BLASTX nr result
ID: Coptis21_contig00010372
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00010372 (750 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002303123.1| predicted protein [Populus trichocarpa] gi|2... 245 8e-63 gb|ABK96079.1| unknown [Populus trichocarpa] 245 8e-63 emb|CAB77025.1| putative Rho GDP dissociation inhibitor [Nicotia... 236 5e-60 ref|XP_002526574.1| Rho GDP-dissociation inhibitor, putative [Ri... 235 6e-60 ref|XP_004164926.1| PREDICTED: rho GDP-dissociation inhibitor 1-... 230 2e-58 >ref|XP_002303123.1| predicted protein [Populus trichocarpa] gi|222844849|gb|EEE82396.1| predicted protein [Populus trichocarpa] Length = 251 Score = 245 bits (625), Expect = 8e-63 Identities = 121/160 (75%), Positives = 135/160 (84%), Gaps = 7/160 (4%) Frame = -3 Query: 460 DEDDGG-------VAGFVPGPLLTLKEQLEKDKDDESLRRWKEKLLGCVEDDLNDQMEPK 302 +EDDG VAGFVPGPLL+LKEQ+EKDK+D+SLRRWKEKLLGCVE DLN Q+EP+ Sbjct: 44 EEDDGDAVDNGVPVAGFVPGPLLSLKEQIEKDKEDDSLRRWKEKLLGCVESDLNGQLEPE 103 Query: 301 VKFHSIGIISDDCGETTTQLPVSRSQSSGVLFTLKEGSDYRLKLTFTVQQNIVSGLRYSN 122 VKFHSIGIISDD GE T LPV SQS LF L+EGS Y+LKLTF+V NIVSGL YSN Sbjct: 104 VKFHSIGIISDDIGEINTPLPVDESQSGHPLFALREGSRYQLKLTFSVLHNIVSGLAYSN 163 Query: 121 TVWKGGLKVDQSKGMLGTFAPQREPYTHTLDEETTPSGVL 2 TVWKGG++VDQSKGMLGTFAPQREPY HTL+E+TTPSGVL Sbjct: 164 TVWKGGIQVDQSKGMLGTFAPQREPYVHTLEEDTTPSGVL 203 >gb|ABK96079.1| unknown [Populus trichocarpa] Length = 235 Score = 245 bits (625), Expect = 8e-63 Identities = 121/160 (75%), Positives = 135/160 (84%), Gaps = 7/160 (4%) Frame = -3 Query: 460 DEDDGG-------VAGFVPGPLLTLKEQLEKDKDDESLRRWKEKLLGCVEDDLNDQMEPK 302 +EDDG VAGFVPGPLL+LKEQ+EKDK+D+SLRRWKEKLLGCVE DLN Q+EP+ Sbjct: 44 EEDDGDAVDNGVPVAGFVPGPLLSLKEQIEKDKEDDSLRRWKEKLLGCVESDLNGQLEPE 103 Query: 301 VKFHSIGIISDDCGETTTQLPVSRSQSSGVLFTLKEGSDYRLKLTFTVQQNIVSGLRYSN 122 VKFHSIGIISDD GE T LPV SQS LF L+EGS Y+LKLTF+V NIVSGL YSN Sbjct: 104 VKFHSIGIISDDIGEINTPLPVDESQSGHPLFALREGSRYQLKLTFSVLHNIVSGLAYSN 163 Query: 121 TVWKGGLKVDQSKGMLGTFAPQREPYTHTLDEETTPSGVL 2 TVWKGG++VDQSKGMLGTFAPQREPY HTL+E+TTPSGVL Sbjct: 164 TVWKGGIQVDQSKGMLGTFAPQREPYVHTLEEDTTPSGVL 203 >emb|CAB77025.1| putative Rho GDP dissociation inhibitor [Nicotiana tabacum] Length = 226 Score = 236 bits (601), Expect = 5e-60 Identities = 120/189 (63%), Positives = 138/189 (73%), Gaps = 6/189 (3%) Frame = -3 Query: 550 SGKMEAGPSSGLTWXXXXXXXXXXXXXXVLDEDDGGVA------GFVPGPLLTLKEQLEK 389 + K EAGPS GL + DE + A +VPGPLL+LK+Q+EK Sbjct: 6 NNKEEAGPSRGLNFSEDKRKEELEEGDSEEDEHNQDSATDIITTSYVPGPLLSLKDQIEK 65 Query: 388 DKDDESLRRWKEKLLGCVEDDLNDQMEPKVKFHSIGIISDDCGETTTQLPVSRSQSSGVL 209 DK+DESLRRWKEKLLGC+E DLN QMEP+VKFHS+GI+S D E T LPV QS VL Sbjct: 66 DKEDESLRRWKEKLLGCLESDLNGQMEPEVKFHSVGILSSDFEEINTPLPVKEGQSKSVL 125 Query: 208 FTLKEGSDYRLKLTFTVQQNIVSGLRYSNTVWKGGLKVDQSKGMLGTFAPQREPYTHTLD 29 FTL+EGS+YRLKLTF+V NIVSGL Y+NTVWK GL+VDQSKGMLGTFAPQREPY H L+ Sbjct: 126 FTLREGSEYRLKLTFSVLHNIVSGLAYTNTVWKAGLQVDQSKGMLGTFAPQREPYIHMLE 185 Query: 28 EETTPSGVL 2 EETTPSG L Sbjct: 186 EETTPSGAL 194 >ref|XP_002526574.1| Rho GDP-dissociation inhibitor, putative [Ricinus communis] gi|223534135|gb|EEF35852.1| Rho GDP-dissociation inhibitor, putative [Ricinus communis] Length = 244 Score = 235 bits (600), Expect = 6e-60 Identities = 113/147 (76%), Positives = 130/147 (88%) Frame = -3 Query: 442 VAGFVPGPLLTLKEQLEKDKDDESLRRWKEKLLGCVEDDLNDQMEPKVKFHSIGIISDDC 263 V GFVPGPLL+LK+Q++KDKDD+SLRRWKEKLLGCVE +LN QMEP+VKFHSIGIIS+D Sbjct: 66 VTGFVPGPLLSLKDQIDKDKDDDSLRRWKEKLLGCVESELNGQMEPEVKFHSIGIISNDL 125 Query: 262 GETTTQLPVSRSQSSGVLFTLKEGSDYRLKLTFTVQQNIVSGLRYSNTVWKGGLKVDQSK 83 E T LPV ++S +LFTLKEGS Y+LKLTF+V NIVSGL YSNTVWKGGL+VD++K Sbjct: 126 EEINTPLPVDANRSGRLLFTLKEGSRYQLKLTFSVLHNIVSGLTYSNTVWKGGLQVDKNK 185 Query: 82 GMLGTFAPQREPYTHTLDEETTPSGVL 2 GMLGTFAPQREPY HTL+EETTPSGVL Sbjct: 186 GMLGTFAPQREPYVHTLEEETTPSGVL 212 >ref|XP_004164926.1| PREDICTED: rho GDP-dissociation inhibitor 1-like [Cucumis sativus] Length = 214 Score = 230 bits (587), Expect = 2e-58 Identities = 110/145 (75%), Positives = 127/145 (87%) Frame = -3 Query: 436 GFVPGPLLTLKEQLEKDKDDESLRRWKEKLLGCVEDDLNDQMEPKVKFHSIGIISDDCGE 257 GF PGPLL+LKEQLEKDKDDESLRRWKEKLLGC+E DL++Q EP+VKFHSIGIISD+ GE Sbjct: 38 GFTPGPLLSLKEQLEKDKDDESLRRWKEKLLGCLESDLSEQREPEVKFHSIGIISDEFGE 97 Query: 256 TTTQLPVSRSQSSGVLFTLKEGSDYRLKLTFTVQQNIVSGLRYSNTVWKGGLKVDQSKGM 77 T LPV+ ++S VLFTL+EGS Y+L+LTFTV NIVSGL YSN VW+GGL VDQ++GM Sbjct: 98 VNTPLPVNENESGRVLFTLQEGSRYQLRLTFTVTHNIVSGLSYSNKVWRGGLIVDQTQGM 157 Query: 76 LGTFAPQREPYTHTLDEETTPSGVL 2 LGTFAPQREPY TL+EETTPSG+L Sbjct: 158 LGTFAPQREPYVETLEEETTPSGIL 182