BLASTX nr result
ID: Coptis21_contig00010370
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00010370
(1738 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containi... 708 0.0
emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera] 706 0.0
ref|XP_002523895.1| pentatricopeptide repeat-containing protein,... 666 0.0
ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containi... 648 0.0
ref|XP_002533225.1| pentatricopeptide repeat-containing protein,... 620 e-175
>ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein At2g16880-like
[Vitis vinifera]
Length = 778
Score = 708 bits (1827), Expect = 0.0
Identities = 342/576 (59%), Positives = 444/576 (77%), Gaps = 2/576 (0%)
Frame = -1
Query: 1738 HGCCLKYKFKDAMEFLNKMSEFGCSPDNITYNTILDAFSKRGMLNEARDLLVEMKDKGLR 1559
+G CL+ KFKDA+EFLN M ++ CSPDN+TYNTILD K+G L +ARDLL++MK +GL
Sbjct: 216 YGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDTLCKKGRLGDARDLLMDMKSRGLL 275
Query: 1558 PDKKTFNTLVSGYCRLGWLKEAAQTVDLMTQANLCPDIWTYNMLLSGFCKVDRMEEAFRF 1379
P++ T+N LV GYC++GWLKEAA ++LMTQ NL PD+WTYNML++G C R+EEAF+
Sbjct: 276 PNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKL 335
Query: 1378 RGEMESMKVLPDVVTYNTLINGCFVWNDSSGALMLFEEMGKKGVKPNAVTYNVMVKGLCK 1199
R EME++K+LPDVV+YNTLINGC W+ S A L EEM +KGVKPNAVT+N+MVK CK
Sbjct: 336 RDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCK 395
Query: 1198 EGKIEEASQSIRKMEENGISPDCVTYNNLMHGCCKEGNMVAAYETMREMLRKGLKMDIFT 1019
EGK+++AS +I KMEE+G SPDCVTYN L++G CK GNM A+ TM EM RK +KMD T
Sbjct: 396 EGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVT 455
Query: 1018 LNTFLHALCKEKKLDVAYELLHNA--KGYDPDEVSYGTLIMGYFKDEDVDRALKLWGEMK 845
LNT L LC+EKKL+ AY+LL +A +GY DEVSYGTLI+GYFKD +VDRALKLW EMK
Sbjct: 456 LNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMK 515
Query: 844 NKGILPSVVTYNSVIGGLCKSGKTEQAMAKLKELLESGLVPDKTTYSTLVHGYCWHGDMD 665
K I+PS VTYN +IGGLC+ GKTEQA++KL ELLESGL+PD+TTY+T++HGYC GD++
Sbjct: 516 EKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVE 575
Query: 664 KALEFYNEMVANSFKPDIITRNILLHGLCSEKMVDKAHKLYNIWLSKGKSVDAITYNTLI 485
KA +F+N+MV NSFKPD+ T NILL GLC E +++KA KL+N W+SKGK++D +TYNTLI
Sbjct: 576 KAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLI 635
Query: 484 RGLCIEGKIEAALELLTEMQENKLKPDYFTYNALICGLAEAGRIEEAQLFVTKMAEMGKT 305
LC EG+++ A LL+EM+E +L PD++TYNA+I L ++GRI EA+ F++KM E G
Sbjct: 636 TSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGNL 695
Query: 304 PDTCCIAALEKDISQGIQTEKNVEMLARESPQQDSDSSSIAYSKCIDELCNAGKFREASA 125
PD Q +Q +KN ++ E+ ++SDSSS+AYS+ I ELC GK+++A
Sbjct: 696 PD------------QVLQLDKNETVVTSET-SEESDSSSVAYSEWIKELCTEGKYKDAMR 742
Query: 124 TLEEMVQKGIKVNSSIYISLMHGLIKRQKSIAKMSR 17
E QKGI V+ S YI+LM GLIKR+KSI+K +R
Sbjct: 743 IFGESKQKGITVDKSTYINLMDGLIKRRKSISKEAR 778
>emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
