BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010354
         (1030 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK36205.1| unknown [Lotus japonicus]                              391   e-106
ref|XP_003519824.1| PREDICTED: signal recognition particle recep...   390   e-106
ref|XP_002265544.2| PREDICTED: signal recognition particle recep...   390   e-106
ref|XP_002525397.1| Signal recognition particle receptor subunit...   390   e-106
ref|XP_003517667.1| PREDICTED: signal recognition particle recep...   388   e-105

>gb|AFK36205.1| unknown [Lotus japonicus]
          Length = 259

 Score =  391 bits (1005), Expect = e-106
 Identities = 188/259 (72%), Positives = 225/259 (86%)
 Frame = +1

Query: 25  MEGAEEIVKKLRELLQQSEKRIREIPQEQLYVAVAVLIATFLFSLLIRLFNRTKSNTIIL 204
           M+  E   ++L  L   +   +R++P EQLY+A A+ + T L  L +RLF R K+NT++L
Sbjct: 1   MQELEHWKEELSRLWLTASDYLRQVPPEQLYIAAAIAVFTTLLLLSLRLFKRAKTNTVVL 60

Query: 205 AGLSGSGKTLLFYQLRDGSSHQGTVTSMDPNEGTFVLHSESAKVGKIKPVHVIDVPGHSR 384
            GL+GSGKT+LFYQLRDGS+HQGTVTSM+PNEGTF+LHSE+ K GK+KPVH++DVPGHSR
Sbjct: 61  TGLTGSGKTVLFYQLRDGSTHQGTVTSMEPNEGTFILHSETTKKGKVKPVHIVDVPGHSR 120

Query: 385 LRTKLDEYLPQAAGLVFVVDALDFLPNCRGAAEYLYDILTKGSVVKKKIPVLILCNKTDK 564
           LR KLDEYLPQAAG+VFVVDA+DFLPNCR A+EYLYDILTKGSVVKKKIP+LILCNKTDK
Sbjct: 121 LRPKLDEYLPQAAGVVFVVDAVDFLPNCRAASEYLYDILTKGSVVKKKIPLLILCNKTDK 180

Query: 565 VTAHTKEFIRKQLEKELDKLRTSRTALSEADITNEFTLGVAGEPFSFPQCHNKVTVAESS 744
           VTAHTKEFIR+QLEKE+DKLR SR+A+S+AD+TNEFTLGV GE FSF QC NKVT A++S
Sbjct: 181 VTAHTKEFIRRQLEKEIDKLRASRSAVSDADVTNEFTLGVPGEAFSFTQCCNKVTTADAS 240

Query: 745 GLTGEISQLEQFIREYVRP 801
           GLTGEISQLE+FIREYV+P
Sbjct: 241 GLTGEISQLEEFIREYVKP 259


>ref|XP_003519824.1| PREDICTED: signal recognition particle receptor subunit beta-like
           [Glycine max]
          Length = 259

 Score =  390 bits (1003), Expect = e-106
 Identities = 192/258 (74%), Positives = 221/258 (85%)
 Frame = +1

Query: 25  MEGAEEIVKKLRELLQQSEKRIREIPQEQLYVAVAVLIATFLFSLLIRLFNRTKSNTIIL 204
           ME  E+  ++L      +  R+RE+P  QLY A A+ I T L  L IRLF R KSNTI+L
Sbjct: 1   MEELEQWKEQLSHFANLALDRLREVPPNQLYAAAAIAIFTTLLLLSIRLFKRAKSNTIVL 60

Query: 205 AGLSGSGKTLLFYQLRDGSSHQGTVTSMDPNEGTFVLHSESAKVGKIKPVHVIDVPGHSR 384
            GLSGSGKT+LFYQLRDGS+HQGTVTSM+PNEGTF+LH+E  + GKIKPVHV+DVPGHSR
Sbjct: 61  TGLSGSGKTVLFYQLRDGSTHQGTVTSMEPNEGTFILHNEKTRKGKIKPVHVVDVPGHSR 120

