BLASTX nr result

ID: Coptis21_contig00010426 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010426
         (1464 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632308.1| PREDICTED: tRNA (guanine-N(7)-)-methyltransf...   556   e-156
ref|XP_002524762.1| WD-repeat protein, putative [Ricinus communi...   511   e-142
ref|XP_002307594.1| predicted protein [Populus trichocarpa] gi|2...   492   e-137
ref|XP_003520572.1| PREDICTED: tRNA (guanine-N(7)-)-methyltransf...   491   e-136
ref|XP_003553467.1| PREDICTED: tRNA (guanine-N(7)-)-methyltransf...   486   e-135

>ref|XP_003632308.1| PREDICTED: tRNA (guanine-N(7)-)-methyltransferase subunit WDR4-like
            [Vitis vinifera] gi|296085216|emb|CBI28711.3| unnamed
            protein product [Vitis vinifera]
          Length = 433

 Score =  556 bits (1432), Expect = e-156
 Identities = 285/434 (65%), Positives = 345/434 (79%), Gaps = 7/434 (1%)
 Frame = -2

Query: 1463 ESMMMEEGESNK--EVAPALIAIHPLEKSVVVAIGSELRVFDLQEDCASSLVDDSGRPLH 1290
            E   +EEG++++  EVAPALI++HP  K +VV+IGS+LRVFDLQ  C+ +LVDDS  PLH
Sbjct: 2    EEPAIEEGDNHRDVEVAPALISVHPDHKFIVVSIGSDLRVFDLQGGCSVTLVDDSSGPLH 61

Query: 1289 MDSIRAIRFGADGRLFVSAGDDKLVKIWTTNPWHCIHTVLSEKRVSALAISPDNLFVSFA 1110
             DSIRAIRFGA+G+LFVSAGDDKLVKIW  N WHCI TV SEKRVSA+AIS D LFV FA
Sbjct: 62   KDSIRAIRFGAEGKLFVSAGDDKLVKIWNANSWHCISTVCSEKRVSAVAISKDGLFVCFA 121

Query: 1109 DKFGVVWVVSTKVDDERK----DEASPIFAHYCSIITSLEFSPDGRFIVSADRDFKIRVT 942
            DKFGVVW ++    DE +     +A+P+ AHYCSIITSLEFS DGRFI+SADRDFKIRV+
Sbjct: 122  DKFGVVWALNLDGFDENQVLVDKKAAPVLAHYCSIITSLEFSLDGRFIISADRDFKIRVS 181

Query: 941  VFPKRPLSGAHEIQSFCLGHTEFVTCLSFVCTQEYPQGFLLSGSGDSTVRLWDITSGFLL 762
            VFPK+PL GAHEIQSFCLGHTEFV+CL+FVC  +YP+GFL+SGSGDSTVRLWDITSG LL
Sbjct: 182  VFPKKPLDGAHEIQSFCLGHTEFVSCLAFVCAPDYPEGFLVSGSGDSTVRLWDITSGSLL 241

Query: 761  DTCEVGMEAGLLESDDKEETLCPAITDICASPDGSLIAVAIQSLHGVVLLSCNLSGRTLS 582
            DTCEVG +AG LES+ + E    A+ D+C +PDG+L+A AIQSL G++LL+CN+S ++LS
Sbjct: 242  DTCEVGSQAGFLESNGRGEEHYSAVIDLCTTPDGTLVAAAIQSLQGIMLLNCNISAKSLS 301

Query: 581  ITKVVSM-GGTFIPTSLAMSSLAERLWIVTGASNLPALDSPSFARVSVISGLKKHGSDSS 405
            I KVVS+ GG+FIPTSL  +S AE LW+VTG S L  LDS S ARV VISG +    DS 
Sbjct: 302  IAKVVSITGGSFIPTSLGTASCAEFLWMVTGVSTLHGLDSHSLARVRVISGFRISSPDSV 361

