BLASTX nr result

ID: Coptis21_contig00010410 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010410
         (286 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACH87168.1| senescence-related protein [Camellia sinensis]          75   6e-12
ref|XP_002305512.1| predicted protein [Populus trichocarpa] gi|2...    71   8e-11
emb|CBI37885.3| unnamed protein product [Vitis vinifera]               69   3e-10
ref|XP_002278045.1| PREDICTED: uncharacterized protein LOC100267...    69   3e-10
ref|NP_179374.1| senescence/dehydration related protein [Arabido...    68   7e-10

>gb|ACH87168.1| senescence-related protein [Camellia sinensis]
          Length = 448

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 43/90 (47%), Positives = 59/90 (65%), Gaps = 3/90 (3%)
 Frame = +1

Query: 25  MTSPQTKSSTPLYPQVLQSNPDSAIGTTKTXXXXXNLYPSLDMNDLGGNLFPDNDN---D 195
           M+S   K+S  LYPQV QSNP+ AI ++ +      +YPS+DM DL  NLFPDND+   +
Sbjct: 1   MSSQNPKNS--LYPQVDQSNPE-AISSSSSSPSSSTIYPSIDMKDLAENLFPDNDSQNPN 57

Query: 196 IISTTVPVEQLLLTIPASIVHLIDKQHSVE 285
             S     E++L+ +P +IVHLIDK+ SVE
Sbjct: 58  SQSQLESSEEILIRVPGTIVHLIDKEQSVE 87


>ref|XP_002305512.1| predicted protein [Populus trichocarpa] gi|222848476|gb|EEE86023.1|
           predicted protein [Populus trichocarpa]
          Length = 446

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 41/93 (44%), Positives = 59/93 (63%), Gaps = 6/93 (6%)
 Frame = +1

Query: 25  MTSPQTKSSTPLYPQVLQSNPDSAIGTTKTXXXXXNLYPSLDMNDLGGNLFPDNDND--- 195
           M+SP+  S   LYPQV+ SNP++   T+ T     +LYP+  M DL  NLFP++DN+   
Sbjct: 1   MSSPKRNS---LYPQVILSNPEAISATSSTPS---SLYPTTGMKDLAENLFPEDDNNNDL 54

Query: 196 ---IISTTVPVEQLLLTIPASIVHLIDKQHSVE 285
              + S + P E++L+ I  SIVHLI++ HSVE
Sbjct: 55  GSPLGSNSEPHEEVLIKISGSIVHLIERDHSVE 87


>emb|CBI37885.3| unnamed protein product [Vitis vinifera]
          Length = 381

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 37/91 (40%), Positives = 59/91 (64%), Gaps = 4/91 (4%)
 Frame = +1

Query: 25  MTSPQTKSSTPLYPQVLQSNPD--SAIGTTKTXXXXXNLYPSLDMNDLGGNLFPDNDNDI 198
           M+S   ++   LYP+V  SNP+  S + +  T     +LYPSL++ +L  NLFPD ++ +
Sbjct: 1   MSSNPYRNPNSLYPEVDLSNPEATSPLISNPTSASSSSLYPSLEVKELAENLFPDENDAV 60

Query: 199 IS--TTVPVEQLLLTIPASIVHLIDKQHSVE 285
           +   ++ P E++L+ +  +IVHLIDKQHSVE
Sbjct: 61  LQNPSSQPFEEVLVRVSGAIVHLIDKQHSVE 91


>ref|XP_002278045.1| PREDICTED: uncharacterized protein LOC100267615 isoform 1 [Vitis
           vinifera]
          Length = 450

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 37/91 (40%), Positives = 59/91 (64%), Gaps = 4/91 (4%)
 Frame = +1

Query: 25  MTSPQTKSSTPLYPQVLQSNPD--SAIGTTKTXXXXXNLYPSLDMNDLGGNLFPDNDNDI 198
           M+S   ++   LYP+V  SNP+  S + +  T     +LYPSL++ +L  NLFPD ++ +
Sbjct: 1   MSSNPYRNPNSLYPEVDLSNPEATSPLISNPTSASSSSLYPSLEVKELAENLFPDENDAV 60

Query: 199 IS--TTVPVEQLLLTIPASIVHLIDKQHSVE 285
           +   ++ P E++L+ +  +IVHLIDKQHSVE
Sbjct: 61  LQNPSSQPFEEVLVRVSGAIVHLIDKQHSVE 91


>ref|NP_179374.1| senescence/dehydration related protein [Arabidopsis thaliana]
           gi|13272393|gb|AAK17135.1|AF325067_1 putative
           senescence-related protein [Arabidopsis thaliana]
           gi|16226784|gb|AAL16261.1|AF428331_1 probable senescence
           related protein [Arabidopsis thaliana]
           gi|19698945|gb|AAL91208.1| putative senescence-related
           protein [Arabidopsis thaliana]
           gi|24899805|gb|AAN65117.1| putative senescence-related
           protein [Arabidopsis thaliana]
           gi|330251599|gb|AEC06693.1| senescence/dehydration
           related protein [Arabidopsis thaliana]
          Length = 452

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 40/91 (43%), Positives = 55/91 (60%), Gaps = 4/91 (4%)
 Frame = +1

Query: 25  MTSPQTKSSTPLYPQVLQSNPDSAIGTTKTXXXXXNLYPSLDMNDLGGNLFPDN-DNDII 201
           M S   K ++ LYP V  SNP++ I  + +     NLYPSLDMNDL  NLFP+  +   I
Sbjct: 1   MESSGDKQTSSLYPTVDTSNPEAPINPSSSSSTN-NLYPSLDMNDLARNLFPEQPETSSI 59

Query: 202 STTVP---VEQLLLTIPASIVHLIDKQHSVE 285
             + P    E+++L I  +I+HLIDK +SVE
Sbjct: 60  PVSAPPAATEEVILKISGAILHLIDKSYSVE 90


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