BLASTX nr result

ID: Coptis21_contig00010372 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010372
         (750 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303123.1| predicted protein [Populus trichocarpa] gi|2...   245   8e-63
gb|ABK96079.1| unknown [Populus trichocarpa]                          245   8e-63
emb|CAB77025.1| putative Rho GDP dissociation inhibitor [Nicotia...   236   5e-60
ref|XP_002526574.1| Rho GDP-dissociation inhibitor, putative [Ri...   235   6e-60
ref|XP_004164926.1| PREDICTED: rho GDP-dissociation inhibitor 1-...   230   2e-58

>ref|XP_002303123.1| predicted protein [Populus trichocarpa] gi|222844849|gb|EEE82396.1|
           predicted protein [Populus trichocarpa]
          Length = 251

 Score =  245 bits (625), Expect = 8e-63
 Identities = 121/160 (75%), Positives = 135/160 (84%), Gaps = 7/160 (4%)
 Frame = -3

Query: 460 DEDDGG-------VAGFVPGPLLTLKEQLEKDKDDESLRRWKEKLLGCVEDDLNDQMEPK 302
           +EDDG        VAGFVPGPLL+LKEQ+EKDK+D+SLRRWKEKLLGCVE DLN Q+EP+
Sbjct: 44  EEDDGDAVDNGVPVAGFVPGPLLSLKEQIEKDKEDDSLRRWKEKLLGCVESDLNGQLEPE 103

Query: 301 VKFHSIGIISDDCGETTTQLPVSRSQSSGVLFTLKEGSDYRLKLTFTVQQNIVSGLRYSN 122
           VKFHSIGIISDD GE  T LPV  SQS   LF L+EGS Y+LKLTF+V  NIVSGL YSN
Sbjct: 104 VKFHSIGIISDDIGEINTPLPVDESQSGHPLFALREGSRYQLKLTFSVLHNIVSGLAYSN 163

Query: 121 TVWKGGLKVDQSKGMLGTFAPQREPYTHTLDEETTPSGVL 2
           TVWKGG++VDQSKGMLGTFAPQREPY HTL+E+TTPSGVL
Sbjct: 164 TVWKGGIQVDQSKGMLGTFAPQREPYVHTLEEDTTPSGVL 203


>gb|ABK96079.1| unknown [Populus trichocarpa]
          Length = 235

 Score =  245 bits (625), Expect = 8e-63
 Identities = 121/160 (75%), Positives = 135/160 (84%), Gaps = 7/160 (4%)
 Frame = -3

Query: 460 DEDDGG-------VAGFVPGPLLTLKEQLEKDKDDESLRRWKEKLLGCVEDDLNDQMEPK 302
           +EDDG        VAGFVPGPLL+LKEQ+EKDK+D+SLRRWKEKLLGCVE DLN Q+EP+
Sbjct: 44  EEDDGDAVDNGVPVAGFVPGPLLSLKEQIEKDKEDDSLRRWKEKLLGCVESDLNGQLEPE 103

Query: 301 VKFHSIGIISDDCGETTTQLPVSRSQSSGVLFTLKEGSDYRLKLTFTVQQNIVSGLRYSN 122
           VKFHSIGIISDD GE  T LPV  SQS   LF L+EGS Y+LKLTF+V  NIVSGL YSN
Sbjct: 104 VKFHSIGIISDDIGEINTPLPVDESQSGHPLFALREGSRYQLKLTFSVLHNIVSGLAYSN 163

Query: 121 TVWKGGLKVDQSKGMLGTFAPQREPYTHTLDEETTPSGVL 2
           TVWKGG++VDQSKGMLGTFAPQREPY HTL+E+TTPSGVL
Sbjct: 164 TVWKGGIQVDQSKGMLGTFAPQREPYVHTLEEDTTPSGVL 203


>emb|CAB77025.1| putative Rho GDP dissociation inhibitor [Nicotiana tabacum]
          Length = 226

 Score =  236 bits (601), Expect = 5e-60
 Identities = 120/189 (63%), Positives = 138/189 (73%), Gaps = 6/189 (3%)
 Frame = -3

Query: 550 SGKMEAGPSSGLTWXXXXXXXXXXXXXXVLDEDDGGVA------GFVPGPLLTLKEQLEK 389
           + K EAGPS GL +                DE +   A       +VPGPLL+LK+Q+EK
Sbjct: 6   NNKEEAGPSRGLNFSEDKRKEELEEGDSEEDEHNQDSATDIITTSYVPGPLLSLKDQIEK 65

