BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010347
         (207 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003549705.1| PREDICTED: 116 kDa U5 small nuclear ribonucl...   125   5e-27
ref|XP_003542669.1| PREDICTED: 116 kDa U5 small nuclear ribonucl...   125   5e-27
emb|CBI25589.3| unnamed protein product [Vitis vinifera]              124   6e-27
ref|XP_002267199.1| PREDICTED: 116 kDa U5 small nuclear ribonucl...   124   6e-27
ref|XP_004139267.1| PREDICTED: 116 kDa U5 small nuclear ribonucl...   123   1e-26

>ref|XP_003549705.1| PREDICTED: 116 kDa U5 small nuclear ribonucleoprotein
           component-like [Glycine max]
          Length = 988

 Score =  125 bits (313), Expect = 5e-27
 Identities = 61/69 (88%), Positives = 63/69 (91%)
 Frame = +1

Query: 1   HAIQERLPIVVVINKVDRLITELKLPPNDAYHKLRHILEVINNHISAASSTAGGIQAIHP 180
           HAIQERLPIVVVINKVDRLITELKLPP DAYHKLRH LEVIN HISAASS AGG+Q + P
Sbjct: 257 HAIQERLPIVVVINKVDRLITELKLPPKDAYHKLRHTLEVINTHISAASSIAGGVQVVDP 316

Query: 181 VAGNVCFAS 207
           VAGNVCFAS
Sbjct: 317 VAGNVCFAS 325


>ref|XP_003542669.1| PREDICTED: 116 kDa U5 small nuclear ribonucleoprotein
           component-like [Glycine max]
          Length = 986

 Score =  125 bits (313), Expect = 5e-27
 Identities = 61/69 (88%), Positives = 63/69 (91%)
 Frame = +1

Query: 1   HAIQERLPIVVVINKVDRLITELKLPPNDAYHKLRHILEVINNHISAASSTAGGIQAIHP 180
           HAIQERLPIVVVINKVDRLITELKLPP DAYHKLRH LEVIN HISAASS AGG+Q + P
Sbjct: 255 HAIQERLPIVVVINKVDRLITELKLPPKDAYHKLRHTLEVINTHISAASSIAGGVQVVDP 314

Query: 181 VAGNVCFAS 207
           VAGNVCFAS
Sbjct: 315 VAGNVCFAS 323


>emb|CBI25589.3| unnamed protein product [Vitis vinifera]
          Length = 931

 Score =  124 bits (312), Expect = 6e-27
 Identities = 61/69 (88%), Positives = 63/69 (91%)
 Frame = +1

Query: 1   HAIQERLPIVVVINKVDRLITELKLPPNDAYHKLRHILEVINNHISAASSTAGGIQAIHP 180
           HAIQERLPIVVVINKVDRLITELKLPP DAYHKLRH LE+INNHISAASSTAG +Q I P
Sbjct: 200 HAIQERLPIVVVINKVDRLITELKLPPKDAYHKLRHTLELINNHISAASSTAGNVQIIDP 259

Query: 181 VAGNVCFAS 207
            AGNVCFAS
Sbjct: 260 AAGNVCFAS 268


>ref|XP_002267199.1| PREDICTED: 116 kDa U5 small nuclear ribonucleoprotein component
           [Vitis vinifera] gi|147858113|emb|CAN81413.1|
           hypothetical protein VITISV_031170 [Vitis vinifera]
          Length = 988

 Score =  124 bits (312), Expect = 6e-27
 Identities = 61/69 (88%), Positives = 63/69 (91%)
 Frame = +1

Query: 1   HAIQERLPIVVVINKVDRLITELKLPPNDAYHKLRHILEVINNHISAASSTAGGIQAIHP 180
           HAIQERLPIVVVINKVDRLITELKLPP DAYHKLRH LE+INNHISAASSTAG +Q I P
Sbjct: 257 HAIQERLPIVVVINKVDRLITELKLPPKDAYHKLRHTLELINNHISAASSTAGNVQIIDP 316

Query: 181 VAGNVCFAS 207
            AGNVCFAS
Sbjct: 317 AAGNVCFAS 325


>ref|XP_004139267.1| PREDICTED: 116 kDa U5 small nuclear ribonucleoprotein
           component-like [Cucumis sativus]
           gi|449493675|ref|XP_004159406.1| PREDICTED: 116 kDa U5
           small nuclear ribonucleoprotein component-like [Cucumis
           sativus]
          Length = 988

 Score =  123 bits (309), Expect = 1e-26
 Identities = 60/69 (86%), Positives = 63/69 (91%)
 Frame = +1

Query: 1   HAIQERLPIVVVINKVDRLITELKLPPNDAYHKLRHILEVINNHISAASSTAGGIQAIHP 180
           HAIQERLPIVVVINKVDRLITELKLPP DAY+KLRH LE+INNHISAASSTAG +Q I P
Sbjct: 257 HAIQERLPIVVVINKVDRLITELKLPPRDAYYKLRHTLEIINNHISAASSTAGNVQVIDP 316

Query: 181 VAGNVCFAS 207
            AGNVCFAS
Sbjct: 317 AAGNVCFAS 325