BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010409
         (232 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274427.1| PREDICTED: pentatricopeptide repeat-containi...   122   3e-26
ref|XP_002468209.1| hypothetical protein SORBIDRAFT_01g041740 [S...   110   1e-22
ref|XP_003552441.1| PREDICTED: putative pentatricopeptide repeat...   110   2e-22
emb|CBI36340.3| unnamed protein product [Vitis vinifera]              110   2e-22
ref|XP_002265258.1| PREDICTED: pentatricopeptide repeat-containi...   110   2e-22

>ref|XP_002274427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
            chloroplastic [Vitis vinifera]
            gi|302143764|emb|CBI22625.3| unnamed protein product
            [Vitis vinifera]
          Length = 880

 Score =  122 bits (306), Expect = 3e-26
 Identities = 53/71 (74%), Positives = 64/71 (90%)
 Frame = -3

Query: 227  SYHSEKLAIAFGLLNTPSMAPIRIIKNLRICVDCHTFTKLVSQLVDREIVVRDGNRFHSF 48
            ++HSEKLA+AFGL++TP  APIRIIKN+RIC DCH F   V++LVDREI+VRDGNRFHSF
Sbjct: 810  AHHSEKLAVAFGLISTPPKAPIRIIKNIRICRDCHDFIMNVTRLVDREIIVRDGNRFHSF 869

Query: 47   KKGDCSCQGYW 15
            KKG+CSC+GYW
Sbjct: 870  KKGECSCRGYW 880


>ref|XP_002468209.1| hypothetical protein SORBIDRAFT_01g041740 [Sorghum bicolor]
           gi|241922063|gb|EER95207.1| hypothetical protein
           SORBIDRAFT_01g041740 [Sorghum bicolor]
          Length = 635

 Score =  110 bits (275), Expect = 1e-22
 Identities = 46/70 (65%), Positives = 57/70 (81%)
 Frame = -3

Query: 224 YHSEKLAIAFGLLNTPSMAPIRIIKNLRICVDCHTFTKLVSQLVDREIVVRDGNRFHSFK 45
           YHSE+LA+AFG++ TP  API++ KNLRIC DCHT  KL+S++V REI+VRD NRFH FK
Sbjct: 566 YHSERLAVAFGIIATPKGAPIKVFKNLRICGDCHTTIKLISKIVQREIIVRDSNRFHHFK 625

Query: 44  KGDCSCQGYW 15
            G CSC+ YW
Sbjct: 626 NGSCSCRDYW 635


>ref|XP_003552441.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g23330-like [Glycine max]
          Length = 1011

 Score =  110 bits (274), Expect = 2e-22
 Identities = 48/71 (67%), Positives = 56/71 (78%)
 Frame = -3

Query: 227  SYHSEKLAIAFGLLNTPSMAPIRIIKNLRICVDCHTFTKLVSQLVDREIVVRDGNRFHSF 48
            S+HSEKLA+ FG++NT +  PIRIIKNLRIC DCH F K  SQL+DREI+VRD +RFH F
Sbjct: 941  SHHSEKLAVVFGIINTANRTPIRIIKNLRICTDCHNFIKYASQLLDREIIVRDIHRFHHF 1000

Query: 47   KKGDCSCQGYW 15
            K G CSC  YW
Sbjct: 1001 KHGSCSCGDYW 1011


>emb|CBI36340.3| unnamed protein product [Vitis vinifera]
          Length = 630

 Score =  110 bits (274), Expect = 2e-22
 Identities = 48/71 (67%), Positives = 58/71 (81%)
 Frame = -3

Query: 227 SYHSEKLAIAFGLLNTPSMAPIRIIKNLRICVDCHTFTKLVSQLVDREIVVRDGNRFHSF 48
           SYHSEKLAIA+GL+ TPS APIR+IKNLR+CVDCH+  KL+S++ +R I+VRD NRFH F
Sbjct: 560 SYHSEKLAIAYGLMKTPSGAPIRVIKNLRMCVDCHSAVKLISKVTNRMIIVRDANRFHCF 619

Query: 47  KKGDCSCQGYW 15
             G CSC  YW
Sbjct: 620 GDGGCSCADYW 630


>ref|XP_002265258.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Vitis vinifera]
          Length = 703

 Score =  110 bits (274), Expect = 2e-22
 Identities = 48/71 (67%), Positives = 58/71 (81%)
 Frame = -3

Query: 227 SYHSEKLAIAFGLLNTPSMAPIRIIKNLRICVDCHTFTKLVSQLVDREIVVRDGNRFHSF 48
           SYHSEKLAIA+GL+ TPS APIR+IKNLR+CVDCH+  KL+S++ +R I+VRD NRFH F
Sbjct: 633 SYHSEKLAIAYGLMKTPSGAPIRVIKNLRMCVDCHSAVKLISKVTNRMIIVRDANRFHCF 692

Query: 47  KKGDCSCQGYW 15
             G CSC  YW
Sbjct: 693 GDGGCSCADYW 703