Query: 385 LRTKLDEYLPQAAGLVFVVDALDFLPNCRGAAEYLYDILTKGSVVKKKIPVLILCNKTDK 564
           LR KLDEYLPQAAG+VFVVDALDFLPNCR A+EYLYD+LTKGSVV+KKIP+LILCNKTDK
Sbjct: 121 LRPKLDEYLPQAAGVVFVVDALDFLPNCRAASEYLYDLLTKGSVVRKKIPMLILCNKTDK 180

Query: 565 VTAHTKEFIRKQLEKELDKLRTSRTALSEADITNEFTLGVAGEPFSFPQCHNKVTVAESS 744
           VTAHTKEFIRKQ+EKE+DKLR SR+A+S ADI NEFTLGV GEPFSF QC NKVT A++S
Sbjct: 181 VTAHTKEFIRKQMEKEIDKLRASRSAISAADIANEFTLGVPGEPFSFTQCSNKVTTADAS 240

Query: 745 GLTGEISQLEQFIREYVR 798
           GLTGEISQLE+FIRE+V+
Sbjct: 241 GLTGEISQLEEFIREHVK 258


>ref|XP_002265544.2| PREDICTED: signal recognition particle receptor subunit beta-like
           [Vitis vinifera] gi|297739076|emb|CBI28565.3| unnamed
           protein product [Vitis vinifera]
          Length = 259

 Score =  390 bits (1003), Expect = e-106
 Identities = 193/259 (74%), Positives = 222/259 (85%)
 Frame = +1

Query: 25  MEGAEEIVKKLRELLQQSEKRIREIPQEQLYVAVAVLIATFLFSLLIRLFNRTKSNTIIL 204
           M+  E+   +L++  +Q  +   ++P+ QLY A+AV+  T  F L IRLF RTKSNT++L
Sbjct: 1   MDELEQWRIQLQQWSRQGAEWFHQMPETQLYAAIAVVFVTTFFLLSIRLFKRTKSNTVVL 60

Query: 205 AGLSGSGKTLLFYQLRDGSSHQGTVTSMDPNEGTFVLHSESAKVGKIKPVHVIDVPGHSR 384
            GLSGSGKT LFYQL+DGSSH GTVTSMDPNEGTFVLHSE AK GKIKPVHV+DVPGHSR
Sbjct: 61  TGLSGSGKTTLFYQLQDGSSHLGTVTSMDPNEGTFVLHSEIAKKGKIKPVHVVDVPGHSR 120

Query: 385 LRTKLDEYLPQAAGLVFVVDALDFLPNCRGAAEYLYDILTKGSVVKKKIPVLILCNKTDK 564
           LR KLDE+LPQAAG+VFVVDAL+FLPNCR A+EYLYDILTK SVVKKKIPVLILCNKTDK
Sbjct: 121 LRPKLDEFLPQAAGIVFVVDALEFLPNCRAASEYLYDILTKSSVVKKKIPVLILCNKTDK 180

Query: 565 VTAHTKEFIRKQLEKELDKLRTSRTALSEADITNEFTLGVAGEPFSFPQCHNKVTVAESS 744
           VTAHTKEFIRKQLEKE++K R SR+A+S AD+ NEFTLGV GE F F QCHNKVTVA++S
Sbjct: 181 VTAHTKEFIRKQLEKEIEKFRASRSAISAADVVNEFTLGVPGEAFGFSQCHNKVTVADAS 240

Query: 745 GLTGEISQLEQFIREYVRP 801
           GLTGEISQLE+FIREYV+P
Sbjct: 241 GLTGEISQLEEFIREYVKP 259


>ref|XP_002525397.1| Signal recognition particle receptor subunit beta, putative
           [Ricinus communis] gi|223535360|gb|EEF37035.1| Signal
           recognition particle receptor subunit beta, putative
           [Ricinus communis]
          Length = 259

 Score =  390 bits (1003), Expect = e-106
 Identities = 192/259 (74%), Positives = 222/259 (85%)
 Frame = +1

Query: 25  MEGAEEIVKKLRELLQQSEKRIREIPQEQLYVAVAVLIATFLFSLLIRLFNRTKSNTIIL 204
           MEG E+   + ++ LQQ  +   +IP  QLY A AVL+ T LF L+IR F RTKSNTI+L
Sbjct: 1   MEGVEQWKNEAKQWLQQGIEFANQIPPAQLYAAAAVLLITTLFLLIIRFFRRTKSNTIVL 60