Query: 404  DDKPVVLDDNEIPGGSKLLEKLQGSVSISKGXXXXXXXXXAVKIAMRNLLIKRQYSVEKR 225
            + +P +L+D+EIPGG KLLEKLQGSVSI            AVK+AM NLLIK+QYS +KR
Sbjct: 362  EHEPTMLEDDEIPGGEKLLEKLQGSVSIEN--KVFSAAAEAVKMAMCNLLIKKQYSADKR 419

Query: 224  ELRKKSRNDRKLKQ 183
            E RK++RND+K+KQ
Sbjct: 420  EFRKRTRNDKKIKQ 433


>ref|XP_002524762.1| WD-repeat protein, putative [Ricinus communis]
            gi|223535946|gb|EEF37605.1| WD-repeat protein, putative
            [Ricinus communis]
          Length = 435

 Score =  511 bits (1315), Expect = e-142
 Identities = 272/435 (62%), Positives = 325/435 (74%), Gaps = 8/435 (1%)
 Frame = -2

Query: 1463 ESMMMEEGESNKE--VAPALIAIHPLEKSVVVAIGSELRVFDLQEDCASSLVDD-SGRPL 1293
            E   +E  E+NKE  VAPALI++HP + SV VA+GS+LRVFDLQ  C   LVD+ S  PL
Sbjct: 4    EDTQIEAAENNKEIEVAPALISVHPTQNSVAVAVGSDLRVFDLQGGCGVCLVDNNSSEPL 63

Query: 1292 HMDSIRAIRFGADGRLFVSAGDDKLVKIWTTNPWHCIHTVLSEKRVSALAISPDNLFVSF 1113
            H DSIRAIR+ A+G+LFVSAGDDKLV IW+T+ W C+ +V SEKRVSA+AIS D L+V F
Sbjct: 64   HKDSIRAIRYSANGKLFVSAGDDKLVNIWSTDSWGCVSSVCSEKRVSAVAISNDGLYVCF 123

Query: 1112 ADKFGVVWVVSTKVDDERKD----EASPIFAHYCSIITSLEFSPDGRFIVSADRDFKIRV 945
            ADKFGVVWVV     +  +     +ASP+ AHYCSIITSLEFSPDGRFIVSADRDFKIRV
Sbjct: 124  ADKFGVVWVVDLHELEGNQSLVNKKASPLLAHYCSIITSLEFSPDGRFIVSADRDFKIRV 183

Query: 944  TVFPKRPLSGAHEIQSFCLGHTEFVTCLSFVCTQEYPQGFLLSGSGDSTVRLWDITSGFL 765
            TVFPK+ L GAHEIQSFCLGHTEFV+CL+F+   +YPQG L+SGSGDSTVRLWDIT+G L
Sbjct: 184  TVFPKKTLDGAHEIQSFCLGHTEFVSCLAFIWAADYPQGLLVSGSGDSTVRLWDITAGRL 243

Query: 764  LDTCEVGMEAGLLESDDKEETLCPAITDICASPDGSLIAVAIQSLHGVVLLSCNLSGRTL 585
            LDTCEVG + G L+S   +E  C A+TD+C  P+ +L+AVAIQSL G++LLSC+L  ++L
Sbjct: 244  LDTCEVGAKTGCLDSSKNDED-CSAVTDLCTIPNDNLVAVAIQSLQGIMLLSCDLDSQSL 302

Query: 584  SITKVV-SMGGTFIPTSLAMSSLAERLWIVTGASNLPALDSPSFARVSVISGLKKHGSDS 408
             + KVV  MG  FIPTSL  SS AE +W+VTG S L   D  S ARV V+SG  K   DS
Sbjct: 303  HVIKVVFVMGENFIPTSLGSSSSAELIWMVTGVSKLQGSDHNSLARVRVLSGFTKSIPDS 362

