BLASTX nr result

ID: Coptis21_contig00010344 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010344
         (1747 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271627.2| PREDICTED: uncharacterized protein LOC100243...   140   1e-30
emb|CBI36980.3| unnamed protein product [Vitis vinifera]              140   1e-30
emb|CAN64022.1| hypothetical protein VITISV_005264 [Vitis vinifera]   140   1e-30
ref|XP_002302785.1| predicted protein [Populus trichocarpa] gi|2...   126   2e-26
ref|XP_002538760.1| hypothetical protein RCOM_2139380 [Ricinus c...   125   4e-26

>ref|XP_002271627.2| PREDICTED: uncharacterized protein LOC100243428 [Vitis vinifera]
          Length = 1214

 Score =  140 bits (352), Expect = 1e-30
 Identities = 75/191 (39%), Positives = 123/191 (64%)
 Frame = -2

Query: 660  TGNQCYKAIEDVEKETVPQAFLVDHTSDEVTFENGSLPFTKNYPLWGNVESMEVFRLMPQ 481
            T NQ  +A E      V Q+  +D T + +   N SLPF K+ P+W  +E++EVF+ MPQ
Sbjct: 993  TVNQWNEARE--RPSEVTQSPRIDPTGEIMLDLNQSLPFVKSSPIWNTLETLEVFQRMPQ 1050

Query: 480  HPHFRPLQQLNELLREGQALGYMLSFANVIDKVSKAQLDEPYSTFENELEALIELETNGF 301
             PHFRPL+   E  REG A+G M++F+ +I+KV+K + D+P S F + LEAL+ELE +GF
Sbjct: 1051 KPHFRPLENCKEERREGLAIGNMVTFSTLIEKVAKLRFDDPRSIFGSSLEALVELEMHGF 1110

Query: 300  NVHPVRARIKKLLRIKDTRARLHEEFEQVKGQIGKEEKEESIILVVDEIDEKLRELQQSV 121
            +  PV++RI +L+ IKD + +L    ++V+ QI +   E++      +IDE++ E+ + +
Sbjct: 1111 DTKPVQSRINELVFIKDQQEQLKGRTKEVENQIMEHTHEKT------KIDEEIYEIDKKM 1164

Query: 120  VEIMKQRQMVV 88
            +E+ ++R + V
Sbjct: 1165 IELQEKRALAV 1175


>emb|CBI36980.3| unnamed protein product [Vitis vinifera]
          Length = 1074

 Score =  140 bits (352), Expect = 1e-30
 Identities = 75/191 (39%), Positives = 123/191 (64%)
 Frame = -2

Query: 660  TGNQCYKAIEDVEKETVPQAFLVDHTSDEVTFENGSLPFTKNYPLWGNVESMEVFRLMPQ 481
            T NQ  +A E      V Q+  +D T + +   N SLPF K+ P+W  +E++EVF+ MPQ
Sbjct: 853  TVNQWNEARE--RPSEVTQSPRIDPTGEIMLDLNQSLPFVKSSPIWNTLETLEVFQRMPQ 910

Query: 480  HPHFRPLQQLNELLREGQALGYMLSFANVIDKVSKAQLDEPYSTFENELEALIELETNGF 301
             PHFRPL+   E  REG A+G M++F+ +I+KV+K + D+P S F + LEAL+ELE +GF
Sbjct: 911  KPHFRPLENCKEERREGLAIGNMVTFSTLIEKVAKLRFDDPRSIFGSSLEALVELEMHGF 970

Query: 300  NVHPVRARIKKLLRIKDTRARLHEEFEQVKGQIGKEEKEESIILVVDEIDEKLRELQQSV 121
            +  PV++RI +L+ IKD + +L    ++V+ QI +   E++      +IDE++ E+ + +
Sbjct: 971  DTKPVQSRINELVFIKDQQEQLKGRTKEVENQIMEHTHEKT------KIDEEIYEIDKKM 1024

Query: 120  VEIMKQRQMVV 88
            +E+ ++R + V
Sbjct: 1025 IELQEKRALAV 1035


>emb|CAN64022.1| hypothetical protein VITISV_005264 [Vitis vinifera]
          Length = 1348

 Score =  140 bits (352), Expect = 1e-30
 Identities = 75/191 (39%), Positives = 123/191 (64%)
 Frame = -2

Query: 660  TGNQCYKAIEDVEKETVPQAFLVDHTSDEVTFENGSLPFTKNYPLWGNVESMEVFRLMPQ 481
            T NQ  +A E      V Q+  +D T + +   N SLPF K+ P+W  +E++EVF+ MPQ
Sbjct: 975  TVNQWNEARE--RPSEVTQSPRIDPTGEIMLDLNQSLPFVKSSPIWNTLETLEVFQRMPQ 1032