Query: 205 AGLSGSGKTLLFYQLRDGSSHQGTVTSMDPNEGTFVLHSESAKVGKIKPVHVIDVPGHSR 384
            GLSGSGKT+LFYQLRDGSSHQGTVTSM+ NEGTF+LHSE++K GK+KPVH +DVPGHSR
Sbjct: 61  TGLSGSGKTVLFYQLRDGSSHQGTVTSMEQNEGTFILHSENSKKGKLKPVHFVDVPGHSR 120

Query: 385 LRTKLDEYLPQAAGLVFVVDALDFLPNCRGAAEYLYDILTKGSVVKKKIPVLILCNKTDK 564
           LR+KLDE+LPQAAG+VFVVDAL+FLPN RG +EYLYDILTK SVVK+KIPVLI CNKTDK
Sbjct: 121 LRSKLDEFLPQAAGIVFVVDALEFLPNLRGVSEYLYDILTKASVVKRKIPVLICCNKTDK 180

Query: 565 VTAHTKEFIRKQLEKELDKLRTSRTALSEADITNEFTLGVAGEPFSFPQCHNKVTVAESS 744
           VTAHTKEFIRKQLEKE+DKLR SR+ +SEADI N+FTLG+ GEPFSF  C NKVTVAE S
Sbjct: 181 VTAHTKEFIRKQLEKEIDKLRASRSGISEADIANDFTLGIPGEPFSFSHCSNKVTVAECS 240

Query: 745 GLTGEISQLEQFIREYVRP 801
           GLTGE SQ+EQFIRE+V+P
Sbjct: 241 GLTGETSQVEQFIREHVKP 259


>ref|XP_003517667.1| PREDICTED: signal recognition particle receptor subunit beta-like
           isoform 1 [Glycine max]
          Length = 259

 Score =  388 bits (997), Expect = e-105
 Identities = 190/258 (73%), Positives = 221/258 (85%)
 Frame = +1

Query: 25  MEGAEEIVKKLRELLQQSEKRIREIPQEQLYVAVAVLIATFLFSLLIRLFNRTKSNTIIL 204
           ME  E+  ++L      +  R+ E+P  QLY A A++I T L  L IRLF R KSNT++L
Sbjct: 1   MEELEQWKEQLSHFANLALDRLLEVPPNQLYAAAAIVIFTTLLLLSIRLFKRAKSNTVVL 60

Query: 205 AGLSGSGKTLLFYQLRDGSSHQGTVTSMDPNEGTFVLHSESAKVGKIKPVHVIDVPGHSR 384
           AGLSGSGKT++FYQLRDGS+HQGTVTSM+PNEGTF+LH+E  + GKIKPVHV+DVPGHSR
Sbjct: 61  AGLSGSGKTVIFYQLRDGSTHQGTVTSMEPNEGTFILHNEKTRKGKIKPVHVVDVPGHSR 120

Query: 385 LRTKLDEYLPQAAGLVFVVDALDFLPNCRGAAEYLYDILTKGSVVKKKIPVLILCNKTDK 564
           LR KLDEYLPQAAG+VFVVDALDFLPNCR A+EYLYD+LTKGSVV+KKIPVLILCNKTDK
Sbjct: 121 LRPKLDEYLPQAAGIVFVVDALDFLPNCRAASEYLYDLLTKGSVVRKKIPVLILCNKTDK 180

Query: 565 VTAHTKEFIRKQLEKELDKLRTSRTALSEADITNEFTLGVAGEPFSFPQCHNKVTVAESS 744
           VTAHTKEFIRKQ+EKE+DKLR SR+A+S ADI NEFTLGV GEPF F QC NKVT A++S
Sbjct: 181 VTAHTKEFIRKQMEKEIDKLRASRSAISAADIANEFTLGVPGEPFFFTQCSNKVTTADAS 240

Query: 745 GLTGEISQLEQFIREYVR 798
           GLTGEISQLE+FIRE+V+
Sbjct: 241 GLTGEISQLEEFIREHVK 258