Query: 407  SDDKPVVLDDNEIPGGSKLLEKLQGSVSISKGXXXXXXXXXAVKIAMRNLLIKRQYSVEK 228
            +D +  VL DNE+PG  KLLEKLQGSV I +          AVK AM NLLIK+QY+ EK
Sbjct: 363  TDGELHVLGDNEVPGAEKLLEKLQGSVFIDE--KVFQAAAEAVKTAMCNLLIKKQYTTEK 420

Query: 227  RELRKKSRNDRKLKQ 183
            RE RK+ RNDRK+KQ
Sbjct: 421  REFRKRGRNDRKVKQ 435


>ref|XP_002307594.1| predicted protein [Populus trichocarpa] gi|222857043|gb|EEE94590.1|
            predicted protein [Populus trichocarpa]
          Length = 440

 Score =  492 bits (1267), Expect = e-137
 Identities = 263/441 (59%), Positives = 321/441 (72%), Gaps = 14/441 (3%)
 Frame = -2

Query: 1463 ESMMMEEGESNK--EVAPALIAIHPLEKSVVVAIGSELRVFDLQEDCASSLVDDSGRPLH 1290
            E    E GE+N+  EVAPALI++HP + SV VA+GS+LR FDL+ +C  +LVD++G   H
Sbjct: 2    EDTQPEGGENNRDVEVAPALISVHPTQDSVAVAVGSDLRFFDLRGNCGVTLVDETGEAFH 61

Query: 1289 MDSIRAIRFGADGRLFVSAGDDKLVKIWTTNPWHCIHTVLSEKRVSALAISPDNLFVSFA 1110
             DSIRAIR+GA G+LFVSAGDDKLVK+W+T+ W CI +V SEKRVSA+AIS D L+V FA
Sbjct: 62   KDSIRAIRYGAKGKLFVSAGDDKLVKVWSTDSWRCIASVCSEKRVSAVAISNDGLYVCFA 121

Query: 1109 DKFGVVWVVSTKVDDERKD----EASPIFAHYCSIITSLEFSPDGRFIVSADRDFKIRVT 942
            DKFGVVWVV  +  D  +     +A+P+ AHYCSIITSLEFSPDG FIV+ADRDFKIRVT
Sbjct: 122  DKFGVVWVVDLRGLDGNETLVNKKAAPLLAHYCSIITSLEFSPDGWFIVTADRDFKIRVT 181

Query: 941  VFPKRPLSGAHEIQSFCLGHTEFVTCLSFVCTQEYPQGFLLSGSGDSTVRLWDITSGFLL 762
            VFPK+PL GAHEIQSFCLGHTEFV+CL+F+ T +YPQGFL+SGSGDSTVRLWDI SG LL
Sbjct: 182  VFPKKPLDGAHEIQSFCLGHTEFVSCLAFLVTVDYPQGFLVSGSGDSTVRLWDINSGTLL 241

Query: 761  DTCEVGMEAG--LLESDDKEETLCPAITDICASPDGSLIAVAIQ---SLHG--VVLLSCN 603
            DTCEVG +     L   D  E  C  +TD+C  P  + +AVAIQ   S H   ++L+SC+
Sbjct: 242  DTCEVGSKVSHFFLNYYDGSEVSCSTVTDLCTIPGSNFVAVAIQRHVSKHSACILLVSCD 301

Query: 602  LSGRTLSITKVVS-MGGTFIPTSLAMSSLAERLWIVTGASNLPALDSPSFARVSVISGLK 426
            LS +T    KVVS MG +FIPTSL  SS AE LW +TG S L   D  S A V V+SG K
Sbjct: 302  LSSQTFGAVKVVSNMGDSFIPTSLGCSSSAELLWTITGVSKLHGSDHNSLACVRVLSGFK 361

