40
 Identities = 82/116 (70%), Positives = 98/116 (84%)
 Frame = -3

Query: 349 GLVEEGRKWFYSMKSDYNMEPAIEHYSCMIDLCARAGYLEEAMDLIDQMPFEADASMWSS 170
           GLV+EG +WF  M+ DY+++P IEHYSCM+DL ARAG LEEAM+LI +MPFEADASMWSS
Sbjct: 551 GLVKEGWRWFNIMQYDYHIDPGIEHYSCMVDLFARAGCLEEAMNLIKRMPFEADASMWSS 610

Query: 169 VMRGCAAHGDEILGRKVAECIIQLDPENSSAYVQLASIHASSGSWERSAEVRKSMQ 2
           V+RGC AHG++ LG KVA+ II+LDPENS AYVQL+SI A+SG WE SA VRK MQ
Sbjct: 611 VLRGCMAHGEKDLGEKVAQQIIELDPENSGAYVQLSSIFATSGDWESSALVRKVMQ 666


>ref|XP_003523413.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g77010, mitochondrial-like [Glycine max]
          Length = 678

 Score =  162 bits (411), Expect = 2e-38
 Identities = 75/116 (64%), Positives = 96/116 (82%)
 Frame = -3

Query: 349 GLVEEGRKWFYSMKSDYNMEPAIEHYSCMIDLCARAGYLEEAMDLIDQMPFEADASMWSS 170
           GLVEEGR  F++MK  YN+ P IEH+SCM+DL ARAGY EEAMDLI++MPF+ADA+MW S
Sbjct: 548 GLVEEGRNLFHTMKHSYNINPGIEHFSCMVDLFARAGYFEEAMDLIEEMPFQADANMWLS 607

Query: 169 VMRGCAAHGDEILGRKVAECIIQLDPENSSAYVQLASIHASSGSWERSAEVRKSMQ 2
           V+RGC AHG++ +G+  AE IIQL+PEN+ AY+QL++I ASSG WE SA VR+ M+
Sbjct: 608 VLRGCIAHGNKTIGKMAAEQIIQLEPENTGAYIQLSNILASSGDWEGSALVRELMR 663