BLASTX nr result

ID: Coptis21_contig00010478 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010478
         (1144 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEI61930.1| carotenoid cleavage dioxygenase 4 [Nicotiana taba...   300   4e-79
ref|XP_002307055.1| predicted protein [Populus trichocarpa] gi|2...   299   8e-79
gb|ABC26011.1| carotenoid cleavage dioxygenase 4a [Citrus clemen...   298   2e-78
ref|XP_002519944.1| 9-cis-epoxycarotenoid dioxygenase, putative ...   295   1e-77
ref|XP_002326037.1| predicted protein [Populus trichocarpa] gi|2...   293   5e-77

>gb|AEI61930.1| carotenoid cleavage dioxygenase 4 [Nicotiana tabacum]
          Length = 601

 Score =  300 bits (768), Expect = 4e-79
 Identities = 139/209 (66%), Positives = 165/209 (78%)
 Frame = +2

Query: 518  RSQHSKKSRRTAPLQTSTTSMLFSALDDIVNNFIDPPLRPSVDPKHVLSNNFAPVEELPP 697
            R   +K      P++ S  S++F+A DD VN FIDPPL+P VDPK++LSNNFAPV+ELPP
Sbjct: 74   RQLPTKSITTKKPVEPSFPSVIFNAFDDFVNTFIDPPLKPCVDPKYILSNNFAPVDELPP 133

Query: 698  TDCPLIEGTLPSCLDGAYIRNGPNPQYLPKGPYHLFDGDGMLHSIRISNGRATLCSRFVE 877
            T+C ++ G+LP CLDGAYIRNGPNPQYLP+GPYHLFDGDGMLHSI+IS  +ATLCSR+V+
Sbjct: 134  TECEVVVGSLPPCLDGAYIRNGPNPQYLPRGPYHLFDGDGMLHSIKISQSKATLCSRYVK 193

Query: 878  TYKYKIETETGSPVFPNVFSGFNGLPXXXXXXXXXXXRVLSGQFNPTNGIGLANTSLAFI 1057
            TYKY IE E GSPVFPNVFSGFNGL            R ++GQFNPTNGIGLANTSLA  
Sbjct: 194  TYKYTIEREAGSPVFPNVFSGFNGLTASAARGAITAARAIAGQFNPTNGIGLANTSLALF 253

Query: 1058 GDKLFALGESDLPYQIRVTSDGDIVTIRR 1144
            G KLFALGESDLPY +++  DGDI+T+ R
Sbjct: 254  GGKLFALGESDLPYAVKLAPDGDIITLGR 282


>ref|XP_002307055.1| predicted protein [Populus trichocarpa] gi|222856504|gb|EEE94051.1|
            predicted protein [Populus trichocarpa]
          Length = 507

 Score =  299 bits (766), Expect = 8e-79
 Identities = 134/189 (70%), Positives = 165/189 (87%)
 Frame = +2

Query: 578  MLFSALDDIVNNFIDPPLRPSVDPKHVLSNNFAPVEELPPTDCPLIEGTLPSCLDGAYIR 757
            M+F+ L+D++NNFIDPPLRPSVDP++VLS+NFAPV+ELPPT+C +I+G+LPSCLDGAYIR
Sbjct: 1    MMFNVLEDVINNFIDPPLRPSVDPRYVLSDNFAPVDELPPTECEVIQGSLPSCLDGAYIR 60

Query: 758  NGPNPQYLPKGPYHLFDGDGMLHSIRISNGRATLCSRFVETYKYKIETETGSPVFPNVFS 937
            NGPNPQYLP+GPYHLFDGDGMLHSIRIS G+ATLCSR+V+TYKY +E + G+P+ PNVFS
Sbjct: 61   NGPNPQYLPRGPYHLFDGDGMLHSIRISQGKATLCSRYVKTYKYTLERDAGAPLLPNVFS 120

Query: 938  GFNGLPXXXXXXXXXXXRVLSGQFNPTNGIGLANTSLAFIGDKLFALGESDLPYQIRVTS 1117
            GFNGL            R+L+GQFNP NGIGLANTSLA+ G++L+ALGESDLPY +R+TS
Sbjct: 121  GFNGLAASAARGALSAVRILAGQFNPANGIGLANTSLAYFGNRLYALGESDLPYAVRLTS 180

Query: 1118 DGDIVTIRR 1144
            +GDI T+ R
Sbjct: 181  NGDIETLGR 189


>gb|ABC26011.1| carotenoid cleavage dioxygenase 4a [Citrus clementina]
          Length = 603

 Score =  298 bits (762), Expect = 2e-78
 Identities = 140/209 (66%), Positives = 171/209 (81%)
 Frame = +2

Query: 518  RSQHSKKSRRTAPLQTSTTSMLFSALDDIVNNFIDPPLRPSVDPKHVLSNNFAPVEELPP 697
            R+Q S   ++ A  + +  +++ +A DDI+NNFIDPPL+ SVDP+HVLS+NFAPV+ELPP
Sbjct: 75   RTQSSYLPKKRA--EPTIPTIILNACDDIINNFIDPPLKYSVDPRHVLSDNFAPVDELPP 132