Query: 425  KHGSDSSDDKPVVLDDNEIPGGSKLLEKLQGSVSISKGXXXXXXXXXAVKIAMRNLLIKR 246
            K   D++  +  +LDDNE+PG  KLLEKLQGSV++ +          AVK +M NLLIK+
Sbjct: 362  KTIPDAAGPELTLLDDNEVPGAEKLLEKLQGSVTVEE--EVFLAAAEAVKTSMCNLLIKK 419

Query: 245  QYSVEKRELRKKSRNDRKLKQ 183
            QY+ EKRE RK+ RND+K KQ
Sbjct: 420  QYTTEKREFRKRGRNDKKTKQ 440


>ref|XP_003520572.1| PREDICTED: tRNA (guanine-N(7)-)-methyltransferase subunit WDR4-like
            [Glycine max]
          Length = 419

 Score =  491 bits (1263), Expect = e-136
 Identities = 262/426 (61%), Positives = 311/426 (73%), Gaps = 3/426 (0%)
 Frame = -2

Query: 1454 MMEEGESNKEVAPALIAIHPLEKSVVVAIGSELRVFDLQEDCASSLVDDSGR--PLHMDS 1281
            M  E +++ +VAPALIA+HP + SV VA+G  LRVFDL    A+SL DDS    P H D+
Sbjct: 1    MESESKNDTQVAPALIAVHPDQSSVAVAVGPHLRVFDLLSGSAASLTDDSDGAVPFHKDN 60

Query: 1280 IRAIRFGADGRLFVSAGDDKLVKIWTTNPWHCIHTVLSEKRVSALAISPDNLFVSFADKF 1101
            IRAIRFGA G+LFVSAGDDK +K+W+T  W CI TV SEKRV+A+AIS D  FV FADKF
Sbjct: 61   IRAIRFGAKGKLFVSAGDDKTLKVWSTQSWRCITTVSSEKRVTAVAISDDGTFVCFADKF 120

Query: 1100 GVVWVVSTKVDDERKDEASPIFAHYCSIITSLEFSPDGRFIVSADRDFKIRVTVFPKRPL 921
            GVVWVV          + +P+ +HYCSIITSLEFSPDGR+I+SADRDFKIRVT FPK+PL
Sbjct: 121  GVVWVVDLDPPLHDDKKPAPLLSHYCSIITSLEFSPDGRYILSADRDFKIRVTNFPKKPL 180

Query: 920  SGAHEIQSFCLGHTEFVTCLSFVCTQEYPQGFLLSGSGDSTVRLWDITSGFLLDTCEVGM 741
            +GA +IQSFCLGHTEFV+CL+F+  QE PQGFLLSGSGDSTVRLW+I SG LLDTCEV +
Sbjct: 181  NGAQQIQSFCLGHTEFVSCLAFIQAQECPQGFLLSGSGDSTVRLWNIDSGALLDTCEVAI 240

Query: 740  EAGLLESDDKEETLCPAITDICASPDGSLIAVAIQSLHGVVLLSCNLSGRTLSITKVVSM 561
            +AGLLES+ K E    A+TD+C   DG L+AVAIQSL G+VLLSCN+S +TLS+ KVVS+
Sbjct: 241  KAGLLESNGKAEERGHAVTDLCTVLDGLLVAVAIQSLQGIVLLSCNVSAQTLSVAKVVSV 300

Query: 560  GG-TFIPTSLAMSSLAERLWIVTGASNLPALDSPSFARVSVISGLKKHGSDSSDDKPVVL 384
             G  F+PT L  S    +LW+VTG S LP  + PS A V VIS +        + +PVVL
Sbjct: 301  AGEAFVPTCLGSSPSIGKLWMVTGVSGLPGFNYPSLACVRVISSI------DVEKEPVVL 354

Query: 383  DDNEIPGGSKLLEKLQGSVSISKGXXXXXXXXXAVKIAMRNLLIKRQYSVEKRELRKKSR 204
             D+ IPGG KLLE LQGS S+            AVK AM NLLIK+QY  E RE RKKSR
Sbjct: 355  GDDNIPGGEKLLETLQGSASVDDN--AFLAAAEAVKTAMCNLLIKKQYPSENREYRKKSR 412