Query: 480  HPHFRPLQQLNELLREGQALGYMLSFANVIDKVSKAQLDEPYSTFENELEALIELETNGF 301
             PHFRPL+   E  REG A+G M++F+ +I+KV+K + D+P S F + LEAL+ELE +GF
Sbjct: 1033 KPHFRPLENCKEERREGLAIGNMVTFSTLIEKVAKLRFDDPRSIFGSSLEALVELEMHGF 1092

Query: 300  NVHPVRARIKKLLRIKDTRARLHEEFEQVKGQIGKEEKEESIILVVDEIDEKLRELQQSV 121
            +  PV++RI +L+ IKD + +L    ++V+ QI +   E++      +IDE++ E+ + +
Sbjct: 1093 DTKPVQSRINELVFIKDQQEQLKGRTKEVENQIMEHTHEKT------KIDEEIYEIDKKM 1146

Query: 120  VEIMKQRQMVV 88
            +E+ ++R + V
Sbjct: 1147 IELQEKRALAV 1157


>ref|XP_002302785.1| predicted protein [Populus trichocarpa] gi|222844511|gb|EEE82058.1|
            predicted protein [Populus trichocarpa]
          Length = 919

 Score =  126 bits (316), Expect = 2e-26
 Identities = 72/212 (33%), Positives = 121/212 (57%), Gaps = 4/212 (1%)
 Frame = -2

Query: 660  TGNQCYKAIEDVEKETVP-QAFLVDHTSDEVTFENGSLPFTKNYPLWGNVESMEVFRLMP 484
            TG       E  EK+ V  Q+  VD  S++   EN  +PF K  P+W  +ESMEVF+++P
Sbjct: 692  TGRIASGVSEAREKKVVAVQSCTVDPKSNDTMVENQLVPFVKKSPVWNTIESMEVFQIIP 751

Query: 483  QHPHFRPLQQLNELLREGQALGYMLSFANVIDKVSKAQLDEPYSTFENELEALIELETNG 304
            Q PHF PL +  E  REG A+G M++FA++ +K+S  Q D+  S  E+ LE+L++LE +G
Sbjct: 752  QKPHFHPLTECKEEYREGSAIGIMVTFASLFEKISSLQFDDCRSILESTLESLVDLEKHG 811

Query: 303  FNVHPVRARIKKLLRIKDTRARLHEEFEQVKGQIGKEEKEESIILVVDE---IDEKLREL 133
            F++   R R+ +LL IKD +  +  E          ++ EE I +  DE   ++EK+ ++
Sbjct: 812  FDITVPRCRLNELLSIKDGQGEVINE---------SKDAEEKIRVHTDEKRKLEEKMSDI 862

Query: 132  QQSVVEIMKQRQMVV*VFTRLRIDGT*LDFCR 37
            ++ + E+ ++  +     T+ ++D   LD  +
Sbjct: 863  EKKITELQEELAL-----TKAKMDVKGLDISK 889


>ref|XP_002538760.1| hypothetical protein RCOM_2139380 [Ricinus communis]
           gi|223510536|gb|EEF23623.1| hypothetical protein
           RCOM_2139380 [Ricinus communis]
          Length = 201

 Score =  125 bits (314), Expect = 4e-26
 Identities = 72/184 (39%), Positives = 115/184 (62%), Gaps = 8/184 (4%)
 Frame = -2

Query: 618 ETVPQAFLVDHTSDEVTFENGSLPFTKNYPLWGNVESMEVFRLMPQHPHFRPLQQLNELL 439
           E   Q+ +++        EN  +PF K+  +W N+ES+EVF+++PQ PHF PL    E  
Sbjct: 7   ENFKQSSVINVPEATELVENLEMPFLKSSLIWKNIESLEVFQVLPQKPHFSPLIGHKEAS 66

Query: 438 REGQALGYMLSFANVIDKVSKAQLDEPYSTFENELEALIELETNGFNVHPVRARIKKLLR 259
           REG A+G+MLSFA +I+K+SK Q+D+    FE+ +E L ELE +GF V  +  R++KLL 
Sbjct: 67  REGMAMGHMLSFAVLIEKMSKLQVDDGREVFESYMEVLAELEMHGFEVKAIAERLEKLLS 126

Query: 258 IKDTRARLHEEFEQVKGQIGKEE-KEESIILV--VDEIDEKLRELQQS-----VVEIMKQ 103
           IKD   RL +E ++V   IG  E K E I L   +D+I++++R+L++       +++MK 
Sbjct: 127 IKDRCKRLEDEAKKV--HIGMAEGKNEKIKLEEDIDKIEKRIRQLEEQRAMKVSMKMMKD 184

Query: 102 RQMV 91
            +++
Sbjct: 185 SELI 188


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