Length = 778
Score = 706 bits (1821), Expect = 0.0
Identities = 342/576 (59%), Positives = 443/576 (76%), Gaps = 2/576 (0%)
Frame = -1
Query: 1738 HGCCLKYKFKDAMEFLNKMSEFGCSPDNITYNTILDAFSKRGMLNEARDLLVEMKDKGLR 1559
+G CL+ KFKDA+EFLN M ++ CSPDN+TYNTILDA K+G L +ARDLL++MK +GL
Sbjct: 216 YGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGRLGDARDLLMDMKSRGLL 275
Query: 1558 PDKKTFNTLVSGYCRLGWLKEAAQTVDLMTQANLCPDIWTYNMLLSGFCKVDRMEEAFRF 1379
P++ T+N LV GYC++GWLKEAA ++LMTQ NL PD+WTYNML++G C R+EEAF+
Sbjct: 276 PNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKL 335
Query: 1378 RGEMESMKVLPDVVTYNTLINGCFVWNDSSGALMLFEEMGKKGVKPNAVTYNVMVKGLCK 1199
R EME++K+LPDVV+YNTLINGC W+ S A L EEM +KGVKPNAVT+N+MVK CK
Sbjct: 336 RDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCK 395
Query: 1198 EGKIEEASQSIRKMEENGISPDCVTYNNLMHGCCKEGNMVAAYETMREMLRKGLKMDIFT 1019
EGK+++AS +I KMEE+G SPDCVTYN L++G CK GNM A+ TM EM RK +KMD T
Sbjct: 396 EGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVT 455
Query: 1018 LNTFLHALCKEKKLDVAYELLHNA--KGYDPDEVSYGTLIMGYFKDEDVDRALKLWGEMK 845
LNT L LC+EKKL+ AY+LL +A +GY DEVSYGTLI+GYFKD +VDRALKLW EMK
Sbjct: 456 LNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMK 515
Query: 844 NKGILPSVVTYNSVIGGLCKSGKTEQAMAKLKELLESGLVPDKTTYSTLVHGYCWHGDMD 665
K I+PS VTYN +IGGLC+ GKTEQA++KL ELLESGL+PD+TTY+T++HGYC GD++
Sbjct: 516 EKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVE 575
Query: 664 KALEFYNEMVANSFKPDIITRNILLHGLCSEKMVDKAHKLYNIWLSKGKSVDAITYNTLI 485
KA +F+N+MV NSFKPD+ T NILL GLC E M++KA KL+N W+SKGK++D +TYNTLI
Sbjct: 576 KAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLI 635
Query: 484 RGLCIEGKIEAALELLTEMQENKLKPDYFTYNALICGLAEAGRIEEAQLFVTKMAEMGKT 305
LC EG+++ A LL+EM+E +L PD++TYNA+I L ++GRI EA+ F++KM E G
Sbjct: 636 TSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGXL 695
Query: 304 PDTCCIAALEKDISQGIQTEKNVEMLARESPQQDSDSSSIAYSKCIDELCNAGKFREASA 125
P Q +Q + N ++ E+ ++SDSSS+AYS+ I ELC GK+++A
Sbjct: 696 P------------XQVLQLDXNETVVTSET-SEESDSSSVAYSEWIKELCTEGKYKDAMR 742
Query: 124 TLEEMVQKGIKVNSSIYISLMHGLIKRQKSIAKMSR 17
E QKGI V+ S YI+LM GLIKR+KSI+K +R
Sbjct: 743 IFGESKQKGITVDKSTYINLMDGLIKRRKSISKEAR 778
>ref|XP_002523895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223536825|gb|EEF38464.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 784
Score = 666 bits (1719), Expect = 0.0
Identities = 322/573 (56%), Positives = 428/573 (74%), Gaps = 2/573 (0%)
Frame = -1
Query: 1738 HGCCLKYKFKDAMEFLNKMSEFGCSPDNITYNTILDAFSKRGMLNEARDLLVEMKDKGLR 1559
+GCC++ K +A+ + KM +F C PDN++YNTILD K+G LNEARDLL++MK+ GL
Sbjct: 220 YGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLL 279
Query: 1558 PDKKTFNTLVSGYCRLGWLKEAAQTVDLMTQANLCPDIWTYNMLLSGFCKVDRMEEAFRF 1379
P++ TFN LVSGYC+LGWLKEAAQ +DLM Q N+ PD+WTYNML+ G CK +++EAFR
