BLASTX nr result

ID: Coptis21_contig00010393 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010393
         (2331 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266267.1| PREDICTED: DELLA protein GAI1-like isoform 1...   686   0.0  
emb|CAN59753.1| hypothetical protein VITISV_036639 [Vitis vinifera]   677   0.0  
gb|AEX97111.1| spur-type DELLA protein [Malus x domestica]            658   0.0  
ref|XP_002312450.1| DELLA domain GRAS family transcription facto...   658   0.0  
gb|AAY56750.1| DELLA protein [Malus x domestica]                      658   0.0  

>ref|XP_002266267.1| PREDICTED: DELLA protein GAI1-like isoform 1 [Vitis vinifera]
          Length = 613

 Score =  686 bits (1769), Expect = 0.0
 Identities = 369/603 (61%), Positives = 439/603 (72%), Gaps = 41/603 (6%)
 Frame = +3

Query: 363  MKRSYQDN-----GGAGTAQGSFSMEKASMNNKMCW---QEEDAGEDELLAMLGYNVRSS 518
            MKR   D      GG G  +G       S   KM W   Q++DAG DELLA+LGYNVRSS
Sbjct: 1    MKRDLLDGCGGGGGGGGGGKGEEGSSMVSAKGKM-WDDGQQQDAGMDELLAVLGYNVRSS 59

Query: 519  DMADVASKIEQLEMMMGSSSAAQEDVLLSHLGGSDTAHYNPSDLSTWLESMICEAE--LS 692
            DM DVA K+EQLEM+MG+   AQED + SHL  S T HYNPSDLS W++SM+ E     S
Sbjct: 60   DMVDVAQKLEQLEMVMGN---AQEDGI-SHLS-SGTVHYNPSDLSGWVQSMLTELNPPSS 114

Query: 693  LPXXXXXXXXXXXPYIPPAESSTIKALIFDEPV------------SSNYDLSAIPGEVIH 836
                         P + P+ESSTI  L F                +S+YDLSAIPG  ++
Sbjct: 115  AFASSSQQTPIDDPLLAPSESSTITTLDFSGSRQQSEHQSRIYNDNSDYDLSAIPGVAVY 174

Query: 837  --------GEREKKRIKQEISSN---------NGIVTLTESTRPVVLIDSQENGIRLVHT 965
                    GE+  KR+K   SS+         NG+ ++ ESTRPVV++DSQE G+RLVHT
Sbjct: 175  RRPDQQGDGEKSSKRMKTASSSSSSSTQQVQENGLASVAESTRPVVVVDSQETGVRLVHT 234

Query: 966  LMAAAEAVQQDNLKLAESLVKQISLLAVSQAGAMRKVATYFAEALARRIYGLYPQPSLDS 1145
            LMA A+AVQQDN+KLA++LVK I LLA SQAGAMRKVATYFAEALARRIY +YPQ SL+S
Sbjct: 235  LMACADAVQQDNMKLADALVKHIGLLAASQAGAMRKVATYFAEALARRIYRIYPQDSLES 294

Query: 1146 SFSDILQIHFYETCPHLKFAHFTANQAILDSFADSNRVHIIDFSMKQGIQWPALMQALAM 1325
            S+SDILQ+HFYE CP+LKFAHFTANQAIL++FA +NRVH+IDF +KQG+QWPALMQALA+
Sbjct: 295  SYSDILQMHFYEACPYLKFAHFTANQAILEAFAGANRVHVIDFGLKQGMQWPALMQALAL 354

Query: 1326 RPNGPPSFRLTGIGPPQPDNTDALQQVGWKLAQFAENLHVEFEYRGFVCNXXXXXXXXXX 1505
            RP GPPSFRLTGIGPPQPDNTDALQQVGWKLAQ AE + VEFE+RGFV N          
Sbjct: 355  RPGGPPSFRLTGIGPPQPDNTDALQQVGWKLAQLAETIGVEFEFRGFVANSLADLEPSML 414

