BLASTX nr result

ID: Coptis21_contig00010438 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010438
         (809 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002333629.1| predicted protein [Populus trichocarpa] gi|2...    72   1e-10
ref|XP_002320002.1| predicted protein [Populus trichocarpa] gi|2...    70   7e-10
ref|XP_002331379.1| nbs-lrr resistance protein [Populus trichoca...    64   5e-08
ref|XP_002304055.1| cc-nbs-lrr resistance protein [Populus trich...    62   2e-07
ref|XP_002336207.1| nbs-lrr resistance protein [Populus trichoca...    62   2e-07

>ref|XP_002333629.1| predicted protein [Populus trichocarpa] gi|222837837|gb|EEE76202.1|
           predicted protein [Populus trichocarpa]
          Length = 634

 Score = 72.4 bits (176), Expect = 1e-10
 Identities = 59/245 (24%), Positives = 95/245 (38%), Gaps = 2/245 (0%)
 Frame = -2

Query: 757 ESVLDGLEPHTNLAELRVEDYGGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 578
           E  L+GL+PH ++  L ++ YGG                                     
Sbjct: 19  EDALEGLQPHPDIRSLTIKGYGGEYFPSWILQLNNLMKLRLKDCSNCRQLPT-------- 70

Query: 577 XXXXXXXXXXXXXXLGRLQNLEHLELWGLGSVKRIGCEFYGLGSTGGEGSVQSVVVFPKL 398
                         LG L  L+ L++ G+ +VK IG EFY +  +       + ++FP L
Sbjct: 71  --------------LGSLPRLKILKMSGMHNVKCIGNEFYSISGS-------ATILFPAL 109

Query: 397 HTLRIHDMNECEEWHLPFRRGVEIFPKLGRLTVENLMXXXXXXXXXXXXXXXXXXXXKFR 218
             L +  M+  EEW +P   G ++FP L +L+++                          
Sbjct: 110 KELTLEYMDGLEEWMIPGGEGDQVFPFLEKLSIQQCGKLRQLPTLGCLPRLKILKMSGIN 169

Query: 217 CLELFGINSDDDSVTPVAVFPVLKKLTLFHMPEWDE--IRRDEEGFIMPCLQVLEIYYCP 44
            ++  G      S +P  +FP LK+LTL +M   +E  +   E   + PCL+ L I  C 
Sbjct: 170 NVKCIGNEFYSISGSPTILFPALKELTLEYMDGLEEWMVPGGEVVAVFPCLEELSIQQCG 229

Query: 43  KLKVV 29
           KLK +
Sbjct: 230 KLKSI 234


>ref|XP_002320002.1| predicted protein [Populus trichocarpa] gi|222860775|gb|EEE98317.1|
           predicted protein [Populus trichocarpa]
          Length = 855

 Score = 69.7 bits (169), Expect = 7e-10
 Identities = 72/267 (26%), Positives = 107/267 (40%), Gaps = 9/267 (3%)
 Frame = -2

Query: 799 LVFSAAREEKRKRV--ESVLDGLEPHTNLAELRVEDYGGNXXXXXXXXXXXXXXXXXXXX 626
           LVF  + +E    V  E VL+GL+PH ++  L +  YGG                     
Sbjct: 219 LVFKWSDDEVNSSVRNEDVLEGLQPHPDIRSLTIGGYGGENFSSWILQLNNLTVLRLNGC 278

Query: 625 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGRLQNLEHLELWGLGSVKRIGCEFYGLGS 446
                                         LG L  L+ L +  + +VK IG EFY  GS
Sbjct: 279 SKLRQLPT----------------------LGCLPRLKILYMNRMPNVKCIGKEFYSSGS 316

Query: 445 TGGEGSVQSVVVFPKLHTLRIHDMNECEEWHLPFRRGVEIFPKLGRLTVE---NLMXXXX 275
               GS  + V+FP L  L +  M+  EEW +P   G  +FP L +L++E    L     
Sbjct: 317 ----GS--ATVLFPALKELTLRYMDGLEEWMVPGGEGDRVFPCLEKLSIEMCGKLRQLPT 370

Query: 274 XXXXXXXXXXXXXXXXKFRCL--ELFGINSDDDSVTPVAVFPVLKKLTLFHMPEWDE--I 107
                             +C+  E +  +S  ++V    +FP LK+LTL +M   +E  +
Sbjct: 371 LGCLPRLKILYMSRMPNVKCIGKEFYSSSSGSEAV----LFPALKELTLRYMDGLEEWMV 426

Query: 106 RRDEEGFIMPCLQVLEIYYCPKLKVVP 26
              E   + PCL+ L I  C KL+ +P
Sbjct: 427 PGGEGDRVFPCLEKLSIEMCGKLRQLP 453



 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 55/177 (31%), Positives = 82/177 (46%), Gaps = 7/177 (3%)
 Frame = -2

Query: 535 LGRLQNLEHLELWGLGSVKRIGCEFYGLGSTGGEGSVQSVVVFPKLHTLRIHDMNECEEW 356
           LG L  L+ L +  + +VK IG EFY   S+G E      V+FP L  L +  M+  EEW
Sbjct: 371 LGCLPRLKILYMSRMPNVKCIGKEFYS-SSSGSEA-----VLFPALKELTLRYMDGLEEW 424