Sbjct: 280 PNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAFRL 339
Query: 1378 RGEMESMKVLPDVVTYNTLINGCFVWNDSSGALMLFEEMGKKGVKPNAVTYNVMVKGLCK 1199
+ EME++K+LPDVVTYNTLINGCF + S L ++M KGVKPNAVTYNV+VK K
Sbjct: 340 KDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKMEGKGVKPNAVTYNVVVKWYVK 399
Query: 1198 EGKIEEASQSIRKMEENGISPDCVTYNNLMHGCCKEGNMVAAYETMREMLRKGLKMDIFT 1019
EGK++ A +RKMEE+G SPDCVT+N L++G CK G + A+ M EM RKGLKM+ T
Sbjct: 400 EGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVT 459
Query: 1018 LNTFLHALCKEKKLDVAYELLHNA--KGYDPDEVSYGTLIMGYFKDEDVDRALKLWGEMK 845
LNT LH LC E+KLD AY+LL +A +GY DEVSYGTLIMGYFKD A+KLW EMK
Sbjct: 460 LNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMK 519
Query: 844 NKGILPSVVTYNSVIGGLCKSGKTEQAMAKLKELLESGLVPDKTTYSTLVHGYCWHGDMD 665
K I+PS++TYN++IGGLC SGKT+Q++ KL ELLESGLVPD+TTY+T++ GYC G ++
Sbjct: 520 EKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTIILGYCREGQVE 579
Query: 664 KALEFYNEMVANSFKPDIITRNILLHGLCSEKMVDKAHKLYNIWLSKGKSVDAITYNTLI 485
KA +F+N+MV SFKPD+ T NILL GLC+E M+DKA KL+N W+SKGK++DA+TYNT+I
Sbjct: 580 KAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTWISKGKAIDAVTYNTII 639
Query: 484 RGLCIEGKIEAALELLTEMQENKLKPDYFTYNALICGLAEAGRIEEAQLFVTKMAEMGKT 305
GLC E + E A +LL EM+E KL PD +TYNA++ LA+AGR++EA+ F++++ E GK
Sbjct: 640 SGLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNAILSALADAGRMKEAEEFMSRIVEQGKL 699
Query: 304 PDTCCIAALEKDISQGIQTEKNVEMLARESPQQDSDSSSIAYSKCIDELCNAGKFREASA 125
D I+ ++ I +T Q+SD +S+ +S+ I+ELC GK+++A
Sbjct: 700 QDQ-TISLNKRKIESSSET------------SQESDPNSVTFSEQINELCTQGKYKDAMH 746
Query: 124 TLEEMVQKGIKVNSSIYISLMHGLIKRQKSIAK 26
++E QKGI ++ S YISLM GLIKR+KSI++
Sbjct: 747 MVQESTQKGITLHKSTYISLMEGLIKRRKSISR 779
Score = 243 bits (620), Expect = 1e-61
Identities = 168/575 (29%), Positives = 276/575 (48%), Gaps = 45/575 (7%)
Frame = -1
Query: 1642 TILDAFSKRGMLNEARDLLVEMKDKGLRPDKKTFNTLVSGYCRLGWLKEAAQTVDLMTQA 1463
++L AF + L+ K ++ + +T + Y AAQ + M +
Sbjct: 109 SLLTAFISADRTHLLHHHLLHSPFKKVQSLRVILDTSIGAYVACNRPHHAAQIFNRMKRL 168
Query: 1462 NLCPDIWTYNMLLSGFCKVDRMEEAFRFRG---EMESMKVLPDVVTYNTLINGCFVWNDS 1292
+L P++ T N L++ + + + ++ + V + T+N LI GC + N
Sbjct: 169 HLKPNLLTCNTLINALVRYPSKPSVYLSKAIFSDVIKLGVKVNTNTFNILIYGCCIENKL 228
Query: 1291 SGALMLFEEMGKKGVKPNAVTYNVMVKGLCKEGKIEEASQSIRKMEENGISPDCVTYNNL 1112
S A+ L +M P+ V+YN ++ LCK+GK+ EA + M+ NG+ P+ T+N L
Sbjct: 229 SEAIGLIGKMKDFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNIL 288
Query: 1111 MHGCCKEGNMVAAYETMREMLRKGLKMDIFTLNTFLHALCKEKKLDVAYELLHNAKGYD- 935
+ G CK G + A + + M + + D++T N + LCK+ K+D A+ L +
Sbjct: 289 VSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKL 348
Query: 934 -PDEVSYGTLIMGYFKDEDVDRALKLWGEMKNKGILPSVVTYNSVIGGLCKSGKTEQAMA 758
PD V+Y TLI G F + +L +M+ KG+ P+ VTYN V+ K GK + A