Query: 1506 XXRPG--ETVAVNSMFELHQLLAQPNAIDKVLGTIKEMKPKIVTIVEEEANHNGPIFFDR 1679
              RP   E VAVNS+ ELH+LLA+P AI+KVL +IK MKPKIVT+VE+EA+HNGP+F DR
Sbjct: 415  QIRPPEVEAVAVNSVLELHRLLARPGAIEKVLSSIKAMKPKIVTVVEQEASHNGPVFLDR 474

Query: 1680 FTEALHYYSTLFDSLEGYANALSPINGQDLVMSEMYFGRQICNLVACEGVDRVERHESLS 1859
            FTEALHYYS LFDSLEG    +SP + QDL+MSE+Y GRQICN+VACEG +RVERHE+LS
Sbjct: 475  FTEALHYYSNLFDSLEGC--GVSPPSSQDLMMSEIYLGRQICNVVACEGAERVERHETLS 532

Query: 1860 QWKNRMESAGFGLSHLGSNTYRQVSSLLSMFXXXXXYVVDENNGCLLLAWHTRPLVASSA 2039
            QW++RM SAGF   HLGSN ++Q S LL++F     Y V+ENNGCL+L WHTRPL+A+SA
Sbjct: 533  QWRSRMGSAGFDPVHLGSNAFKQASMLLALFAGGDGYRVEENNGCLMLGWHTRPLIATSA 592

Query: 2040 WQL 2048
            WQL
Sbjct: 593  WQL 595


>emb|CAN59753.1| hypothetical protein VITISV_036639 [Vitis vinifera]
          Length = 580

 Score =  677 bits (1746), Expect = 0.0
 Identities = 356/564 (63%), Positives = 425/564 (75%), Gaps = 33/564 (5%)
 Frame = +3

Query: 456  QEEDAGEDELLAMLGYNVRSSDMADVASKIEQLEMMMGSSSAAQEDVLLSHLGGSDTAHY 635
            Q++DAG DELLA+LGYNVRSSDM DVA K+EQLEM+MG+   AQED + SHL  S T HY
Sbjct: 6    QQQDAGMDELLAVLGYNVRSSDMVDVAQKLEQLEMVMGN---AQEDGI-SHLS-SGTVHY 60

Query: 636  NPSDLSTWLESMICEAE--LSLPXXXXXXXXXXXPYIPPAESSTIKALIFDEPV------ 791
            NPSDLS W++SM+ E     S             P + P+ESSTI  L F          
Sbjct: 61   NPSDLSGWVQSMLTELNPPSSAFASSSQQTPIDDPLLAPSESSTITTLDFSGSRQQSEHQ 120

Query: 792  ------SSNYDLSAIPGEVIH--------GEREKKRIKQEISSN---------NGIVTLT 902
                  +S+YDLSAIPG  ++        GE+  KR+K   SS+         NG+ ++ 
Sbjct: 121  SRIYNDNSDYDLSAIPGVAVYRRPDQQGDGEKSSKRMKTASSSSSSSTQQVQENGLASVA 180

Query: 903  ESTRPVVLIDSQENGIRLVHTLMAAAEAVQQDNLKLAESLVKQISLLAVSQAGAMRKVAT 1082
            ESTRPVV++DSQE G+RLVHTLMA A+AVQQDN+KLA++LVK I LLA SQAGAMRKVAT
Sbjct: 181  ESTRPVVVVDSQETGVRLVHTLMACADAVQQDNMKLADALVKHIGLLAASQAGAMRKVAT 240

Query: 1083 YFAEALARRIYGLYPQPSLDSSFSDILQIHFYETCPHLKFAHFTANQAILDSFADSNRVH 1262
            YFAEALARRIY +YPQ SL+SS+SDILQ+HFYE CP+LKFAHFTANQAIL++FA +NRVH
Sbjct: 241  YFAEALARRIYRIYPQDSLESSYSDILQMHFYEACPYLKFAHFTANQAILEAFAGANRVH 300

