BLASTX nr result

ID: Coptis21_contig00010328 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010328
         (209 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEV57468.1| pathogensis-related protein 1a, partial [Prunus p...    84   9e-15
gb|AFK93503.1| pathogenesis related protein 1 isoform 4 [Ficus p...    82   4e-14
ref|XP_002270281.2| PREDICTED: LOW QUALITY PROTEIN: basic form o...    82   4e-14
ref|XP_002270128.1| PREDICTED: basic form of pathogenesis-relate...    82   4e-14
gb|AEM36335.1| pathogenesis-related protein [Vitis quinquangularis]    81   8e-14

>gb|AEV57468.1| pathogensis-related protein 1a, partial [Prunus persica]
          Length = 161

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 38/68 (55%), Positives = 46/68 (67%)
 Frame = -2

Query: 205 LCLVGLTVLNVSQAQDSPQDYLSAHTAARAEVGVEPMTWDDGVXXXXXXXXXQMASSCNL 26
           +CL+GL +L  + AQDSPQDYL+AH AARA+VGV P+TWD  +           A  CNL
Sbjct: 11  VCLIGLALLQSTGAQDSPQDYLNAHNAARAQVGVAPLTWDPNLVAYAQRYANSRAGDCNL 70

Query: 25  VHSGGPYG 2
           VHS GPYG
Sbjct: 71  VHSNGPYG 78


>gb|AFK93503.1| pathogenesis related protein 1 isoform 4 [Ficus pumila var.
           awkeotsang]
          Length = 169

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 36/69 (52%), Positives = 46/69 (66%)
 Frame = -2

Query: 208 LLCLVGLTVLNVSQAQDSPQDYLSAHTAARAEVGVEPMTWDDGVXXXXXXXXXQMASSCN 29
           ++C++GL VL   +AQDSPQD+L+ H  ARAEVGV PMTWD+ V         +    C 
Sbjct: 11  IMCILGLAVLESCRAQDSPQDFLAPHNRARAEVGVGPMTWDESVAAYARDYANRRKGDCK 70

Query: 28  LVHSGGPYG 2
           L+HSGGPYG
Sbjct: 71  LIHSGGPYG 79


>ref|XP_002270281.2| PREDICTED: LOW QUALITY PROTEIN: basic form of pathogenesis-related
           protein 1 [Vitis vinifera]
          Length = 167

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 39/70 (55%), Positives = 50/70 (71%), Gaps = 1/70 (1%)
 Frame = -2

Query: 208 LLCLVGLTVLNVSQAQDSPQDYLSAHTAARAEVGVEPMTWDDGV-XXXXXXXXXQMASSC 32
           LLCL+GL + ++S AQ++PQDYL+AH AARAEVGV+PMTWD  +          ++   C
Sbjct: 8   LLCLLGLALAHLSHAQNTPQDYLTAHNAARAEVGVQPMTWDKKLANYASQYVSEKLIGDC 67

Query: 31  NLVHSGGPYG 2
           NL HSGGPYG
Sbjct: 68  NLEHSGGPYG 77


>ref|XP_002270128.1| PREDICTED: basic form of pathogenesis-related protein 1 [Vitis
           vinifera] gi|147832825|emb|CAN61902.1| hypothetical
           protein VITISV_012766 [Vitis vinifera]
          Length = 167

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 39/70 (55%), Positives = 50/70 (71%), Gaps = 1/70 (1%)
 Frame = -2

Query: 208 LLCLVGLTVLNVSQAQDSPQDYLSAHTAARAEVGVEPMTWDDGV-XXXXXXXXXQMASSC 32
           LLCL+GL + ++S AQ++PQDYL+AH AARAEVGV+PMTWD  +          ++   C
Sbjct: 8   LLCLLGLALAHLSHAQNTPQDYLTAHNAARAEVGVQPMTWDKKLANYASQYVSEKLIGDC 67

Query: 31  NLVHSGGPYG 2
           NL HSGGPYG
Sbjct: 68  NLEHSGGPYG 77


>gb|AEM36335.1| pathogenesis-related protein [Vitis quinquangularis]
          Length = 160

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 38/69 (55%), Positives = 47/69 (68%)
 Frame = -2

Query: 208 LLCLVGLTVLNVSQAQDSPQDYLSAHTAARAEVGVEPMTWDDGVXXXXXXXXXQMASSCN 29
           LLC +GL + ++  AQ+SPQDYL+AH  ARA+VGV PM+WD+ V         Q    CN
Sbjct: 10  LLCFMGLALAHICCAQNSPQDYLNAHNTARAQVGVGPMSWDNTVAAYAQNYAKQRIGDCN 69

Query: 28  LVHSGGPYG 2
           LVHSGGPYG
Sbjct: 70  LVHSGGPYG 78


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