Sbjct: 349 LPDVVTYNTLINGCFDCSSSLKGFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGN 408
Query: 757 KLKELLESGLVPDKTTYSTLVHGYCWHGDMDKALEFYNEMVANSFKPDIITRNILLHGLC 578
+L+++ ESG PD T++TL++GYC G + +A +EM K + +T N +LH LC
Sbjct: 409 ELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLC 468
Query: 577 SEKMVDKAHKLYNI-------------------WLSKGKSVDA----------------I 503
E+ +D A+KL + + GKSV+A I
Sbjct: 469 GERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSII 528
Query: 502 TYNTLIRGLCIEGKIEAALELLTEMQENKLKPDYFTYNALICGLAEAGRIEEAQLFVTKM 323
TYNT+I GLC GK + +++ L E+ E+ L PD TYN +I G G++E+A F KM
Sbjct: 529 TYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKM 588
Query: 322 AEMGKTPD--TCCIAALEKDISQGIQTEKNVE---MLARESPQQDSDSSSIAYSKCIDEL 158
+ PD TC I + +G+ TE ++ L + ++ Y+ I L
Sbjct: 589 VKKSFKPDLFTCNI------LLRGLCTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGL 642
Query: 157 CNAGKFREASATLEEMVQKGIKVNSSIYISLMHGL 53
C +F EA L EM +K + + Y +++ L
Sbjct: 643 CKEDRFEEAFDLLAEMEEKKLGPDCYTYNAILSAL 677
Score = 122 bits (305), Expect = 4e-25
Identities = 91/347 (26%), Positives = 152/347 (43%), Gaps = 1/347 (0%)
Frame = -1
Query: 1075 AYETMREMLRKGLKMDIFTLNTFLHALCKEKKLDVAYELLHNAKGYDPDEVSYGTLIMGY 896
A + M R LK ++ T NT ++AL + Y L
Sbjct: 158 AAQIFNRMKRLHLKPNLLTCNTLINALVRYPSKPSVY------------------LSKAI 199
Query: 895 FKDEDVDRALKLWGEMKNKGILPSVVTYNSVIGGLCKSGKTEQAMAKLKELLESGLVPDK 716
F D +KL G+ + T+N +I G C K +A+ + ++ + PD
Sbjct: 200 FSD-----VIKL-------GVKVNTNTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDN 247
Query: 715 TTYSTLVHGYCWHGDMDKALEFYNEMVANSFKPDIITRNILLHGLCSEKMVDKAHKLYNI 536
+Y+T++ C G +++A + +M N P+ T NIL+ G C + +A ++ ++
Sbjct: 248 VSYNTILDVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDL 307
Query: 535 WLSKGKSVDAITYNTLIRGLCIEGKIEAALELLTEMQENKLKPDYFTYNALICGLAEAGR 356
D TYN LI GLC +GKI+ A L EM+ KL PD TYN LI G +
Sbjct: 308 MAQNNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSS 367
Query: 355 IEEAQLFVTKMAEMGKTPDTCCIAALEK-DISQGIQTEKNVEMLARESPQQDSDSSSIAY 179
+ + KM G P+ + K + +G E+ R+ + + +
Sbjct: 368 SLKGFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNEL--RKMEESGFSPDCVTF 425
Query: 178 SKCIDELCNAGKFREASATLEEMVQKGIKVNSSIYISLMHGLIKRQK 38
+ I+ C AG+ EA ++EM +KG+K+NS +++H L +K
Sbjct: 426 NTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERK 472
>ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containing protein At2g16880-like
[Cucumis sativus] gi|449529106|ref|XP_004171542.1|
PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Cucumis sativus]
Length = 783
Score = 648 bits (1672), Expect = 0.0
Identities = 322/576 (55%), Positives = 415/576 (72%), Gaps = 2/576 (0%)
Frame = -1
Query: 1738 HGCCLKYKFKDAMEFLNKMSEFGCSPDNITYNTILDAFSKRGMLNEARDLLVEMKDKGLR 1559
