BLASTX nr result

ID: Coptis21_contig00010427 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010427
         (472 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ84979.1| predicted protein [Hordeum vulgare subsp. vulgare]     60   2e-07
gb|ADK47521.1| RDG2A [Hordeum vulgare subsp. vulgare]                  60   2e-07
gb|EEC72357.1| hypothetical protein OsI_05605 [Oryza sativa Indi...    57   1e-06
ref|XP_002444677.1| hypothetical protein SORBIDRAFT_07g025890 [S...    57   2e-06
gb|EEE56188.1| hypothetical protein OsJ_05141 [Oryza sativa Japo...    56   3e-06

>dbj|BAJ84979.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 663

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 49/154 (31%), Positives = 76/154 (49%), Gaps = 15/154 (9%)
 Frame = -2

Query: 462 VKSVNEAKQAELQKKKNISDLVLNFGDEIYPRDIRHVSSEEEIRRMEGVLENLEPHKESL 283
           +KS   AK+A L +K+N+S+L+ ++G +I          ++E   +E VL+ LEPH  ++
Sbjct: 138 IKSGENAKEANLSQKQNLSELLFSWGQKI----------DDEPTDVEEVLQGLEPH-SNI 186

Query: 282 ERLEIENYVGSTLPTTWMMSNITF-----LHLYNCPNLKVEPHYLFPPRLETLVL--LDD 124
           ++LEI  Y G  + + WM     F     L ++ CP  K  P   F   LE LVL  +D+
Sbjct: 187 QKLEIRGYHGLEI-SQWMRKPQMFDCLRELEMFGCPKCKSIPVIWFSVSLEILVLQSMDN 245

Query: 123 VGVLSK--------SLMSLTHNNNLKTLKIYSLP 46
           +  L          S+  L    NLK L +  LP
Sbjct: 246 LTTLCSNLGVEAGGSITPLQLFPNLKKLCLIKLP 279


>gb|ADK47521.1| RDG2A [Hordeum vulgare subsp. vulgare]
          Length = 1232

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 49/154 (31%), Positives = 76/154 (49%), Gaps = 15/154 (9%)
 Frame = -2

Query: 462  VKSVNEAKQAELQKKKNISDLVLNFGDEIYPRDIRHVSSEEEIRRMEGVLENLEPHKESL 283
            +KS   AK+A L +K+N+S+L+ ++G +I          ++E   +E VL+ LEPH  ++
Sbjct: 707  IKSGENAKEANLSQKQNLSELLFSWGQKI----------DDEPTDVEEVLQGLEPH-SNI 755

Query: 282  ERLEIENYVGSTLPTTWMMSNITF-----LHLYNCPNLKVEPHYLFPPRLETLVL--LDD 124
            ++LEI  Y G  + + WM     F     L ++ CP  K  P   F   LE LVL  +D+
Sbjct: 756  QKLEIRGYHGLEI-SQWMRKPQMFDCLRELEMFGCPKCKSIPVIWFSVSLEILVLQSMDN 814

Query: 123  VGVLSK--------SLMSLTHNNNLKTLKIYSLP 46
            +  L          S+  L    NLK L +  LP
Sbjct: 815  LTTLCSNLGVEAGGSITPLQLFPNLKKLCLIKLP 848


>gb|EEC72357.1| hypothetical protein OsI_05605 [Oryza sativa Indica Group]
          Length = 2679

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 47/156 (30%), Positives = 71/156 (45%), Gaps = 3/156 (1%)
 Frame = -2

Query: 471  LRHVKSVNEAKQAELQKKKNISDLVLNFGDEIYPRDIRHVSSEEEIRRMEGVLENLEPHK 292
            L +VKS  EAK A L  K+++  L   +       D+   S     +  + VLE LEPH 
Sbjct: 2462 LENVKSEEEAKSARLIDKEHLEALSFTW------NDLSMTSEPTAEKTTDDVLEGLEPH- 2514

Query: 291  ESLERLEIENYVGSTLPTTWMMSNITF---LHLYNCPNLKVEPHYLFPPRLETLVLLDDV 121
             +L+ L++  Y G+T P TW+ S +T    LHLYNC   +V                   
Sbjct: 2515 HNLKHLQLTRYSGATSP-TWLASTVTSLQGLHLYNCREWRV------------------- 2554

Query: 120  GVLSKSLMSLTHNNNLKTLKIYSLPHSSLPQGLNQL 13
                +SL  L     LK +++++L   S+P  L +L
Sbjct: 2555 ---VRSLEKLPLLRKLKLVRMWNLMEVSIPSYLEEL 2587


>ref|XP_002444677.1| hypothetical protein SORBIDRAFT_07g025890 [Sorghum bicolor]
            gi|241941027|gb|EES14172.1| hypothetical protein
            SORBIDRAFT_07g025890 [Sorghum bicolor]
          Length = 1191

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 51/158 (32%), Positives = 80/158 (50%), Gaps = 16/158 (10%)
 Frame = -2

Query: 471  LRHVKSVNEAKQAELQKKKNISDLVLNFG-DEIYPRDIRHVSSEEEIRRMEGVLENLEPH 295
            L +++ V    +  L +KKN+++LVLN+G + IY  +  H   E      E VLE+L PH
Sbjct: 704  LFNLRKVKSGSKVNLHEKKNLTELVLNWGPNRIYIPNPLH--DEVINNNEEEVLESLVPH 761

Query: 294  KESLERLEIENYVGSTLPTTWMMSNITF-----LHLYNCPNLKVEPHYLFPPRLETLVL- 133
             E L+ L ++ Y G ++ + WM +   F     L++ NCP  K  P       LE L L 
Sbjct: 762  AE-LKTLGLQEYPGLSI-SQWMRNPQMFQCLRELYISNCPRCKDLPLVWLSSSLEKLCLR 819

Query: 132  -LDDVGVLSKSL-MSLTHNNN-------LKTLKIYSLP 46
             +D +  L K++ M  T +N+       LKT+ +  LP
Sbjct: 820  RMDSLSALCKNIDMEATRHNSSLAIFPKLKTMWLVGLP 857


>gb|EEE56188.1| hypothetical protein OsJ_05141 [Oryza sativa Japonica Group]
          Length = 1249

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 47/156 (30%), Positives = 73/156 (46%), Gaps = 3/156 (1%)
 Frame = -2

Query: 471 LRHVKSVNEAKQAELQKKKNISDLVLNFGDEIYPRDIRHVSSEEEIRRMEGVLENLEPHK 292
           L +VK+  EA+ A L  K+++ +L L++ D +        S   E      VLE LEPH 
Sbjct: 283 LENVKTKKEARSARLMDKEHLKELSLSWNDNMS-------SGPTEENTRYDVLEGLEPHG 335

Query: 291 ESLERLEIENYVGSTLPTTWMMSNIT---FLHLYNCPNLKVEPHYLFPPRLETLVLLDDV 121
            +L+ L++  Y G+T PT W  S +T    LHL NC   ++  +      LE L LL   
Sbjct: 336 -NLKHLQLTGYSGATSPT-WFASKVTSLQVLHLENCTEWRIVQY------LEMLPLL--- 384

Query: 120 GVLSKSLMSLTHNNNLKTLKIYSLPHSSLPQGLNQL 13
                          LK +++++L   S+P  L +L
Sbjct: 385 -------------RKLKLIRMWNLVEVSIPSYLEEL 407


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