BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010401
         (765 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632354.1| PREDICTED: CUGBP Elav-like family member 5 i...   147   3e-33
ref|XP_002270390.1| PREDICTED: CUGBP Elav-like family member 5 i...   147   3e-33
emb|CAN71673.1| hypothetical protein VITISV_044358 [Vitis vinifera]   147   3e-33
ref|XP_002320377.1| predicted protein [Populus trichocarpa] gi|2...   143   3e-32
ref|XP_002520700.1| RNA binding protein, putative [Ricinus commu...   138   1e-30

>ref|XP_003632354.1| PREDICTED: CUGBP Elav-like family member 5 isoform 2 [Vitis
           vinifera]
          Length = 447

 Score =  147 bits (370), Expect = 3e-33
 Identities = 79/149 (53%), Positives = 98/149 (65%), Gaps = 4/149 (2%)
 Frame = +3

Query: 321 YGLRQYMCTQMQNRPGSHKLIPPVSHRSAFRVISPDLSPGIGPRNSVTVPFGSCLGPAHP 500
           YGL QY    MQ++   H +IP V+  SA R I+PDL+  + PRN   VP  S +G A+P
Sbjct: 246 YGLMQYRMPPMQSQAAFHNMIPQVNQGSAMRAIAPDLARAVAPRN-YAVPSASYMGSAYP 304

Query: 501 PEPGLWYPVAYSGRIISHRPISR--GFTPPEIMSSRGTFQTSV--NSGTQVEGPPGANLF 668
             PGL YP+AY G I+SH+P+S   G  PP +M+S     +    +SG QVEGPPGANLF
Sbjct: 305 ALPGLQYPMAYHGGIMSHQPLSGSPGSRPPAMMTSNSPTNSGAGASSGGQVEGPPGANLF 364

Query: 669 VSNIPQEFGGQELADAFQAFGRVLSTKVF 755
           + +IPQEFG  ELA AFQ FGRVLS KVF
Sbjct: 365 IYHIPQEFGDHELAHAFQQFGRVLSAKVF 393


>ref|XP_002270390.1| PREDICTED: CUGBP Elav-like family member 5 isoform 1 [Vitis
           vinifera] gi|296086641|emb|CBI32276.3| unnamed protein
           product [Vitis vinifera]
          Length = 437

 Score =  147 bits (370), Expect = 3e-33
 Identities = 79/149 (53%), Positives = 98/149 (65%), Gaps = 4/149 (2%)
 Frame = +3

Query: 321 YGLRQYMCTQMQNRPGSHKLIPPVSHRSAFRVISPDLSPGIGPRNSVTVPFGSCLGPAHP 500
           YGL QY    MQ++   H +IP V+  SA R I+PDL+  + PRN   VP  S +G A+P
Sbjct: 236 YGLMQYRMPPMQSQAAFHNMIPQVNQGSAMRAIAPDLARAVAPRN-YAVPSASYMGSAYP 294

Query: 501 PEPGLWYPVAYSGRIISHRPISR--GFTPPEIMSSRGTFQTSV--NSGTQVEGPPGANLF 668
             PGL YP+AY G I+SH+P+S   G  PP +M+S     +    +SG QVEGPPGANLF
Sbjct: 295 ALPGLQYPMAYHGGIMSHQPLSGSPGSRPPAMMTSNSPTNSGAGASSGGQVEGPPGANLF 354

Query: 669 VSNIPQEFGGQELADAFQAFGRVLSTKVF 755
           + +IPQEFG  ELA AFQ FGRVLS KVF
Sbjct: 355 IYHIPQEFGDHELAHAFQQFGRVLSAKVF 383


>emb|CAN71673.1| hypothetical protein VITISV_044358 [Vitis vinifera]
          Length = 450

 Score =  147 bits (370), Expect = 3e-33
 Identities = 79/149 (53%), Positives = 98/149 (65%), Gaps = 4/149 (2%)
 Frame = +3