+G CL+ K KDA++++NKMSEFGC PD ++YNTILDA KR +L EARDLL++MK KGL
Sbjct: 221 YGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILDALLKRRLLQEARDLLLDMKSKGLS 280
Query: 1558 PDKKTFNTLVSGYCRLGWLKEAAQTVDLMTQANLCPDIWTYNMLLSGFCKVDRMEEAFRF 1379
P+K T+N LV GYCRLG LKEA + +++MT+ NL P +WTYNML++GFC +++EAFR
Sbjct: 281 PNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAFRI 340
Query: 1378 RGEMESMKVLPDVVTYNTLINGCFVWNDSSGALMLFEEMGKKGVKPNAVTYNVMVKGLCK 1199
R EME M VLPDVVTYNTLI+GC W DSS L EEM KKGVK NAVTYN+++K +CK
Sbjct: 341 RDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIILKWMCK 400
Query: 1198 EGKIEEASQSIRKMEENGISPDCVTYNNLMHGCCKEGNMVAAYETMREMLRKGLKMDIFT 1019
+G + EA+ ++ KMEENG+SPDCVTYN L+ CK G M A+ M EM KGLK+D +T
Sbjct: 401 KGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWT 460
Query: 1018 LNTFLHALCKEKKLDVAYELLHNA--KGYDPDEVSYGTLIMGYFKDEDVDRALKLWGEMK 845
LNT LH LC EKKLD AY LL +A +GY DEVSYG LI+GYFKDE DRAL LW EMK
Sbjct: 461 LNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRALNLWDEMK 520
Query: 844 NKGILPSVVTYNSVIGGLCKSGKTEQAMAKLKELLESGLVPDKTTYSTLVHGYCWHGDMD 665
+ I+PS +TYNSVIGGLC+S K +QA+ KL E+LE+GLVPD+TTY+ ++HG+C G+++
Sbjct: 521 ERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVE 580
Query: 664 KALEFYNEMVANSFKPDIITRNILLHGLCSEKMVDKAHKLYNIWLSKGKSVDAITYNTLI 485
KA +F+NEM+ N FKPD+ T NILL GLC E M++KA KL+N +SKGK +D +TYNT+I
Sbjct: 581 KAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKALKLFNTLVSKGKDIDVVTYNTII 640
Query: 484 RGLCIEGKIEAALELLTEMQENKLKPDYFTYNALICGLAEAGRIEEAQLFVTKMAEMGKT 305
LC EGK E A +LLTEM+ KL PD +TY +I L +AGRI+EA+ F KM E G
Sbjct: 641 SSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIAALTDAGRIKEAEEFTLKMVESGIV 700
Query: 304 PDTCCIAALEKDISQGIQTEKNVEMLARESPQQDSDSSSIAYSKCIDELCNAGKFREASA 125
D Q ++ K +L E + D SIAYS I+ELCN K+++A
Sbjct: 701 HD------------QNLKLGKGQNVLTSE-VSEHFDFKSIAYSDQINELCNQHKYKDAMH 747
Query: 124 TLEEMVQKGIKVNSSIYISLMHGLIKRQKSIAKMSR 17
E+ ++G+ +N Y++LM GLIKR+KS +K SR
Sbjct: 748 LFVEVTKEGVALNKYTYLNLMEGLIKRRKSTSKASR 783
Score = 132 bits (333), Expect = 2e-28
Identities = 91/351 (25%), Positives = 161/351 (45%), Gaps = 5/351 (1%)
Frame = -1
Query: 1075 AYETMREMLRKGLKMDIFTLNTFLHALCK---EKKLDVAYELLHNA--KGYDPDEVSYGT 911
A + +M R + ++ T NT +++L + + +A ++L ++ G P+ S+
Sbjct: 159 ATQIFNKMKRLNYRPNLLTCNTLMNSLVRYPSSSSILLARQVLKDSIKLGVVPNTNSFNI 218
Query: 910 LIMGYFKDEDVDRALKLWGEMKNKGILPSVVTYNSVIGGLCKSGKTEQAMAKLKELLESG 731
LI GY + V AL +M G +P V+YN+++ L K ++A L ++ G
Sbjct: 219 LIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILDALLKRRLLQEARDLLLDMKSKG 278
Query: 730 LVPDKTTYSTLVHGYCWHGDMDKALEFYNEMVANSFKPDIITRNILLHGLCSEKMVDKAH 551
L P+K TY+ LV GYC G + +A + M N+ P + T N+L++G C++ +D+A
Sbjct: 279 LSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAF 338
