BLASTX nr result

ID: Coptis21_contig00010342 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010342
         (245 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279879.1| PREDICTED: cell number regulator 8-like [Vit...   116   2e-24
ref|XP_002879652.1| hypothetical protein ARALYDRAFT_902846 [Arab...   115   3e-24
gb|AAM61533.1| unknown [Arabidopsis thaliana]                         115   3e-24
ref|NP_565858.1| PLAC8 domain-containing protein [Arabidopsis th...   115   3e-24
ref|XP_002525168.1| conserved hypothetical protein [Ricinus comm...   108   4e-22

>ref|XP_002279879.1| PREDICTED: cell number regulator 8-like [Vitis vinifera]
          Length = 240

 Score =  116 bits (290), Expect = 2e-24
 Identities = 56/70 (80%), Positives = 60/70 (85%), Gaps = 1/70 (1%)
 Frame = -1

Query: 209 WTVDGLPIG-ASVVGEPVGPRRAQWNSGLFACLGRNDEFCSSDLEVCLLGSFAPCVLYGG 33
           WT DGLP+G  SVVGEP+   R QW+S LFACLGRNDEFCSSDLEVCLLGS APCVLYGG
Sbjct: 49  WTADGLPLGHGSVVGEPM--ERTQWDSSLFACLGRNDEFCSSDLEVCLLGSMAPCVLYGG 106

Query: 32  NAERLGSDSG 3
           NAERLGS +G
Sbjct: 107 NAERLGSGAG 116


>ref|XP_002879652.1| hypothetical protein ARALYDRAFT_902846 [Arabidopsis lyrata subsp.
           lyrata] gi|297325491|gb|EFH55911.1| hypothetical protein
           ARALYDRAFT_902846 [Arabidopsis lyrata subsp. lyrata]
          Length = 242

 Score =  115 bits (289), Expect = 3e-24
 Identities = 57/74 (77%), Positives = 60/74 (81%), Gaps = 1/74 (1%)
 Frame = -1

Query: 221 EEDQWTVDGLPIG-ASVVGEPVGPRRAQWNSGLFACLGRNDEFCSSDLEVCLLGSFAPCV 45
           EE  WT DGLP+   SV+GEP+  RR QWNSGLF CLGRNDEFCSSDLEVCLLGS APCV
Sbjct: 49  EEYGWTADGLPVSQGSVIGEPI--RRNQWNSGLFTCLGRNDEFCSSDLEVCLLGSVAPCV 106

Query: 44  LYGGNAERLGSDSG 3
           LYG NAERLGS  G
Sbjct: 107 LYGTNAERLGSAPG 120


>gb|AAM61533.1| unknown [Arabidopsis thaliana]
          Length = 242

 Score =  115 bits (289), Expect = 3e-24
 Identities = 57/74 (77%), Positives = 60/74 (81%), Gaps = 1/74 (1%)
 Frame = -1

Query: 221 EEDQWTVDGLPIG-ASVVGEPVGPRRAQWNSGLFACLGRNDEFCSSDLEVCLLGSFAPCV 45
           EE  WT DGLP+   SV+GEP+  RR QWNSGLF CLGRNDEFCSSDLEVCLLGS APCV
Sbjct: 49  EEYGWTADGLPVSHGSVIGEPI--RRNQWNSGLFTCLGRNDEFCSSDLEVCLLGSVAPCV 106

Query: 44  LYGGNAERLGSDSG 3
           LYG NAERLGS  G
Sbjct: 107 LYGTNAERLGSAPG 120


>ref|NP_565858.1| PLAC8 domain-containing protein [Arabidopsis thaliana]
           gi|4371290|gb|AAD18148.1| expressed protein [Arabidopsis
           thaliana] gi|87116566|gb|ABD19647.1| At2g37110
           [Arabidopsis thaliana] gi|110740715|dbj|BAE98458.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|330254258|gb|AEC09352.1| PLAC8 domain-containing
           protein [Arabidopsis thaliana]
          Length = 242

 Score =  115 bits (289), Expect = 3e-24
 Identities = 57/74 (77%), Positives = 60/74 (81%), Gaps = 1/74 (1%)
 Frame = -1

Query: 221 EEDQWTVDGLPIG-ASVVGEPVGPRRAQWNSGLFACLGRNDEFCSSDLEVCLLGSFAPCV 45
           EE  WT DGLP+   SV+GEP+  RR QWNSGLF CLGRNDEFCSSDLEVCLLGS APCV
Sbjct: 49  EEYGWTADGLPVSHGSVIGEPI--RRNQWNSGLFTCLGRNDEFCSSDLEVCLLGSVAPCV 106

Query: 44  LYGGNAERLGSDSG 3
           LYG NAERLGS  G
Sbjct: 107 LYGTNAERLGSAPG 120


>ref|XP_002525168.1| conserved hypothetical protein [Ricinus communis]
           gi|223535465|gb|EEF37134.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 247

 Score =  108 bits (270), Expect = 4e-22
 Identities = 53/70 (75%), Positives = 58/70 (82%), Gaps = 1/70 (1%)
 Frame = -1

Query: 209 WTVDGLPIG-ASVVGEPVGPRRAQWNSGLFACLGRNDEFCSSDLEVCLLGSFAPCVLYGG 33
           WT +GLP+   SVVGEP+G  RAQW+S + ACLGRNDEFCSSDLEVCLLGS APCVLYG 
Sbjct: 57  WTANGLPLSHGSVVGEPMG--RAQWDSSICACLGRNDEFCSSDLEVCLLGSVAPCVLYGS 114

Query: 32  NAERLGSDSG 3
           NAERLGS  G
Sbjct: 115 NAERLGSTPG 124


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