BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010334
         (1742 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32131.3| unnamed protein product [Vitis vinifera]              605   e-170
ref|XP_002263653.1| PREDICTED: U4/U6 small nuclear ribonucleopro...   605   e-170
gb|ABN06098.1| Pre-mRNA processing ribonucleoprotein, binding re...   581   e-163
ref|XP_002446918.1| hypothetical protein SORBIDRAFT_06g024840 [S...   568   e-159
ref|NP_001132587.1| hypothetical protein [Zea mays] gi|194694828...   568   e-159

>emb|CBI32131.3| unnamed protein product [Vitis vinifera]
          Length = 523

 Score =  605 bits (1560), Expect = e-170
 Identities = 323/439 (73%), Positives = 343/439 (78%), Gaps = 1/439 (0%)
 Frame = +1

Query: 175  LNYDDLDSVSKLQKTQRYVDIMQKVDDALQKGN-MSNQGLVLEDDPEYQLIVDCNALSVD 351
            LNYDDLDSVSKLQKTQRY+DIMQKV+DAL+KG+ MSN G+VLEDDPEYQLIVDCNALSVD
Sbjct: 85   LNYDDLDSVSKLQKTQRYIDIMQKVEDALEKGSDMSNHGIVLEDDPEYQLIVDCNALSVD 144

Query: 352  IENEIVIVHNFVRDNYRLKFPELESLVHHPIDYARVVKKIGNETDLTLVDLEGLLPSAII 531
            IENEIVI+HNF+RDNYRLKFPELESLVHHPIDYARVVKKIGNE DLTLVDLEGLLPSAII
Sbjct: 145  IENEIVIIHNFIRDNYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAII 204

Query: 532  MVVSVTASTTSGKPLPEENLKKTXXXXXXXXXXXXXXXXXXXFVESRMGYISPNLSAIVG 711
            MVVSVTASTTSGKPLPEENLKKT                   FVESRMGYI+PNLSAIVG
Sbjct: 205  MVVSVTASTTSGKPLPEENLKKTVDACDRALALDLAKKKVLDFVESRMGYIAPNLSAIVG 264

Query: 712  SAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKTLAGFSTASSHMHVGFLEQTEIFQSTP 891
            SAVAAKLMGTAGGL+ALAKMPACNVQLLGAKKK LAGFSTA+S   VG++EQTEIFQSTP
Sbjct: 265  SAVAAKLMGTAGGLTALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTP 324

Query: 892  PSLRMRACRLLAAKSTLAARVDSIRGDPTGKNGRNLRDEILKKIEKWQEXXXXXXXXXXX 1071
            PSLRMRACRLLAAKSTL+ARVDS RGDPTGK GR LR+EILKKIEKWQE           
Sbjct: 325  PSLRMRACRLLAAKSTLSARVDSTRGDPTGKTGRTLREEILKKIEKWQEPPPAKQPKPLP 384

Query: 1072 XXDSEPXXXXXXXXXXXXXXXYAVTDMRKLANRMQFGIPEESSXXXXXXXXXXXXXXXXS 1251
              DSEP               YA+TDMRKLANRMQFG+PEESS                +
Sbjct: 385  VPDSEPKKKRGGRRLRKMKERYAITDMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGN 444

Query: 1252 GKLRVSIGQSRLAAKVAXXXXXXXXXXXXXXXXXXXXXXFTPVQGIELSNPQALANQLGS 1431
            GKLRVS+GQS+LAAKVA                      FTPVQGIELSNPQA ANQLGS
Sbjct: 445  GKLRVSVGQSKLAAKVAKKFKEKQYGSSGATSGLTSSLAFTPVQGIELSNPQAHANQLGS 504

Query: 1432 GTQSTYFSEIGTFSKIKKT 1488
            GTQSTYFSEIGTFSKIK+T
Sbjct: 505  GTQSTYFSEIGTFSKIKRT 523


>ref|XP_002263653.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp31-like [Vitis
            vinifera]
          Length = 489

 Score =  605 bits (1560), Expect = e-170
 Identities = 323/439 (73%), Positives = 343/439 (78%), Gaps = 1/439 (0%)
 Frame = +1

Query: 175  LNYDDLDSVSKLQKTQRYVDIMQKVDDALQKGN-MSNQGLVLEDDPEYQLIVDCNALSVD 351
            LNYDDLDSVSKLQKTQRY+DIMQKV+DAL+KG+ MSN G+VLEDDPEYQLIVDCNALSVD
Sbjct: 51   LNYDDLDSVSKLQKTQRYIDIMQKVEDALEKGSDMSNHGIVLEDDPEYQLIVDCNALSVD 110