Query: 355 HLPFRRGVEIFPKLGRLTVE---NLMXXXXXXXXXXXXXXXXXXXXKFRCL--ELFGINS 191
            +P   G  +FP L +L++E    L                       +C+  E +  +S
Sbjct: 425 MVPGGEGDRVFPCLEKLSIEMCGKLRQLPTLGCLPRLKILDMIGMPNVKCIGKEFYSSSS 484

Query: 190 DDDSVTPVAVFPVLKKLTLFHMPEWDE--IRRDEEGFIMPCLQVLEIYYCPKLKVVP 26
              +V    +FP LK L+LF M   +E  +   E   + PCL+ L I +C KL+ +P
Sbjct: 485 GSAAV----LFPALKGLSLFSMGGLEEWMVPGGEGDQVFPCLEKLSIEWCGKLESIP 537


>ref|XP_002331379.1| nbs-lrr resistance protein [Populus trichocarpa]
            gi|222874417|gb|EEF11548.1| nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 821

 Score = 63.5 bits (153), Expect = 5e-08
 Identities = 68/263 (25%), Positives = 98/263 (37%), Gaps = 5/263 (1%)
 Frame = -2

Query: 799  LVFSAAREEKRKRV--ESVLDGLEPHTNLAELRVEDYGGNXXXXXXXXXXXXXXXXXXXX 626
            LVF  + +E    V  E VL+GL+PH +L  L +E YGG                     
Sbjct: 513  LVFEWSYDEGNNSVNSEDVLEGLQPHPDLRSLTIEGYGGGYFSSWILQLNNLTVLRLNGC 572

Query: 625  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGRLQNLEHLELWGLGSVKRIGCEFYGLGS 446
                                          LG L  L+ L++ G+ +VK IG EFY   S
Sbjct: 573  SKLRQLPT----------------------LGCLPRLKILKMSGMPNVKCIGKEFYS-SS 609

Query: 445  TGGEGSVQSVVVFPKLHTLRIHDMNECEEWHLPFRRGVEIFPKLGRLTVENLMXXXXXXX 266
             G    +     FP L  L +  M+  EEW +P   G  +FP L  L +E          
Sbjct: 610  IGSAAEL-----FPALEELTLRGMDGLEEWMVPGGEGDLVFPCLEELCIEECRQLRQLPT 664

Query: 265  XXXXXXXXXXXXXKFRCLELFGINSDDDSVTPVA-VFPVLKKLTLFHMPEWDE--IRRDE 95
                             ++  G      S+   A +FP L++LTL  M   +E  +   E
Sbjct: 665  LGCLPRLKILKMSGMPNVKCIGKEFYSSSIGSAAELFPALEELTLRGMDGLEEWMVPGGE 724

Query: 94   EGFIMPCLQVLEIYYCPKLKVVP 26
               + P L+ L I+ C KL+ +P
Sbjct: 725  VVAVFPRLEKLSIWQCGKLESIP 747


>ref|XP_002304055.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
            gi|222841487|gb|EEE79034.1| cc-nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 1091

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 46/153 (30%), Positives = 66/153 (43%)
 Frame = -2

Query: 757  ESVLDGLEPHTNLAELRVEDYGGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 578
            E VL+GL+PH ++  L +E YGG                                     
Sbjct: 723  EYVLEGLQPHVDIRSLTIEGYGGEYFPSWMSTLPLNNLTVLRMKDCSKCRQLPA------ 776

Query: 577  XXXXXXXXXXXXXXLGRLQNLEHLELWGLGSVKRIGCEFYGLGSTGGEGSVQSVVVFPKL 398
                          LG L  L+ LE+ G+ +VK IG EFY   S+GG     + V+FP L
Sbjct: 777  --------------LGCLPRLKILEMSGMRNVKCIGNEFYS--SSGG-----AAVLFPAL 815

Query: 397  HTLRIHDMNECEEWHLPFRRGVEIFPKLGRLTV 299
              L + DM+  EEW +P R G ++FP L +L++
Sbjct: 816  KELTLEDMDGLEEWIVPGREGDQVFPCLEKLSI 848


>ref|XP_002336207.1| nbs-lrr resistance protein [Populus trichocarpa]
           gi|222832610|gb|EEE71087.1| nbs-lrr resistance protein
           [Populus trichocarpa]
          Length = 981

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 46/153 (30%), Positives = 66/153 (43%)
 Frame = -2

Query: 757 ESVLDGLEPHTNLAELRVEDYGGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 578
           E VL+GL+PH ++  L +E YGG                                     
Sbjct: 525 EYVLEGLQPHVDIRSLTIEGYGGEYFPSWMSTLPLNNLTVLRMKDCSKCRQLPA------ 578

Query: 577 XXXXXXXXXXXXXXLGRLQNLEHLELWGLGSVKRIGCEFYGLGSTGGEGSVQSVVVFPKL 398
                         LG L  L+ LE+ G+ +VK IG EFY   S+GG     + V+FP L
Sbjct: 579 --------------LGCLPRLKILEMSGMRNVKCIGNEFYS--SSGG-----AAVLFPAL 617

Query: 397 HTLRIHDMNECEEWHLPFRRGVEIFPKLGRLTV 299
             L + DM+  EEW +P R G ++FP L +L++
Sbjct: 618 KELTLEDMDGLEEWIVPGREGDQVFPCLEKLSI 650


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