BLASTX nr result

ID: Coptis21_contig00010367 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010367
         (1013 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278944.1| PREDICTED: tRNA (guanosine(18)-2'-O)-methylt...   315   8e-84
emb|CBI22273.3| unnamed protein product [Vitis vinifera]              315   8e-84
ref|XP_002532898.1| rRNA methylase, putative [Ricinus communis] ...   312   9e-83
ref|XP_004136796.1| PREDICTED: tRNA (guanosine(18)-2'-O)-methylt...   308   1e-81
ref|XP_002306029.1| predicted protein [Populus trichocarpa] gi|2...   308   1e-81

>ref|XP_002278944.1| PREDICTED: tRNA (guanosine(18)-2'-O)-methyltransferase-like [Vitis
           vinifera]
          Length = 372

 Score =  315 bits (808), Expect = 8e-84
 Identities = 150/176 (85%), Positives = 166/176 (94%)
 Frame = -2

Query: 529 SEEILEAVDTLILDVRKERIRKVVENRSYSVCLVVEGLTDFGNVSATFRSADALGFQSVH 350
           S EILEA+D  I++VRKER R VV++RSYSVCLVVEGL DFGNVSA FRSADALGFQSVH
Sbjct: 146 SSEILEAMDPYIMEVRKERFRNVVKSRSYSVCLVVEGLCDFGNVSAAFRSADALGFQSVH 205

Query: 349 VISCDSTKRYRDNRHVSMGAEKWLDIEVWNSPQECFRVLRSRGYRIATTHVGIDAVSVYD 170
           V+SCDS+KRY+DNRHVSMGAEKWLDIE+WNS QECF VL+SRGYRIATTHVG+DAVS+YD
Sbjct: 206 VVSCDSSKRYKDNRHVSMGAEKWLDIELWNSTQECFEVLKSRGYRIATTHVGMDAVSIYD 265

Query: 169 MDWSCPTAIVVGNESRGISDEALQLSDLHCSIPMKGMVDSFNVSVAAGIIMHQAVC 2
           MDW+CPTAIVVGNE+RGISDEAL+LSDLHCSIPMKGMVDSFNVSVAAGI+MH AVC
Sbjct: 266 MDWTCPTAIVVGNENRGISDEALELSDLHCSIPMKGMVDSFNVSVAAGILMHHAVC 321


>emb|CBI22273.3| unnamed protein product [Vitis vinifera]
          Length = 369

 Score =  315 bits (808), Expect = 8e-84
 Identities = 150/176 (85%), Positives = 166/176 (94%)
 Frame = -2

Query: 529 SEEILEAVDTLILDVRKERIRKVVENRSYSVCLVVEGLTDFGNVSATFRSADALGFQSVH 350
           S EILEA+D  I++VRKER R VV++RSYSVCLVVEGL DFGNVSA FRSADALGFQSVH
Sbjct: 143 SSEILEAMDPYIMEVRKERFRNVVKSRSYSVCLVVEGLCDFGNVSAAFRSADALGFQSVH 202

Query: 349 VISCDSTKRYRDNRHVSMGAEKWLDIEVWNSPQECFRVLRSRGYRIATTHVGIDAVSVYD 170
           V+SCDS+KRY+DNRHVSMGAEKWLDIE+WNS QECF VL+SRGYRIATTHVG+DAVS+YD
Sbjct: 203 VVSCDSSKRYKDNRHVSMGAEKWLDIELWNSTQECFEVLKSRGYRIATTHVGMDAVSIYD 262

Query: 169 MDWSCPTAIVVGNESRGISDEALQLSDLHCSIPMKGMVDSFNVSVAAGIIMHQAVC 2
           MDW+CPTAIVVGNE+RGISDEAL+LSDLHCSIPMKGMVDSFNVSVAAGI+MH AVC
Sbjct: 263 MDWTCPTAIVVGNENRGISDEALELSDLHCSIPMKGMVDSFNVSVAAGILMHHAVC 318


>ref|XP_002532898.1| rRNA methylase, putative [Ricinus communis]
           gi|223527332|gb|EEF29478.1| rRNA methylase, putative
           [Ricinus communis]
          Length = 334

 Score =  312 bits (799), Expect = 9e-83
 Identities = 149/174 (85%), Positives = 164/174 (94%)
 Frame = -2

Query: 523 EILEAVDTLILDVRKERIRKVVENRSYSVCLVVEGLTDFGNVSATFRSADALGFQSVHVI 344
           E+LEAV   I++ RKER   VV+NRSYSVCLVVEGL+DFGNVSA FRSADALGFQSVHV+
Sbjct: 110 EVLEAVGPYIMEDRKERFANVVKNRSYSVCLVVEGLSDFGNVSAAFRSADALGFQSVHVV 169