Query: 321 YGLRQYMCTQMQNRPGSHKLIPPVSHRSAFRVISPDLSPGIGPRNSVTVPFGSCLGPAHP 500
           YGL QY    MQ++   H +IP V+  SA R I+PDL+  + PRN   VP  S +G A+P
Sbjct: 290 YGLMQYRMPPMQSQAAFHNMIPQVNQGSAMRAIAPDLARAVAPRN-YAVPSASYMGSAYP 348

Query: 501 PEPGLWYPVAYSGRIISHRPISR--GFTPPEIMSSRGTFQTSV--NSGTQVEGPPGANLF 668
             PGL YP+AY G I+SH+P+S   G  PP +M+S     +    +SG QVEGPPGANLF
Sbjct: 349 ALPGLQYPMAYHGGIMSHQPLSGSPGSRPPAMMTSNSPTNSGAGASSGGQVEGPPGANLF 408

Query: 669 VSNIPQEFGGQELADAFQAFGRVLSTKVF 755
           + +IPQEFG  ELA AFQ FGRVLS KVF
Sbjct: 409 IYHIPQEFGDHELAHAFQQFGRVLSAKVF 437


>ref|XP_002320377.1| predicted protein [Populus trichocarpa] gi|222861150|gb|EEE98692.1|
           predicted protein [Populus trichocarpa]
          Length = 432

 Score =  143 bits (361), Expect = 3e-32
 Identities = 77/150 (51%), Positives = 98/150 (65%), Gaps = 5/150 (3%)
 Frame = +3

Query: 321 YGLRQYMCTQMQNRPGSHKLIPPVSHRSAFRV-ISPDLSPGIGPRNSVTVPFGSCLGPAH 497
           YGL  Y    MQN+P  H ++PPV+  +  R  I PDLSP I PRN     +   +G A+
Sbjct: 234 YGLMPYRLPPMQNQPAFHSMVPPVNQGNVLRGGIRPDLSPNISPRNYAPATY---MGSAY 290

Query: 498 PPEPGLWYPVAYSGRIISHRPISR--GFTPPEIMSSRGTFQTSV--NSGTQVEGPPGANL 665
           P   GL YPVAY G +++HRP+S   G   P ++SS     + V  +SG QVEGPPGANL
Sbjct: 291 PTVTGLQYPVAYPGAMMTHRPLSSSPGALSPTVVSSNSATPSGVGGSSGVQVEGPPGANL 350

Query: 666 FVSNIPQEFGGQELADAFQAFGRVLSTKVF 755
           F+ +IPQEFG QELA+AF+AFG+VLS KVF
Sbjct: 351 FIYHIPQEFGDQELANAFEAFGKVLSAKVF 380


>ref|XP_002520700.1| RNA binding protein, putative [Ricinus communis]
           gi|223540085|gb|EEF41662.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 436

 Score =  138 bits (347), Expect = 1e-30
 Identities = 74/151 (49%), Positives = 99/151 (65%), Gaps = 5/151 (3%)
 Frame = +3

Query: 318 TYGLRQYMCTQMQNRPGSHKLIPPVSHRSAFRV-ISPDLSPGIGPRNSVTVPFGSCLGPA 494
           TYGL  Y    +Q++P  H +IPPV+  +A R  + PDL P +GPRN   +P  S +G A
Sbjct: 234 TYGLMPYRLPPLQSQPAFHSIIPPVNQGNALRGGVRPDLGPSMGPRN-YALPPASYVGSA 292

Query: 495 HPPEPGLWYPVAYSGRIISHRPISR--GFTPPEIMSSRGTFQTSVNS--GTQVEGPPGAN 662
           +P  PG+ YP+AY G ++S RP+S   G   P + SS     + V+S  G Q+EGPPG+N
Sbjct: 293 YPAVPGIQYPMAYPGGMMSPRPLSSSPGAVSPTVGSSNSATSSGVSSSSGGQLEGPPGSN 352

Query: 663 LFVSNIPQEFGGQELADAFQAFGRVLSTKVF 755
           LF+ +IPQEFG QELA AFQ +G+VLS KVF
Sbjct: 353 LFIYHIPQEFGDQELASAFQPYGKVLSAKVF 383