BLASTX nr result

ID: Coptis21_contig00010430 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010430
         (966 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303426.1| predicted protein [Populus trichocarpa] gi|2...   176   5e-47
ref|XP_002527652.1| conserved hypothetical protein [Ricinus comm...   172   2e-46
ref|XP_002865943.1| hypothetical protein ARALYDRAFT_495363 [Arab...   169   3e-46
ref|XP_004138504.1| PREDICTED: uncharacterized protein LOC101222...   167   7e-45
ref|NP_200110.1| uncharacterized protein [Arabidopsis thaliana] ...   164   1e-44

>ref|XP_002303426.1| predicted protein [Populus trichocarpa] gi|222840858|gb|EEE78405.1|
           predicted protein [Populus trichocarpa]
          Length = 207

 Score =  176 bits (445), Expect(2) = 5e-47
 Identities = 94/165 (56%), Positives = 114/165 (69%)
 Frame = -3

Query: 964 RSFLLKSIIQDSNLNQQHHQIALNLSSQNNVPYKLIRNLWTVSSPSXXXXXXXXXXXXXX 785
           RSFLL S  +D ++ ++   +ALNLSSQNN+ YK  R++W  S PS              
Sbjct: 20  RSFLL-SASKDGDVPRELQDLALNLSSQNNLHYKSFRSIWIRSPPSTRP----------- 67

Query: 784 XXXXXXXXRPKLIHLFNDSEFVLTSPKPREKSAELKARLRKLTELAERREYNELVKDITP 605
                    P LI LF+ S F+L+SPKPREKS ELKARLRKL E+AER+ Y ELVKDITP
Sbjct: 68  ---------PDLIRLFSGSNFILSSPKPREKSEELKARLRKLEEMAERKAYAELVKDITP 118

Query: 604 RKPTSDPFSSYTDQLRFGMHVIVTMFTGYLIGYAAFRALFNHSPA 470
           RK T +PFSSY DQ+ FG+HV++ MFTGYL+GYAAFRALF HSPA
Sbjct: 119 RKNTDEPFSSYKDQMGFGLHVVLIMFTGYLVGYAAFRALFGHSPA 163



 Score = 39.3 bits (90), Expect(2) = 5e-47
 Identities = 18/24 (75%), Positives = 21/24 (87%)
 Frame = -1

Query: 378 MNAAGGILGLILSMLVETLLFIIK 307
           M+AAGGILGL+  MLVET LFII+
Sbjct: 164 MSAAGGILGLVFGMLVETFLFIIR 187


>ref|XP_002527652.1| conserved hypothetical protein [Ricinus communis]
           gi|223532957|gb|EEF34723.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 213

 Score =  172 bits (436), Expect(2) = 2e-46
 Identities = 97/165 (58%), Positives = 111/165 (67%)
 Frame = -3

Query: 964 RSFLLKSIIQDSNLNQQHHQIALNLSSQNNVPYKLIRNLWTVSSPSXXXXXXXXXXXXXX 785
           RSFLL S  ++ +L+QQ   +A  L SQ+NV YK +R++W  S  S              
Sbjct: 22  RSFLL-SASKEPHLSQQLRDLASFLVSQHNVQYKSLRSIWIASPHST------------- 67

Query: 784 XXXXXXXXRPKLIHLFNDSEFVLTSPKPREKSAELKARLRKLTELAERREYNELVKDITP 605
                   RP LI LF+ SE VLTSPKPREKS ELKARLRKL ELAER  Y ELVKDITP
Sbjct: 68  --------RPDLIRLFSGSELVLTSPKPREKSEELKARLRKLEELAERNAYQELVKDITP 119

Query: 604 RKPTSDPFSSYTDQLRFGMHVIVTMFTGYLIGYAAFRALFNHSPA 470
           RK   +PFSSY DQL FG+HV +TMFTGYL+GYAAFRALF HSPA
Sbjct: 120 RKDEIEPFSSYKDQLGFGLHVALTMFTGYLVGYAAFRALFGHSPA 164



 Score = 40.4 bits (93), Expect(2) = 2e-46
 Identities = 19/24 (79%), Positives = 22/24 (91%)
 Frame = -1

Query: 378 MNAAGGILGLILSMLVETLLFIIK 307
           M+AAGGILGL+  MLVETLLFII+
Sbjct: 165 MSAAGGILGLVCGMLVETLLFIIR 188


>ref|XP_002865943.1| hypothetical protein ARALYDRAFT_495363 [Arabidopsis lyrata subsp.
           lyrata] gi|297311778|gb|EFH42202.1| hypothetical protein
           ARALYDRAFT_495363 [Arabidopsis lyrata subsp. lyrata]
          Length = 215

 Score =  169 bits (429), Expect(2) = 3e-46
 Identities = 92/165 (55%), Positives = 113/165 (68%)
 Frame = -3

Query: 964 RSFLLKSIIQDSNLNQQHHQIALNLSSQNNVPYKLIRNLWTVSSPSXXXXXXXXXXXXXX 785
           RSFL  +   D +L+++  +IA +L S+N VPYKL+R LWT S PS              
Sbjct: 21  RSFLALAS-GDRHLSEELREIATDLRSKNTVPYKLLRALWTGSDPST------------- 66