Query: 343 SCDSTKRYRDNRHVSMGAEKWLDIEVWNSPQECFRVLRSRGYRIATTHVGIDAVSVYDMD 164
           SCDS+KRYRDNRHVSMGAEKWLDIE+W+S QECF VL+SRGYRIATTHVG+DAVS+YDMD
Sbjct: 170 SCDSSKRYRDNRHVSMGAEKWLDIELWDSTQECFEVLKSRGYRIATTHVGMDAVSIYDMD 229

Query: 163 WSCPTAIVVGNESRGISDEALQLSDLHCSIPMKGMVDSFNVSVAAGIIMHQAVC 2
           WSCPTAIVVGNE+RGISDEAL+LSDLHCSIPMKGMVDSFNVSVAAGI+MHQAVC
Sbjct: 230 WSCPTAIVVGNENRGISDEALELSDLHCSIPMKGMVDSFNVSVAAGILMHQAVC 283


>ref|XP_004136796.1| PREDICTED: tRNA (guanosine(18)-2'-O)-methyltransferase-like
           [Cucumis sativus]
          Length = 370

 Score =  308 bits (790), Expect = 1e-81
 Identities = 147/176 (83%), Positives = 164/176 (93%)
 Frame = -2

Query: 529 SEEILEAVDTLILDVRKERIRKVVENRSYSVCLVVEGLTDFGNVSATFRSADALGFQSVH 350
           S EILEA+D+LILD RKER + VV NRSYSVCLVVEGLTDFGNVSA FRSADALGFQSVH
Sbjct: 141 SGEILEALDSLILDSRKERFKNVVRNRSYSVCLVVEGLTDFGNVSAAFRSADALGFQSVH 200

Query: 349 VISCDSTKRYRDNRHVSMGAEKWLDIEVWNSPQECFRVLRSRGYRIATTHVGIDAVSVYD 170
           V+SCD++KRYR+NRHVSMGAEKWLDIE+WNS  ECF++L+SRGYRI +TH+G +AVSVYD
Sbjct: 201 VVSCDASKRYRENRHVSMGAEKWLDIELWNSTPECFKILKSRGYRIVSTHLGANAVSVYD 260

Query: 169 MDWSCPTAIVVGNESRGISDEALQLSDLHCSIPMKGMVDSFNVSVAAGIIMHQAVC 2
           MDWSCPTAIVVGNESRGIS+EAL+LSDLHCSIPM GMVDSFNVSVAAGI+MH AVC
Sbjct: 261 MDWSCPTAIVVGNESRGISNEALELSDLHCSIPMNGMVDSFNVSVAAGILMHHAVC 316


>ref|XP_002306029.1| predicted protein [Populus trichocarpa] gi|222848993|gb|EEE86540.1|
           predicted protein [Populus trichocarpa]
          Length = 269

 Score =  308 bits (789), Expect = 1e-81
 Identities = 146/176 (82%), Positives = 166/176 (94%)
 Frame = -2

Query: 529 SEEILEAVDTLILDVRKERIRKVVENRSYSVCLVVEGLTDFGNVSATFRSADALGFQSVH 350
           S E+LEAV   +++ RKERIR  V++RSYS+CLVVEGLTDFGNVSA FRSADALGFQSVH
Sbjct: 43  SSEVLEAVGPYMMEERKERIRNTVKSRSYSLCLVVEGLTDFGNVSAVFRSADALGFQSVH 102

Query: 349 VISCDSTKRYRDNRHVSMGAEKWLDIEVWNSPQECFRVLRSRGYRIATTHVGIDAVSVYD 170
           VISCDS+KRY++NRHVSMGAEKWLDIE+W+S ++CF+VL+SRGYRIATTHVGIDAVS+YD
Sbjct: 103 VISCDSSKRYKENRHVSMGAEKWLDIELWDSAKDCFQVLKSRGYRIATTHVGIDAVSIYD 162

Query: 169 MDWSCPTAIVVGNESRGISDEALQLSDLHCSIPMKGMVDSFNVSVAAGIIMHQAVC 2
           MDWSCPTAIVVGNE+RGISDEAL+LSDLHCSIPMKGMVDSFNVSVAAGI+MH AVC
Sbjct: 163 MDWSCPTAIVVGNENRGISDEALELSDLHCSIPMKGMVDSFNVSVAAGILMHHAVC 218


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