Query: 550 KLYNIWLSKGKSVDAITYNTLIRGLCIEGKIEAALELLTEMQENKLKPDYFTYNALICGL 371
++ + D +TYNTLI G L+ EM + +K + TYN ++ +
Sbjct: 339 RIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIILKWM 398
Query: 370 AEAGRIEEAQLFVTKMAEMGKTPDTCCIAALEKDISQGIQTEKNVEMLARESPQQDSDSS 191
+ G + EA + KM E G +PD
Sbjct: 399 CKKGNMTEATTTLDKMEENGLSPD------------------------------------ 422
Query: 190 SIAYSKCIDELCNAGKFREASATLEEMVQKGIKVNSSIYISLMHGLIKRQK 38
+ Y+ I C AGK +A ++EM KG+K+++ +++H L +K
Sbjct: 423 CVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKK 473
>ref|XP_002533225.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223526957|gb|EEF29157.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 605
Score = 620 bits (1598), Expect = e-175
Identities = 308/566 (54%), Positives = 408/566 (72%), Gaps = 2/566 (0%)
Frame = -1
Query: 1735 GCCLKYKFKDAMEFLNKMSEFGCSPDNITYNTILDAFSKRGMLNEARDLLVEMKDKGLRP 1556
GCC++ K +A+ + KM F C PDN++YNTILD K+G LNEARDLL++MK+ GL P
Sbjct: 57 GCCIENKLSEAIGLIGKMKHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFP 116
Query: 1555 DKKTFNTLVSGYCRLGWLKEAAQTVDLMTQANLCPDIWTYNMLLSGFCKVDRMEEAFRFR 1376
++ TFN LVSGYC+LGWLKEAA+ +D+M + N+ PD+ TY L+ G CK +++EAFR R
Sbjct: 117 NRNTFNILVSGYCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLR 176
Query: 1375 GEMESMKVLPDVVTYNTLINGCFVWNDSSGALMLFEEMGKKGVKPNAVTYNVMVKGLCKE 1196
EME++K+LP VVTYN LINGCF + S L +EM KGVKPNAVTYNV+VK KE
Sbjct: 177 DEMENLKLLPHVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKE 236
Query: 1195 GKIEEASQSIRKMEENGISPDCVTYNNLMHGCCKEGNMVAAYETMREMLRKGLKMDIFTL 1016
GK++ A +RKMEE+G SPDCVT+N L +G CK G + A+ M EM RKGLKM+ TL
Sbjct: 237 GKMDNAGNELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTL 296
Query: 1015 NTFLHALCKEKKLDVAYELLHNA--KGYDPDEVSYGTLIMGYFKDEDVDRALKLWGEMKN 842
NT LH LC E+KLD AY+LL +A +GY DEVSYGTLIMGYFK V ++ W EMK
Sbjct: 297 NTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFK---VGKS-XXWDEMKE 352
Query: 841 KGILPSVVTYNSVIGGLCKSGKTEQAMAKLKELLESGLVPDKTTYSTLVHGYCWHGDMDK 662
K I+PS++TY ++IGGLC+SGKT+Q++ K ELLESGLVPD+TTY+T++ GYC G +DK
Sbjct: 353 KEIIPSIITYGTMIGGLCRSGKTDQSIDKCNELLESGLVPDQTTYNTIILGYCREGQVDK 412
Query: 661 ALEFYNEMVANSFKPDIITRNILLHGLCSEKMVDKAHKLYNIWLSKGKSVDAITYNTLIR 482
A F N+MV SFKPD+ T NIL+ GLC+E M+DKA KL+ W+SKGK++DA+T+NT+I
Sbjct: 413 AFHFRNKMVKKSFKPDLFTCNILVRGLCTEGMLDKALKLFKTWISKGKAIDAVTFNTIIS 472
Query: 481 GLCIEGKIEAALELLTEMQENKLKPDYFTYNALICGLAEAGRIEEAQLFVTKMAEMGKTP 302
GLC EG+ E A +LL EM+E KL PD +T+NA++ LA+AGR++EA+ F++ + E GK
Sbjct: 473 GLCEEGRFEEAFDLLAEMEEKKLGPDCYTHNAILSALADAGRMKEAEEFMSGIVEQGKLQ 532
Query: 301 DTCCIAALEKDISQGIQTEKNVEMLARESPQQDSDSSSIAYSKCIDELCNAGKFREASAT 122
D Q I K + E+ Q+SD +S+A+S+ I+ELC GK+++A
Sbjct: 533 D------------QTISLNKRKTESSSET-SQESDPNSVAFSEQINELCTQGKYKDAMHM 579
Query: 121 LEEMVQKGIKVNSSIYISLMHGLIKR 44
++E QKGI ++ S YISLM GLIKR