Query: 203  NDRKLK 186
            NDRKLK
Sbjct: 413  NDRKLK 418


>ref|XP_003553467.1| PREDICTED: tRNA (guanine-N(7)-)-methyltransferase subunit WDR4-like
            [Glycine max]
          Length = 417

 Score =  486 bits (1251), Expect = e-135
 Identities = 264/426 (61%), Positives = 312/426 (73%), Gaps = 3/426 (0%)
 Frame = -2

Query: 1454 MMEEGESNKEVAPALIAIHPLEKSVVVAIGSELRVFDLQEDCASSLVDDSG-RPLHMDSI 1278
            M  E +++ EVAPALIA+HP + SV VA+G  LRVFDL    A+SL DDS   PLH ++I
Sbjct: 1    MESESKNDTEVAPALIAVHPDQSSVAVAVGPHLRVFDLLSGSAASLTDDSDCAPLHKNNI 60

Query: 1277 RAIRFGADGRLFVSAGDDKLVKIWTTNPWHCIHTVLSEKRVSALAISPDNLFVSFADKFG 1098
            RAIRFGA G+LFVSAGDDK VK+W+T  W CI TV SEKRV+A+AIS D  FV FADKFG
Sbjct: 61   RAIRFGAKGKLFVSAGDDKTVKVWSTQSWRCITTVSSEKRVTAVAISNDGTFVCFADKFG 120

Query: 1097 VVWVVSTKVDDERKDEA-SPIFAHYCSIITSLEFSPDGRFIVSADRDFKIRVTVFPKRPL 921
            VVWVV   VD    D+  +P+ +HYCSIITSLEFSPDGRFI+SADRDFKIRVT FP++PL
Sbjct: 121  VVWVVD--VDPPLHDKKPAPLLSHYCSIITSLEFSPDGRFILSADRDFKIRVTNFPQKPL 178

Query: 920  SGAHEIQSFCLGHTEFVTCLSFVCTQEYPQGFLLSGSGDSTVRLWDITSGFLLDTCEVGM 741
            +GAH+IQSFCLGHTEFV+CL+F+  QE PQG LLSGSGDSTVRLW+I SG LLDTCEV +
Sbjct: 179  NGAHQIQSFCLGHTEFVSCLAFIQAQECPQGLLLSGSGDSTVRLWNIDSGALLDTCEVAI 238

Query: 740  EAGLLESDDKEETLCPAITDICASPDGSLIAVAIQSLHGVVLLSCNLSGRTLSITKVVSM 561
            +AGLLES+ K E    A+ D+C   DG ++AVAIQSL G+VLLSCN+  +TLS  KVVS+
Sbjct: 239  KAGLLESNGKAEEHGHAVIDLCTVLDGLIVAVAIQSLQGIVLLSCNVCAQTLSFAKVVSV 298

Query: 560  GG-TFIPTSLAMSSLAERLWIVTGASNLPALDSPSFARVSVISGLKKHGSDSSDDKPVVL 384
             G  F+PT L  S    +LW+VTG S LP  +  S ARV VISG+        + +PVV 
Sbjct: 299  AGEAFVPTCLGSSPSIRKLWMVTGVSGLPGCNYLSLARVRVISGI------DVEQEPVVP 352

Query: 383  DDNEIPGGSKLLEKLQGSVSISKGXXXXXXXXXAVKIAMRNLLIKRQYSVEKRELRKKSR 204
             D+ IPGG KLLE LQGS S+            AVK AM NLLIK+QY  E RE RKKSR
Sbjct: 353  GDDNIPGGEKLLETLQGSASVDDS--AFLATAEAVKTAMCNLLIKKQYPSENREYRKKSR 410

Query: 203  NDRKLK 186
            NDRKLK
Sbjct: 411  NDRKLK 416


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