Query: 784 XXXXXXXXRPKLIHLFNDSEFVLTSPKPREKSAELKARLRKLTELAERREYNELVKDITP 605
                   RP L+ LF+ S+FV TSPKPREKS ELK RL KL E+AER+EY ELVKDITP
Sbjct: 67  --------RPDLLGLFSGSDFVFTSPKPREKSEELKLRLLKLREIAERKEYAELVKDITP 118

Query: 604 RKPTSDPFSSYTDQLRFGMHVIVTMFTGYLIGYAAFRALFNHSPA 470
           +K   +PFSSY DQL FG+HV +TMFTGYL+GYA+FRALFN +PA
Sbjct: 119 KKQVEEPFSSYKDQLGFGLHVGLTMFTGYLVGYASFRALFNRNPA 163



 Score = 42.7 bits (99), Expect(2) = 3e-46
 Identities = 20/24 (83%), Positives = 24/24 (100%)
 Frame = -1

Query: 378 MNAAGGILGLILSMLVETLLFIIK 307
           ++AAGGILGL+L+MLVETLLFIIK
Sbjct: 164 LSAAGGILGLVLAMLVETLLFIIK 187


>ref|XP_004138504.1| PREDICTED: uncharacterized protein LOC101222938 [Cucumis sativus]
           gi|449522720|ref|XP_004168374.1| PREDICTED:
           uncharacterized protein LOC101228437 [Cucumis sativus]
          Length = 206

 Score =  167 bits (422), Expect(2) = 7e-45
 Identities = 88/164 (53%), Positives = 107/164 (65%)
 Frame = -3

Query: 964 RSFLLKSIIQDSNLNQQHHQIALNLSSQNNVPYKLIRNLWTVSSPSXXXXXXXXXXXXXX 785
           RSFL  + I DS L+ +  QIA +L SQ N+PYKL+R +W  +  S              
Sbjct: 20  RSFLTSASI-DSQLSDELRQIASDLVSQRNIPYKLLRAIWFATESST------------- 65

Query: 784 XXXXXXXXRPKLIHLFNDSEFVLTSPKPREKSAELKARLRKLTELAERREYNELVKDITP 605
                   RP L+ L   SEFV TSPKPREKS ELKARL+KL ++AER+ Y ELVKDI P
Sbjct: 66  --------RPDLLRLLAGSEFVFTSPKPREKSEELKARLKKLADVAERKAYQELVKDIAP 117

Query: 604 RKPTSDPFSSYTDQLRFGMHVIVTMFTGYLIGYAAFRALFNHSP 473
           +KP  +PFSSY DQL FG+HV++ MFTGYL+GYA FRALF H P
Sbjct: 118 KKPIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDP 161



 Score = 40.8 bits (94), Expect(2) = 7e-45
 Identities = 19/24 (79%), Positives = 22/24 (91%)
 Frame = -1

Query: 378 MNAAGGILGLILSMLVETLLFIIK 307
           M+AAGGILGL+  MLVETLLFII+
Sbjct: 163 MSAAGGILGLVFGMLVETLLFIIR 186


>ref|NP_200110.1| uncharacterized protein [Arabidopsis thaliana]
           gi|8809587|dbj|BAA97138.1| unnamed protein product
           [Arabidopsis thaliana] gi|46518365|gb|AAS99664.1|
           At5g52980 [Arabidopsis thaliana]
           gi|48310362|gb|AAT41806.1| At5g52980 [Arabidopsis
           thaliana] gi|110743071|dbj|BAE99428.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332008903|gb|AED96286.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 222

 Score =  164 bits (415), Expect(2) = 1e-44
 Identities = 90/165 (54%), Positives = 109/165 (66%)
 Frame = -3

Query: 964 RSFLLKSIIQDSNLNQQHHQIALNLSSQNNVPYKLIRNLWTVSSPSXXXXXXXXXXXXXX 785
           RSFL  +   D  L+ +   IA +L S+N +PYKL+R +WT S PS              
Sbjct: 21  RSFLALAS-GDRRLSDELRGIASDLRSKNTIPYKLLRAIWTGSDPST------------- 66

Query: 784 XXXXXXXXRPKLIHLFNDSEFVLTSPKPREKSAELKARLRKLTELAERREYNELVKDITP 605
                   RP L+ LF+ S FV TSPKPREKS ELK RL KL E+AER+EY ELVKDITP
Sbjct: 67  --------RPDLLGLFSGSNFVFTSPKPREKSEELKLRLVKLREIAERKEYAELVKDITP 118

Query: 604 RKPTSDPFSSYTDQLRFGMHVIVTMFTGYLIGYAAFRALFNHSPA 470
           +K   +PFSSY DQL FG+HV +TMFTGYL+GYA+FRALFN +PA
Sbjct: 119 KKQVEEPFSSYKDQLGFGLHVGLTMFTGYLVGYASFRALFNRNPA 163



 Score = 42.7 bits (99), Expect(2) = 1e-44
 Identities = 20/24 (83%), Positives = 24/24 (100%)
 Frame = -1

Query: 378 MNAAGGILGLILSMLVETLLFIIK 307
           ++AAGGILGL+L+MLVETLLFIIK
Sbjct: 164 LSAAGGILGLVLAMLVETLLFIIK 187