Query: 388 DKDDESLRRWKEKLLGCVEDDLNDQMEPKVKFHSIGIISDDCGETTTQLPVSRSQSSGVL 209
           DK+DESLRRWKEKLLGC+E DLN QMEP+VKFHS+GI+S D  E  T LPV   QS  VL
Sbjct: 66  DKEDESLRRWKEKLLGCLESDLNGQMEPEVKFHSVGILSSDFEEINTPLPVKEGQSKSVL 125

Query: 208 FTLKEGSDYRLKLTFTVQQNIVSGLRYSNTVWKGGLKVDQSKGMLGTFAPQREPYTHTLD 29
           FTL+EGS+YRLKLTF+V  NIVSGL Y+NTVWK GL+VDQSKGMLGTFAPQREPY H L+
Sbjct: 126 FTLREGSEYRLKLTFSVLHNIVSGLAYTNTVWKAGLQVDQSKGMLGTFAPQREPYIHMLE 185

Query: 28  EETTPSGVL 2
           EETTPSG L
Sbjct: 186 EETTPSGAL 194


>ref|XP_002526574.1| Rho GDP-dissociation inhibitor, putative [Ricinus communis]
           gi|223534135|gb|EEF35852.1| Rho GDP-dissociation
           inhibitor, putative [Ricinus communis]
          Length = 244

 Score =  235 bits (600), Expect = 6e-60
 Identities = 113/147 (76%), Positives = 130/147 (88%)
 Frame = -3

Query: 442 VAGFVPGPLLTLKEQLEKDKDDESLRRWKEKLLGCVEDDLNDQMEPKVKFHSIGIISDDC 263
           V GFVPGPLL+LK+Q++KDKDD+SLRRWKEKLLGCVE +LN QMEP+VKFHSIGIIS+D 
Sbjct: 66  VTGFVPGPLLSLKDQIDKDKDDDSLRRWKEKLLGCVESELNGQMEPEVKFHSIGIISNDL 125

Query: 262 GETTTQLPVSRSQSSGVLFTLKEGSDYRLKLTFTVQQNIVSGLRYSNTVWKGGLKVDQSK 83
            E  T LPV  ++S  +LFTLKEGS Y+LKLTF+V  NIVSGL YSNTVWKGGL+VD++K
Sbjct: 126 EEINTPLPVDANRSGRLLFTLKEGSRYQLKLTFSVLHNIVSGLTYSNTVWKGGLQVDKNK 185

Query: 82  GMLGTFAPQREPYTHTLDEETTPSGVL 2
           GMLGTFAPQREPY HTL+EETTPSGVL
Sbjct: 186 GMLGTFAPQREPYVHTLEEETTPSGVL 212


>ref|XP_004164926.1| PREDICTED: rho GDP-dissociation inhibitor 1-like [Cucumis sativus]
          Length = 214

 Score =  230 bits (587), Expect = 2e-58
 Identities = 110/145 (75%), Positives = 127/145 (87%)
 Frame = -3

Query: 436 GFVPGPLLTLKEQLEKDKDDESLRRWKEKLLGCVEDDLNDQMEPKVKFHSIGIISDDCGE 257
           GF PGPLL+LKEQLEKDKDDESLRRWKEKLLGC+E DL++Q EP+VKFHSIGIISD+ GE
Sbjct: 38  GFTPGPLLSLKEQLEKDKDDESLRRWKEKLLGCLESDLSEQREPEVKFHSIGIISDEFGE 97

Query: 256 TTTQLPVSRSQSSGVLFTLKEGSDYRLKLTFTVQQNIVSGLRYSNTVWKGGLKVDQSKGM 77
             T LPV+ ++S  VLFTL+EGS Y+L+LTFTV  NIVSGL YSN VW+GGL VDQ++GM
Sbjct: 98  VNTPLPVNENESGRVLFTLQEGSRYQLRLTFTVTHNIVSGLSYSNKVWRGGLIVDQTQGM 157

Query: 76  LGTFAPQREPYTHTLDEETTPSGVL 2
           LGTFAPQREPY  TL+EETTPSG+L
Sbjct: 158 LGTFAPQREPYVETLEEETTPSGIL 182


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