Query: 1263 IIDFSMKQGIQWPALMQALAMRPNGPPSFRLTGIGPPQPDNTDALQQVGWKLAQFAENLH 1442
            +IDF +KQG+QWPALMQALA+RP GPP FRLTGIGPPQPDNTDALQQVGWKLAQ AE + 
Sbjct: 301  VIDFGLKQGMQWPALMQALALRPGGPPXFRLTGIGPPQPDNTDALQQVGWKLAQLAETIG 360

Query: 1443 VEFEYRGFVCNXXXXXXXXXXXXRPG--ETVAVNSMFELHQLLAQPNAIDKVLGTIKEMK 1616
            VEFE+RGFV N            RP   E VAVNS+ ELH+LLA+P AI+KVL +IK MK
Sbjct: 361  VEFEFRGFVANSLADLEPSMLQIRPPEVEAVAVNSVLELHRLLARPGAIEKVLSSIKAMK 420

Query: 1617 PKIVTIVEEEANHNGPIFFDRFTEALHYYSTLFDSLEGYANALSPINGQDLVMSEMYFGR 1796
            PKIVT+VE+EA+HNGP+F DRFTEALHYYS LFDSLEG    +SP + QDL+MSE+Y GR
Sbjct: 421  PKIVTVVEQEASHNGPVFLDRFTEALHYYSNLFDSLEGC--GVSPPSSQDLMMSEIYLGR 478

Query: 1797 QICNLVACEGVDRVERHESLSQWKNRMESAGFGLSHLGSNTYRQVSSLLSMFXXXXXYVV 1976
            QICN+VACEG +RVERHE+LSQW++RM SAGF   HLGSN ++Q S LL++F     Y V
Sbjct: 479  QICNVVACEGAERVERHETLSQWRSRMGSAGFDPVHLGSNAFKQASMLLALFAGGDGYRV 538

Query: 1977 DENNGCLLLAWHTRPLVASSAWQL 2048
            +ENNGCL+L WHTRPL+A+SAWQL
Sbjct: 539  EENNGCLMLGWHTRPLIATSAWQL 562


>gb|AEX97111.1| spur-type DELLA protein [Malus x domestica]
          Length = 584

 Score =  658 bits (1698), Expect = 0.0
 Identities = 357/595 (60%), Positives = 431/595 (72%), Gaps = 33/595 (5%)
 Frame = +3

Query: 363  MKRSYQDNGGAGTAQGSFSMEKAS------MNNKM-CWQEEDAGE------DELLAMLGY 503
            MKR ++D+    TA+ + S  + S      +N K   W+++  G       DELLA+LGY
Sbjct: 1    MKRDHRDSRATVTARQNNSKPEYSSPPSSALNGKAKIWEDDQDGYSAGGDMDELLAVLGY 60

Query: 504  NVRSSDMADVASKIEQLEMMMGSSSAAQEDVLLSHLGGSDTAHYNPSDLSTWLESMICEA 683
             VRS DMADVA K+EQLEM+MGS   AQED + S L  SDT HYNPSDLS W++SM+ E 
Sbjct: 61   KVRSDDMADVAEKLEQLEMVMGS---AQEDGI-SQL--SDTVHYNPSDLSGWVQSMLSEL 114

Query: 684  ELSLPXXXXXXXXXXXPYIPPAESSTIKALIFDEPV-------SSNYDLSAIPGEVIH-- 836
                            P + PAESS+I ++ F            S YDL AIPG   +  
Sbjct: 115  NTG-----DDMPSIDDPLLAPAESSSITSMSFSNSQRSRVFSDDSEYDLRAIPGVAAYPP 169

Query: 837  ------GEREKKRIKQEISSN-NGIVT--LTESTRPVVLIDSQENGIRLVHTLMAAAEAV 989
                   E  +KR+K  I S+ NG  +  +++ TRP VL+DSQE G+RLVHTLMA AEAV
Sbjct: 170  AYSPSDSESTRKRLKTSIGSDSNGSSSGAVSDPTRPRVLVDSQETGVRLVHTLMACAEAV 229