Query: 352  IENEIVIVHNFVRDNYRLKFPELESLVHHPIDYARVVKKIGNETDLTLVDLEGLLPSAII 531
            IENEIVI+HNF+RDNYRLKFPELESLVHHPIDYARVVKKIGNE DLTLVDLEGLLPSAII
Sbjct: 111  IENEIVIIHNFIRDNYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAII 170

Query: 532  MVVSVTASTTSGKPLPEENLKKTXXXXXXXXXXXXXXXXXXXFVESRMGYISPNLSAIVG 711
            MVVSVTASTTSGKPLPEENLKKT                   FVESRMGYI+PNLSAIVG
Sbjct: 171  MVVSVTASTTSGKPLPEENLKKTVDACDRALALDLAKKKVLDFVESRMGYIAPNLSAIVG 230

Query: 712  SAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKTLAGFSTASSHMHVGFLEQTEIFQSTP 891
            SAVAAKLMGTAGGL+ALAKMPACNVQLLGAKKK LAGFSTA+S   VG++EQTEIFQSTP
Sbjct: 231  SAVAAKLMGTAGGLTALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTP 290

Query: 892  PSLRMRACRLLAAKSTLAARVDSIRGDPTGKNGRNLRDEILKKIEKWQEXXXXXXXXXXX 1071
            PSLRMRACRLLAAKSTL+ARVDS RGDPTGK GR LR+EILKKIEKWQE           
Sbjct: 291  PSLRMRACRLLAAKSTLSARVDSTRGDPTGKTGRTLREEILKKIEKWQEPPPAKQPKPLP 350

Query: 1072 XXDSEPXXXXXXXXXXXXXXXYAVTDMRKLANRMQFGIPEESSXXXXXXXXXXXXXXXXS 1251
              DSEP               YA+TDMRKLANRMQFG+PEESS                +
Sbjct: 351  VPDSEPKKKRGGRRLRKMKERYAITDMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGN 410

Query: 1252 GKLRVSIGQSRLAAKVAXXXXXXXXXXXXXXXXXXXXXXFTPVQGIELSNPQALANQLGS 1431
            GKLRVS+GQS+LAAKVA                      FTPVQGIELSNPQA ANQLGS
Sbjct: 411  GKLRVSVGQSKLAAKVAKKFKEKQYGSSGATSGLTSSLAFTPVQGIELSNPQAHANQLGS 470

Query: 1432 GTQSTYFSEIGTFSKIKKT 1488
            GTQSTYFSEIGTFSKIK+T
Sbjct: 471  GTQSTYFSEIGTFSKIKRT 489


>gb|ABN06098.1| Pre-mRNA processing ribonucleoprotein, binding region; NOSIC
            [Medicago truncatula]
          Length = 484

 Score =  581 bits (1498), Expect = e-163
 Identities = 311/437 (71%), Positives = 336/437 (76%)
 Frame = +1

Query: 175  LNYDDLDSVSKLQKTQRYVDIMQKVDDALQKGNMSNQGLVLEDDPEYQLIVDCNALSVDI 354
            LNYDDLDSVSKLQ+TQRYVD+MQKV++AL+KG+  +QGL LEDDPEYQLIV+CNALSVDI
Sbjct: 47   LNYDDLDSVSKLQQTQRYVDVMQKVEEALKKGSDVSQGLDLEDDPEYQLIVECNALSVDI 106

Query: 355  ENEIVIVHNFVRDNYRLKFPELESLVHHPIDYARVVKKIGNETDLTLVDLEGLLPSAIIM 534
            ENEIVI+HNF+RD YRLKFPELESLVHHPIDYARVVKKIGNE DLTLVDLEGLLPSAIIM
Sbjct: 107  ENEIVIIHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAIIM 166

Query: 535  VVSVTASTTSGKPLPEENLKKTXXXXXXXXXXXXXXXXXXXFVESRMGYISPNLSAIVGS 714
            VVSVTASTT+GKPLPEE L KT                   FVESRMGYI+PN+SAIVGS
Sbjct: 167  VVSVTASTTTGKPLPEEVLSKTIEACDRALALDSAKKKVLDFVESRMGYIAPNVSAIVGS 226

Query: 715  AVAAKLMGTAGGLSALAKMPACNVQLLGAKKKTLAGFSTASSHMHVGFLEQTEIFQSTPP 894
            AVAAKLMGTAGGLSALAKMPACNVQLLGAKKK LAGFSTA+S  HVG++EQTEIFQ+TPP
Sbjct: 227  AVAAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAGFSTATSQFHVGYIEQTEIFQTTPP 286

