BLASTX nr result

ID: Coptis21_contig00010411 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010411
         (277 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACH87168.1| senescence-related protein [Camellia sinensis]          81   1e-13
ref|XP_002305512.1| predicted protein [Populus trichocarpa] gi|2...    75   4e-12
emb|CBI37885.3| unnamed protein product [Vitis vinifera]               74   9e-12
ref|XP_002278045.1| PREDICTED: uncharacterized protein LOC100267...    74   9e-12
ref|XP_002529647.1| conserved hypothetical protein [Ricinus comm...    74   1e-11

>gb|ACH87168.1| senescence-related protein [Camellia sinensis]
          Length = 448

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 45/89 (50%), Positives = 62/89 (69%), Gaps = 5/89 (5%)
 Frame = -1

Query: 253 MTSHQTKNSTPLYPQVLQSNPD--SAIGTTKTSSNLYPSLDMNDLGGNLFPDNDN---DT 89
           M+S   KNS  LYPQV QSNP+  S+  ++ +SS +YPS+DM DL  NLFPDND+   ++
Sbjct: 1   MSSQNPKNS--LYPQVDQSNPEAISSSSSSPSSSTIYPSIDMKDLAENLFPDNDSQNPNS 58

Query: 88  ISTTVPVEQLLLTIPASIVHLIDKQHSVE 2
            S     E++L+ +P +IVHLIDK+ SVE
Sbjct: 59  QSQLESSEEILIRVPGTIVHLIDKEQSVE 87


>ref|XP_002305512.1| predicted protein [Populus trichocarpa] gi|222848476|gb|EEE86023.1|
           predicted protein [Populus trichocarpa]
          Length = 446

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 38/79 (48%), Positives = 53/79 (67%), Gaps = 6/79 (7%)
 Frame = -1

Query: 220 LYPQVLQSNPDSAIGTTKTSSNLYPSLDMNDLGGNLFPDNDNDTI------STTVPVEQL 59
           LYPQV+ SNP++   T+ T S+LYP+  M DL  NLFP++DN+        S + P E++
Sbjct: 9   LYPQVILSNPEAISATSSTPSSLYPTTGMKDLAENLFPEDDNNNDLGSPLGSNSEPHEEV 68

Query: 58  LLTIPASIVHLIDKQHSVE 2
           L+ I  SIVHLI++ HSVE
Sbjct: 69  LIKISGSIVHLIERDHSVE 87


>emb|CBI37885.3| unnamed protein product [Vitis vinifera]
          Length = 381

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 41/92 (44%), Positives = 62/92 (67%), Gaps = 8/92 (8%)
 Frame = -1

Query: 253 MTSHQTKNSTPLYPQVLQSNPDSAIG-----TTKTSSNLYPSLDMNDLGGNLFPDNDNDT 89
           M+S+  +N   LYP+V  SNP++        T+ +SS+LYPSL++ +L  NLFPD +ND 
Sbjct: 1   MSSNPYRNPNSLYPEVDLSNPEATSPLISNPTSASSSSLYPSLEVKELAENLFPD-ENDA 59

Query: 88  I---STTVPVEQLLLTIPASIVHLIDKQHSVE 2
           +    ++ P E++L+ +  +IVHLIDKQHSVE
Sbjct: 60  VLQNPSSQPFEEVLVRVSGAIVHLIDKQHSVE 91


>ref|XP_002278045.1| PREDICTED: uncharacterized protein LOC100267615 isoform 1 [Vitis
           vinifera]
          Length = 450

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 41/92 (44%), Positives = 62/92 (67%), Gaps = 8/92 (8%)
 Frame = -1

Query: 253 MTSHQTKNSTPLYPQVLQSNPDSAIG-----TTKTSSNLYPSLDMNDLGGNLFPDNDNDT 89
           M+S+  +N   LYP+V  SNP++        T+ +SS+LYPSL++ +L  NLFPD +ND 
Sbjct: 1   MSSNPYRNPNSLYPEVDLSNPEATSPLISNPTSASSSSLYPSLEVKELAENLFPD-ENDA 59

Query: 88  I---STTVPVEQLLLTIPASIVHLIDKQHSVE 2
           +    ++ P E++L+ +  +IVHLIDKQHSVE
Sbjct: 60  VLQNPSSQPFEEVLVRVSGAIVHLIDKQHSVE 91


>ref|XP_002529647.1| conserved hypothetical protein [Ricinus communis]
           gi|223530873|gb|EEF32734.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 442

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 40/91 (43%), Positives = 58/91 (63%), Gaps = 7/91 (7%)
 Frame = -1

Query: 253 MTSHQTKNSTPLYPQVLQSNPDSAIGTTKTSSNLYPSLDMNDLGGNLFPDND----NDTI 86
           M S        LYP+++Q+NP+S   ++ +SSNLYP++DM DL  NLFPD D    N  I
Sbjct: 1   MASQNPNPKQSLYPEIIQTNPESNPKSSSSSSNLYPTIDMKDLVENLFPDLDEQQKNHNI 60

Query: 85  STTVP---VEQLLLTIPASIVHLIDKQHSVE 2
             + P   +E+ L+ IP +I++LIDK +SVE
Sbjct: 61  LPSAPPQALEEELIKIPGAILNLIDKNYSVE 91