Query: 990  QQDNLKLAESLVKQISLLAVSQAGAMRKVATYFAEALARRIYGLYPQPSLDSSFSDILQI 1169
            QQ+NLKLA++LVK + LLA SQ GAMRKVATYFAEALARRIY +YPQ  LDSS+SDIL++
Sbjct: 230  QQENLKLADALVKHVGLLAASQTGAMRKVATYFAEALARRIYRIYPQDCLDSSYSDILEM 289

Query: 1170 HFYETCPHLKFAHFTANQAILDSFADSNRVHIIDFSMKQGIQWPALMQALAMRPNGPPSF 1349
            HFYETCP+LKFAHFTANQAIL++FA ++RVH+IDF +KQG+QWPALMQALA+RP GPP+F
Sbjct: 290  HFYETCPYLKFAHFTANQAILEAFATASRVHVIDFGLKQGMQWPALMQALALRPGGPPAF 349

Query: 1350 RLTGIGPPQPDNTDALQQVGWKLAQFAENLHVEFEYRGFVCNXXXXXXXXXXXXRP--GE 1523
            RLTGIGPPQPDNTDALQQVGWKLAQ AE + VEFE+RGFV +            RP  GE
Sbjct: 350  RLTGIGPPQPDNTDALQQVGWKLAQLAETIGVEFEFRGFVASSLADLTPSMLDIRPSEGE 409

Query: 1524 TVAVNSMFELHQLLAQPNAIDKVLGTIKEMKPKIVTIVEEEANHNGPIFFDRFTEALHYY 1703
             VAVNS+FELH+LLA+P A+DKVL +IK MKPKIVTIVE+EANHNGP+F DRFTEALHYY
Sbjct: 410  VVAVNSVFELHRLLARPGAVDKVLSSIKAMKPKIVTIVEQEANHNGPVFLDRFTEALHYY 469

Query: 1704 STLFDSLEGYANALSPINGQDLVMSEMYFGRQICNLVACEGVDRVERHESLSQWKNRMES 1883
            S LFDSLEG +        QDLVMSE+Y GRQICN++ACEG DRVERHE+LSQW+ RM+S
Sbjct: 470  SNLFDSLEGSSGP-----SQDLVMSEVYLGRQICNVMACEGGDRVERHETLSQWRGRMDS 524

Query: 1884 AGFGLSHLGSNTYRQVSSLLSMFXXXXXYVVDENNGCLLLAWHTRPLVASSAWQL 2048
            AGF   HLGSN ++Q S LL++F     Y V+ENNG L+L WHTRPL+A+SAWQL
Sbjct: 525  AGFDPVHLGSNAFKQASMLLALFAGGDGYRVEENNGSLMLGWHTRPLIATSAWQL 579


>ref|XP_002312450.1| DELLA domain GRAS family transcription factor, GA insensitive  (GAI),
            GA1-3 1 (RGA1) repressor protein [Populus trichocarpa]
            gi|222852270|gb|EEE89817.1| DELLA domain GRAS family
            transcription factor, GA insensitive (GAI), GA1-3 1
            (RGA1) repressor protein [Populus trichocarpa]
          Length = 600

 Score =  658 bits (1698), Expect = 0.0
 Identities = 349/559 (62%), Positives = 412/559 (73%), Gaps = 29/559 (5%)
 Frame = +3

Query: 459  EEDAGEDELLAMLGYNVRSSDMADVASKIEQLEMMMGSSSAAQEDVLLSHLGGSDTAHYN 638
            + D G DELLA+LGY VRSSDMA+VA K+EQLE +MG    AQED L SHL  SD+ HYN
Sbjct: 48   QADGGMDELLAVLGYKVRSSDMAEVAQKLEQLEEVMGH---AQEDGL-SHLA-SDSVHYN 102

Query: 639  PSDLSTWLESMICEAELSLPXXXXXXXXXXXPYIPPAESSTIKAL------------IFD 782
            PSDLSTWLESMI E   +L              + PAESSTI ++            +F+
Sbjct: 103  PSDLSTWLESMISELNPNL-----NFDPSADSLLAPAESSTITSIDFSDHKHHQQQKLFE 157