Sbjct: 580 IQESTQKGIILHKSTYISLMEGLIKR 605
Score = 226 bits (576), Expect = 1e-56
Identities = 152/499 (30%), Positives = 242/499 (48%), Gaps = 41/499 (8%)
Frame = -1
Query: 1474 MTQANLCPDIWTYNMLLSGFCKVDRMEEAFRFRG---EMESMKVLPDVVTYNTLINGCFV 1304
M + +L P++ T N L+ + + + ++ + V + T+N LI GC +
Sbjct: 1 MKRLHLKPNLLTLNTLIKALVRYPSKPSVYLSKAIFSDVIKLGVEVNTNTFNILICGCCI 60
Query: 1303 WNDSSGALMLFEEMGKKGVKPNAVTYNVMVKGLCKEGKIEEASQSIRKMEENGISPDCVT 1124
N S A+ L +M P+ V+YN ++ LCK+GK+ EA + M+ NG+ P+ T
Sbjct: 61 ENKLSEAIGLIGKMKHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNT 120
Query: 1123 YNNLMHGCCKEGNMVAAYETMREMLRKGLKMDIFTLNTFLHALCKEKKLDVAYELLHNAK 944
+N L+ G CK G + A E + M R + D+ T T + LCK+ K+D A+ L +
Sbjct: 121 FNILVSGYCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEME 180
Query: 943 GYD--PDEVSYGTLIMGYFKDEDVDRALKLWGEMKNKGILPSVVTYNSVIGGLCKSGKTE 770
P V+Y LI G F+ + +L EM+ KG+ P+ VTYN V+ K GK +
Sbjct: 181 NLKLLPHVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMD 240
Query: 769 QAMAKLKELLESGLVPDKTTYSTLVHGYCWHGDMDKALEFYNEMVANSFKPDIITRNILL 590
A +L+++ ESG PD T++TL +GYC G + +A +EM K + +T N +L
Sbjct: 241 NAGNELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTIL 300
Query: 589 HGLCSEKMVDKAHKLYNIWLSKGKSVD-------------------------------AI 503
H LC E+ +D A+KL + +G VD I
Sbjct: 301 HTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKVGKSXXWDEMKEKEIIPSII 360
Query: 502 TYNTLIRGLCIEGKIEAALELLTEMQENKLKPDYFTYNALICGLAEAGRIEEAQLFVTKM 323
TY T+I GLC GK + +++ E+ E+ L PD TYN +I G G++++A F KM
Sbjct: 361 TYGTMIGGLCRSGKTDQSIDKCNELLESGLVPDQTTYNTIILGYCREGQVDKAFHFRNKM 420
Query: 322 AEMGKTPD--TCCIAALEKDISQGIQTEKNVE---MLARESPQQDSDSSSIAYSKCIDEL 158
+ PD TC I + +G+ TE ++ L + + ++ ++ I L
Sbjct: 421 VKKSFKPDLFTCNI------LVRGLCTEGMLDKALKLFKTWISKGKAIDAVTFNTIISGL 474
Query: 157 CNAGKFREASATLEEMVQK 101
C G+F EA L EM +K
Sbjct: 475 CEEGRFEEAFDLLAEMEEK 493
Score = 199 bits (506), Expect = 2e-48
Identities = 118/423 (27%), Positives = 211/423 (49%), Gaps = 2/423 (0%)
Frame = -1
Query: 1738 HGCCLKYKFKDAMEFLNKMSEFGCSPDNITYNTILDAFSKRGMLNEARDLLVEMKDKGLR 1559
+GC E +++M G P+ +TYN ++ + K G ++ A + L +M++ G
Sbjct: 196 NGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFS 255
Query: 1558 PDKKTFNTLVSGYCRLGWLKEAAQTVDLMTQANLCPDIWTYNMLLSGFCKVDRMEEAFRF 1379
PD TFNTL +GYC+ G L EA + +D M++ L + T N +L C ++++A++
Sbjct: 256 PDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKL 315
Query: 1378 RGEMESMKVLPDVVTYNTLINGCFVWNDSSGALMLFEEMGKKGVKPNAVTYNVMVKGLCK 1199
D V+Y TLI G F G ++EM +K + P+ +TY M+ GLC+
Sbjct: 316 LSSASKRGYFVDEVSYGTLIMGYF----KVGKSXXWDEMKEKEIIPSIITYGTMIGGLCR 371
Query: 1198 EGKIEEASQSIRKMEENGISPDCVTYNNLMHGCCKEGNMVAAYETMREMLRKGLKMDIFT 1019
GK +++ ++ E+G+ PD TYN ++ G C+EG + A+ +M++K K D+FT
Sbjct: 372 SGKTDQSIDKCNELLESGLVPDQTTYNTIILGYCREGQVDKAFHFRNKMVKKSFKPDLFT 431