Query: 895  SLRMRACRLLAAKSTLAARVDSIRGDPTGKNGRNLRDEILKKIEKWQEXXXXXXXXXXXX 1074
            S RMRACRL+AAKSTLAARVDSIRGDP+GK GR+L+DEI KKIEKWQE            
Sbjct: 287  SFRMRACRLVAAKSTLAARVDSIRGDPSGKTGRSLKDEIHKKIEKWQEPPPAKQPKPLPV 346

Query: 1075 XDSEPXXXXXXXXXXXXXXXYAVTDMRKLANRMQFGIPEESSXXXXXXXXXXXXXXXXSG 1254
             DSEP               YA+TDMRKLANRMQFGIPEESS                SG
Sbjct: 347  PDSEPKKKRGGRRLRKMKERYAITDMRKLANRMQFGIPEESSLGDGLGEGYGMLGQAGSG 406

Query: 1255 KLRVSIGQSRLAAKVAXXXXXXXXXXXXXXXXXXXXXXFTPVQGIELSNPQALANQLGSG 1434
            KLRVS GQS+LAAKVA                      FTPVQGIELSNPQA A+QLGSG
Sbjct: 407  KLRVSAGQSKLAAKVAKKFKEKSYGSSGATSGLTSSLAFTPVQGIELSNPQAHAHQLGSG 466

Query: 1435 TQSTYFSEIGTFSKIKK 1485
            TQSTYFSE GTFSKI+K
Sbjct: 467  TQSTYFSETGTFSKIQK 483


>ref|XP_002446918.1| hypothetical protein SORBIDRAFT_06g024840 [Sorghum bicolor]
            gi|241938101|gb|EES11246.1| hypothetical protein
            SORBIDRAFT_06g024840 [Sorghum bicolor]
          Length = 484

 Score =  568 bits (1464), Expect = e-159
 Identities = 306/440 (69%), Positives = 330/440 (75%), Gaps = 1/440 (0%)
 Frame = +1

Query: 172  TLNYDDLDSVSKLQKTQRYVDIMQKVDDALQKG-NMSNQGLVLEDDPEYQLIVDCNALSV 348
            +LNYDDLDSVSKLQKTQRY DIMQKV+ ALQKG + S+QG +LE+DPEYQLIVDCNALSV
Sbjct: 44   SLNYDDLDSVSKLQKTQRYHDIMQKVEVALQKGTDFSSQGFILEEDPEYQLIVDCNALSV 103

Query: 349  DIENEIVIVHNFVRDNYRLKFPELESLVHHPIDYARVVKKIGNETDLTLVDLEGLLPSAI 528
            DIENEI+I+HNF+RD YRLKFPELESLVHHPIDYARVVKKIGNE DLTLVDLEGLLPSAI
Sbjct: 104  DIENEIIIIHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAI 163

Query: 529  IMVVSVTASTTSGKPLPEENLKKTXXXXXXXXXXXXXXXXXXXFVESRMGYISPNLSAIV 708
            IMVVSVTASTTSGKPL E+NL+KT                   FVESRMGY++PNLSAIV
Sbjct: 164  IMVVSVTASTTSGKPLSEDNLEKTTEACDRALTLDAAKKKVLDFVESRMGYLAPNLSAIV 223

Query: 709  GSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKTLAGFSTASSHMHVGFLEQTEIFQST 888
            GSAVA+KLMGTAGGL ALAKMPACNVQLLGAK+K LAGFSTASS   VG+LEQTE+FQST
Sbjct: 224  GSAVASKLMGTAGGLGALAKMPACNVQLLGAKRKNLAGFSTASSQFRVGYLEQTEVFQST 283

Query: 889  PPSLRMRACRLLAAKSTLAARVDSIRGDPTGKNGRNLRDEILKKIEKWQEXXXXXXXXXX 1068
            PP+LR RACRL+AAKSTLAAR+DSIRGDPTGK GRNL +EI KKIEKWQE          
Sbjct: 284  PPALRTRACRLIAAKSTLAARIDSIRGDPTGKAGRNLLEEIRKKIEKWQEPPPAKLPKPL 343

Query: 1069 XXXDSEPXXXXXXXXXXXXXXXYAVTDMRKLANRMQFGIPEESSXXXXXXXXXXXXXXXX 1248
               DSEP               YA TDM KLANRMQFGIPEESS                
Sbjct: 344  PVPDSEPKKKRGGRRLRKMKERYAQTDMMKLANRMQFGIPEESSLGDGLGEGYGMLGQAG 403