Query: 698  TDCPLIEGTLPSCLDGAYIRNGPNPQYLPKGPYHLFDGDGMLHSIRISNGRATLCSRFVE 877
            T+C +++G+LPSCLDGAYIRNGPNPQYLP+GPYHLFDGDGMLHSI+IS GRATLCSR+V 
Sbjct: 133  TECEVVQGSLPSCLDGAYIRNGPNPQYLPRGPYHLFDGDGMLHSIKISRGRATLCSRYVR 192

Query: 878  TYKYKIETETGSPVFPNVFSGFNGLPXXXXXXXXXXXRVLSGQFNPTNGIGLANTSLAFI 1057
            TYKY IE E GSP+ PNVFSGFNGL            R+L+GQFNP NGIGLANT+LAF 
Sbjct: 193  TYKYTIENEAGSPILPNVFSGFNGLTASAARGALSAARLLAGQFNPVNGIGLANTNLAFF 252

Query: 1058 GDKLFALGESDLPYQIRVTSDGDIVTIRR 1144
            G++L+ALGESDLPY IR+T +GDI TI R
Sbjct: 253  GNRLYALGESDLPYAIRLTPNGDIETIGR 281


>ref|XP_002519944.1| 9-cis-epoxycarotenoid dioxygenase, putative [Ricinus communis]
            gi|223540990|gb|EEF42548.1| 9-cis-epoxycarotenoid
            dioxygenase, putative [Ricinus communis]
          Length = 618

 Score =  295 bits (755), Expect = 1e-77
 Identities = 133/196 (67%), Positives = 166/196 (84%)
 Frame = +2

Query: 557  LQTSTTSMLFSALDDIVNNFIDPPLRPSVDPKHVLSNNFAPVEELPPTDCPLIEGTLPSC 736
            ++ +  +++FSA DDI+N FIDPP+RPSVDP+++LS+NFAPV+ELPPT+C ++EG+L SC
Sbjct: 105  VEPNLPTLMFSAFDDIINKFIDPPMRPSVDPRYILSDNFAPVDELPPTECEVVEGSLLSC 164

Query: 737  LDGAYIRNGPNPQYLPKGPYHLFDGDGMLHSIRISNGRATLCSRFVETYKYKIETETGSP 916
            LDGAYIRNGPNPQYLP+GPYHLFDGDGMLHSIRIS G+ATLCSR+V+TYKY +E + G+P
Sbjct: 165  LDGAYIRNGPNPQYLPRGPYHLFDGDGMLHSIRISQGKATLCSRYVKTYKYTMERDAGAP 224

Query: 917  VFPNVFSGFNGLPXXXXXXXXXXXRVLSGQFNPTNGIGLANTSLAFIGDKLFALGESDLP 1096
            + PNVFSGFNGL            R+LSGQFNP NGIGLANTSLAF G++L+ALGESDLP
Sbjct: 225  LLPNVFSGFNGLAASATRGALSAARILSGQFNPVNGIGLANTSLAFFGNRLYALGESDLP 284

Query: 1097 YQIRVTSDGDIVTIRR 1144
            Y +R+T +GDI T+ R
Sbjct: 285  YTVRLTLNGDIETLGR 300


>ref|XP_002326037.1| predicted protein [Populus trichocarpa] gi|222862912|gb|EEF00419.1|
            predicted protein [Populus trichocarpa]
          Length = 589

 Score =  293 bits (750), Expect = 5e-77
 Identities = 132/196 (67%), Positives = 166/196 (84%)
 Frame = +2

Query: 557  LQTSTTSMLFSALDDIVNNFIDPPLRPSVDPKHVLSNNFAPVEELPPTDCPLIEGTLPSC 736
            ++ +  +M+F+ L+ ++NNFIDPPLR SVDP++VLS+NFAPV+ELPPT+C +I G+LPSC
Sbjct: 76   VEPNQPTMMFNVLEGVINNFIDPPLRQSVDPRYVLSDNFAPVDELPPTECEVIHGSLPSC 135

Query: 737  LDGAYIRNGPNPQYLPKGPYHLFDGDGMLHSIRISNGRATLCSRFVETYKYKIETETGSP 916
            LDGAYIRNGPNPQYLP+GPYHLFDGDGMLHSIRIS G+ATLCSR+V+TYKY +E + G+P
Sbjct: 136  LDGAYIRNGPNPQYLPRGPYHLFDGDGMLHSIRISQGKATLCSRYVKTYKYTMERDAGAP 195

Query: 917  VFPNVFSGFNGLPXXXXXXXXXXXRVLSGQFNPTNGIGLANTSLAFIGDKLFALGESDLP 1096
            + PNVFSGFNGL            R+L+GQFNP NGIGLANTSLA+ G++L+ALGESDLP
Sbjct: 196  LLPNVFSGFNGLAASAARGALSAARILAGQFNPANGIGLANTSLAYFGNRLYALGESDLP 255

Query: 1097 YQIRVTSDGDIVTIRR 1144
            Y +R+TS+GDI T+ R
Sbjct: 256  YAVRLTSNGDIETLGR 271


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