Query: 1018 LNTFLHALCKEKKLDVAYELLHN--AKGYDPDEVSYGTLIMGYFKDEDVDRALKLWGEMK 845
N + LC E LD A +L +KG D V++ T+I G ++ + A L EM+
Sbjct: 432 CNILVRGLCTEGMLDKALKLFKTWISKGKAIDAVTFNTIISGLCEEGRFEEAFDLLAEME 491
Query: 844 NKGILPSVVTYNSVIGGLCKSGKTEQAMAKLKELLESGLVPDKTTYSTLVHGYCWHGDMD 665
K + P T+N+++ L +G+ ++A + ++E G + D+T ++
Sbjct: 492 EKKLGPDCYTHNAILSALADAGRMKEAEEFMSGIVEQGKLQDQTI------------SLN 539
Query: 664 KALEFYNEMVANSFKPDIITRNILLHGLCSEKMVDKAHKLYNIWLSKGKSVDAITYNTLI 485
K + + P+ + + ++ LC++ A + KG + TY +L+
Sbjct: 540 KRKTESSSETSQESDPNSVAFSEQINELCTQGKYKDAMHMIQESTQKGIILHKSTYISLM 599
Query: 484 RGL 476
GL
Sbjct: 600 EGL 602
Score = 137 bits (344), Expect = 1e-29
Identities = 97/347 (27%), Positives = 163/347 (46%), Gaps = 7/347 (2%)
Frame = -1
Query: 1054 MLRKGLKMDIFTLNTFLHALCKEKKLDVAYELLHNA-------KGYDPDEVSYGTLIMGY 896
M R LK ++ TLNT + AL + Y L A G + + ++ LI G
Sbjct: 1 MKRLHLKPNLLTLNTLIKALVRYPSKPSVY--LSKAIFSDVIKLGVEVNTNTFNILICGC 58
Query: 895 FKDEDVDRALKLWGEMKNKGILPSVVTYNSVIGGLCKSGKTEQAMAKLKELLESGLVPDK 716
+ + A+ L G+MK+ P V+YN+++ LCK GK +A L ++ +GL P++
Sbjct: 59 CIENKLSEAIGLIGKMKHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNR 118
Query: 715 TTYSTLVHGYCWHGDMDKALEFYNEMVANSFKPDIITRNILLHGLCSEKMVDKAHKLYNI 536
T++ LV GYC G + +A E + M N+ PD+ T L+ GLC + +D+A +L +
Sbjct: 119 NTFNILVSGYCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDE 178
Query: 535 WLSKGKSVDAITYNTLIRGLCIEGKIEAALELLTEMQENKLKPDYFTYNALICGLAEAGR 356
+ +TYN LI G EL+ EM+ +KP+ TYN ++ + G+
Sbjct: 179 MENLKLLPHVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGK 238
Query: 355 IEEAQLFVTKMAEMGKTPDTCCIAALEKDISQGIQTEKNVEMLARESPQQDSDSSSIAYS 176
++ A + KM E G +PD L + + + M+ E ++ +S+ +
Sbjct: 239 MDNAGNELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMM-DEMSRKGLKMNSVTLN 297
Query: 175 KCIDELCNAGKFREASATLEEMVQKGIKVNSSIYISLMHGLIKRQKS 35
+ LC K +A L ++G V+ Y +L+ G K KS
Sbjct: 298 TILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKVGKS 344
Score = 63.9 bits (154), Expect = 1e-07
Identities = 51/203 (25%), Positives = 94/203 (46%), Gaps = 6/203 (2%)
Frame = -1
Query: 622 KPDIITRNILLHGLC---SEKMVDKAHKLYNIWLSKGKSVDAITYNTLIRGLCIEGKIEA 452
KP+++T N L+ L S+ V + +++ + G V+ T+N LI G CIE K+
Sbjct: 7 KPNLLTLNTLIKALVRYPSKPSVYLSKAIFSDVIKLGVEVNTNTFNILICGCCIENKLSE 66
Query: 451 ALELLTEMQENKLKPDYFTYNALICGLAEAGRIEEAQLFVTKMAEMGKTPDTCCIAALEK 272
A+ L+ +M+ PD +YN ++ L + G++ EA+ + M G P+ L
Sbjct: 67 AIGLIGKMKHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNTFNILVS 126
Query: 271 D---ISQGIQTEKNVEMLARESPQQDSDSSSIAYSKCIDELCNAGKFREASATLEEMVQK 101
+ + + ++++AR + D + Y+ I LC GK EA +EM
Sbjct: 127 GYCKLGWLKEAAEVIDIMARNNVLPDVRT----YTTLIGGLCKDGKIDEAFRLRDEMENL 182
Query: 100 GIKVNSSIYISLMHGLIKRQKSI 32
+ + Y L++G + S+
Sbjct: 183 KLLPHVVTYNMLINGCFECSSSL 205