Query: 783  EPVSSNYDLSAIPGEVIHGE-----REKKRIKQEI------SSNNGIVTL------TEST 911
            E  SS+YDL  IPG+ +  +     RE KR+K ++      SS +   TL      TEST
Sbjct: 158  ESSSSDYDLKVIPGKAVFSQTQIDSRESKRLKTDLYQTSSSSSLSSATTLGSFGISTEST 217

Query: 912  RPVVLIDSQENGIRLVHTLMAAAEAVQQDNLKLAESLVKQISLLAVSQAGAMRKVATYFA 1091
            RPVVL+DSQENGIRLVH LMA AEAVQ+ N  LAE+LVKQI  LAVSQAG MRKVATYFA
Sbjct: 218  RPVVLVDSQENGIRLVHLLMACAEAVQESNFTLAEALVKQIGFLAVSQAGVMRKVATYFA 277

Query: 1092 EALARRIYGLYPQPSLDSSFSDILQIHFYETCPHLKFAHFTANQAILDSFADSNRVHIID 1271
            EALARRIY L PQ S D S SDILQIHFYETCP+LKFAHFTANQAIL++F    RVH+ID
Sbjct: 278  EALARRIYKLCPQNSTDHSLSDILQIHFYETCPYLKFAHFTANQAILEAFEGKKRVHVID 337

Query: 1272 FSMKQGIQWPALMQALAMRPNGPPSFRLTGIGPPQPDNTDALQQVGWKLAQFAENLHVEF 1451
            FSM QG+QWPALMQALA+RP GPP+FRLTGIGPP  DNTD LQ+VGWKLAQ AE +HVEF
Sbjct: 338  FSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAHDNTDHLQEVGWKLAQLAETIHVEF 397

Query: 1452 EYRGFVCNXXXXXXXXXXXXRPGETVAVNSMFELHQLLAQPNAIDKVLGTIKEMKPKIVT 1631
            EYRGFV N            RP E+VAVNS+FELH+LL++P AI+KVL  +K+MKP+IVT
Sbjct: 398  EYRGFVANSLADLDASMLELRPTESVAVNSVFELHKLLSRPGAIEKVLSVVKQMKPEIVT 457

Query: 1632 IVEEEANHNGPIFFDRFTEALHYYSTLFDSLEGYANALSPINGQDLVMSEMYFGRQICNL 1811
            +VE+EANHNGPIF DRFTE+LHYYSTLFDSLEG       ++ QD +MSE+Y G+QICN+
Sbjct: 458  VVEQEANHNGPIFLDRFTESLHYYSTLFDSLEG------SVSTQDKIMSEVYLGKQICNV 511

Query: 1812 VACEGVDRVERHESLSQWKNRMESAGFGLSHLGSNTYRQVSSLLSMFXXXXXYVVDENNG 1991
            VACEG DRVERHE+L+QW+ R+ S GF   HLGSN ++Q S LL++F     Y V+ENNG
Sbjct: 512  VACEGPDRVERHETLTQWRTRLGSVGFAPVHLGSNAFKQASMLLALFAGGDGYRVEENNG 571

Query: 1992 CLLLAWHTRPLVASSAWQL 2048
            CL+L WHTRPL+A+SAW+L
Sbjct: 572  CLMLGWHTRPLIATSAWRL 590


>gb|AAY56750.1| DELLA protein [Malus x domestica]
          Length = 584

 Score =  658 bits (1698), Expect = 0.0
 Identities = 357/595 (60%), Positives = 431/595 (72%), Gaps = 33/595 (5%)
 Frame = +3

Query: 363  MKRSYQDNGGAGTAQGSFSMEKAS------MNNKM-CWQEEDAGE------DELLAMLGY 503
            MKR ++D+    TA+ + S  + S      +N K   W+++  G       DELLA+LGY
Sbjct: 1    MKRDHRDSRATVTARENNSKPEYSSPPSSALNGKAKIWEDDQDGYSAGGDMDELLAVLGY 60