Query: 1249 SGKLRVSIGQSRLAAKVAXXXXXXXXXXXXXXXXXXXXXXFTPVQGIELSNPQALANQLG 1428
            SGKLRVS GQS+LAAKVA                      FTPVQGIELSNPQA  N LG
Sbjct: 404  SGKLRVSAGQSKLAAKVAKKFKEKSYGSSGATSGLTSSLAFTPVQGIELSNPQAQGNLLG 463

Query: 1429 SGTQSTYFSEIGTFSKIKKT 1488
             GTQSTYFSE GTFSKI++T
Sbjct: 464  GGTQSTYFSETGTFSKIRRT 483


>ref|NP_001132587.1| hypothetical protein [Zea mays] gi|194694828|gb|ACF81498.1| unknown
            [Zea mays] gi|414585941|tpg|DAA36512.1| TPA: hypothetical
            protein ZEAMMB73_628259 [Zea mays]
            gi|414585942|tpg|DAA36513.1| TPA: hypothetical protein
            ZEAMMB73_628259 [Zea mays]
          Length = 485

 Score =  568 bits (1464), Expect = e-159
 Identities = 306/440 (69%), Positives = 329/440 (74%), Gaps = 1/440 (0%)
 Frame = +1

Query: 172  TLNYDDLDSVSKLQKTQRYVDIMQKVDDALQKG-NMSNQGLVLEDDPEYQLIVDCNALSV 348
            +LNYDDLDSVSKLQKTQRY DIMQKV++ALQKG + SNQG +LE+DPEYQLIVDCNALSV
Sbjct: 45   SLNYDDLDSVSKLQKTQRYNDIMQKVENALQKGTDFSNQGSILEEDPEYQLIVDCNALSV 104

Query: 349  DIENEIVIVHNFVRDNYRLKFPELESLVHHPIDYARVVKKIGNETDLTLVDLEGLLPSAI 528
            DIENEI+I+HNF+RD YRLKFPELESLVHHPIDYARVVKKIGNE DLTLVDLEGLLPSAI
Sbjct: 105  DIENEIIIIHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAI 164

Query: 529  IMVVSVTASTTSGKPLPEENLKKTXXXXXXXXXXXXXXXXXXXFVESRMGYISPNLSAIV 708
            IMVVSVTASTTSGKPL E+NL+KT                   FVESRMGYI+PNLSAIV
Sbjct: 165  IMVVSVTASTTSGKPLSEDNLEKTTEACDRALTLDASKKKVLDFVESRMGYIAPNLSAIV 224

Query: 709  GSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKTLAGFSTASSHMHVGFLEQTEIFQST 888
            GSAVA+KLMGTAGGL ALAKMPACNVQLLGAK+K LAGFSTA+S   VG+LEQTE+FQST
Sbjct: 225  GSAVASKLMGTAGGLGALAKMPACNVQLLGAKRKNLAGFSTATSQFRVGYLEQTEVFQST 284

Query: 889  PPSLRMRACRLLAAKSTLAARVDSIRGDPTGKNGRNLRDEILKKIEKWQEXXXXXXXXXX 1068
            PP LR RACRL+AAKSTLAAR+DSIRGDPTGK GRNL +EI KKIEKWQE          
Sbjct: 285  PPPLRTRACRLIAAKSTLAARIDSIRGDPTGKAGRNLLEEIRKKIEKWQEPPPAKLPKPL 344

Query: 1069 XXXDSEPXXXXXXXXXXXXXXXYAVTDMRKLANRMQFGIPEESSXXXXXXXXXXXXXXXX 1248
               DSEP               YA TDM KLANRMQFGIPEESS                
Sbjct: 345  PVPDSEPKKKRGGRRLRKMKERYAQTDMMKLANRMQFGIPEESSLGDGLGEGYGMLGQAG 404

Query: 1249 SGKLRVSIGQSRLAAKVAXXXXXXXXXXXXXXXXXXXXXXFTPVQGIELSNPQALANQLG 1428
            SGKLRVS GQS+LAAKVA                      FTPVQGIELSNPQ   N LG
Sbjct: 405  SGKLRVSAGQSKLAAKVAKKFKEKSYGSSGATSGLTSSLAFTPVQGIELSNPQVQGNLLG 464

Query: 1429 SGTQSTYFSEIGTFSKIKKT 1488
             GTQSTYFSE GTFSKI++T
Sbjct: 465  GGTQSTYFSETGTFSKIRRT 484