Query: 504  NVRSSDMADVASKIEQLEMMMGSSSAAQEDVLLSHLGGSDTAHYNPSDLSTWLESMICEA 683
             VRS DMADVA K+EQLEM+MGS   AQED + S L  SDT HYNPSDLS W++SM+ E 
Sbjct: 61   KVRSDDMADVAEKLEQLEMVMGS---AQEDGI-SQL--SDTVHYNPSDLSGWVQSMLSEL 114

Query: 684  ELSLPXXXXXXXXXXXPYIPPAESSTIKALIFDEPV-------SSNYDLSAIPGEVIH-- 836
                            P + PAESS+I ++ F            S YDL AIPG   +  
Sbjct: 115  NTG-----DDMPSIDDPLLAPAESSSITSMSFSNSQRSRVFSDDSEYDLRAIPGVAAYPP 169

Query: 837  ------GEREKKRIKQEISSN-NGIVT--LTESTRPVVLIDSQENGIRLVHTLMAAAEAV 989
                   E  +KR+K  I S+ NG  +  +++ TRP VL+DSQE G+RLVHTLMA AEAV
Sbjct: 170  AYSPSDSESTRKRLKTSIGSDSNGSSSGAVSDPTRPRVLVDSQETGVRLVHTLMACAEAV 229

Query: 990  QQDNLKLAESLVKQISLLAVSQAGAMRKVATYFAEALARRIYGLYPQPSLDSSFSDILQI 1169
            QQ+NLKLA++LVK + LLA SQ GAMRKVATYFAEALARRIY +YPQ  LDSS+SDIL++
Sbjct: 230  QQENLKLADALVKHVGLLAASQTGAMRKVATYFAEALARRIYRIYPQDCLDSSYSDILEM 289

Query: 1170 HFYETCPHLKFAHFTANQAILDSFADSNRVHIIDFSMKQGIQWPALMQALAMRPNGPPSF 1349
            HFYETCP+LKFAHFTANQAIL++FA ++RVH+IDF +KQG+QWPALMQALA+RP GPP+F
Sbjct: 290  HFYETCPYLKFAHFTANQAILEAFATASRVHVIDFGLKQGMQWPALMQALALRPGGPPAF 349

Query: 1350 RLTGIGPPQPDNTDALQQVGWKLAQFAENLHVEFEYRGFVCNXXXXXXXXXXXXRP--GE 1523
            RLTGIGPPQPDNTDALQQVGWKLAQ AE + VEFE+RGFV +            RP  GE
Sbjct: 350  RLTGIGPPQPDNTDALQQVGWKLAQLAETIGVEFEFRGFVASSLADLTPSMLDIRPSEGE 409

Query: 1524 TVAVNSMFELHQLLAQPNAIDKVLGTIKEMKPKIVTIVEEEANHNGPIFFDRFTEALHYY 1703
             VAVNS+FELH+LLA+P A+DKVL +IK MKPKIVTIVE+EANHNGP+F DRFTEALHYY
Sbjct: 410  VVAVNSVFELHRLLARPGAVDKVLSSIKAMKPKIVTIVEQEANHNGPVFLDRFTEALHYY 469

Query: 1704 STLFDSLEGYANALSPINGQDLVMSEMYFGRQICNLVACEGVDRVERHESLSQWKNRMES 1883
            S LFDSLEG +        QDLVMSE+Y GRQICN++ACEG DRVERHE+LSQW+ RM+S
Sbjct: 470  SNLFDSLEGSSGP-----SQDLVMSEVYLGRQICNVMACEGGDRVERHETLSQWRGRMDS 524

Query: 1884 AGFGLSHLGSNTYRQVSSLLSMFXXXXXYVVDENNGCLLLAWHTRPLVASSAWQL 2048
            AGF   HLGSN ++Q S LL++F     Y V+ENNG L+L WHTRPL+A+SAWQL
Sbjct: 525  AGFDPVHLGSNAFKQASMLLALFAGGDGYRVEENNGSLMLGWHTRPLIATSAWQL 579


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