BLASTX nr result

ID: Coptis21_contig00010308 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010308
         (712 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305484.1| predicted protein [Populus trichocarpa] gi|2...   132   7e-29
ref|XP_003522758.1| PREDICTED: uncharacterized protein LOC100793...   130   3e-28
ref|NP_001240932.1| uncharacterized protein LOC100813444 [Glycin...   122   9e-26
ref|XP_004144833.1| PREDICTED: uncharacterized protein LOC101205...   117   2e-24
ref|XP_002529252.1| conserved hypothetical protein [Ricinus comm...   116   5e-24

>ref|XP_002305484.1| predicted protein [Populus trichocarpa] gi|222848448|gb|EEE85995.1|
           predicted protein [Populus trichocarpa]
          Length = 129

 Score =  132 bits (332), Expect = 7e-29
 Identities = 61/123 (49%), Positives = 81/123 (65%)
 Frame = -2

Query: 591 RTQSSSIFDVFSLNPLPYPVXXXXXXXXXXLGTSYYFNYESVVEATEENFSLVLKATPVV 412
           R +S SIFD F+LNPLPYPV          LG S++F+YE +VE TEE    +L   P+V
Sbjct: 5   RRRSDSIFDAFTLNPLPYPVLLILAVLSIFLGMSWFFSYEDMVETTEEQMGWILLVVPLV 64

Query: 411 LLILVRWLSSMDSPGWLFARSPYDRQRATHHHPPEGTSPWGXXXXXXXXXXXVSYQSSFL 232
           L+++VRWLSSM++P  +F  SP+D++R THH P EG+SPWG           V +QS+FL
Sbjct: 65  LIVIVRWLSSMENPDMIFVMSPWDKRRRTHHRPSEGSSPWGVAAFIVLLLVLVKFQSTFL 124

Query: 231 DSW 223
           DSW
Sbjct: 125 DSW 127


>ref|XP_003522758.1| PREDICTED: uncharacterized protein LOC100793388 [Glycine max]
          Length = 130

 Score =  130 bits (326), Expect = 3e-28
 Identities = 65/130 (50%), Positives = 85/130 (65%), Gaps = 1/130 (0%)
 Frame = -2

Query: 606 MAYGSRTQSSSIFDVFSLNPLPYPVXXXXXXXXXXLGTSYYFNYESVVEATEENFSLVLK 427
           M YG R+++SS+ D FSLNP+PYPV          LG S+Y +YE VVEA EE    +L 
Sbjct: 1   MGYG-RSRASSVLDGFSLNPVPYPVLLILSLILLFLGISWYLSYEEVVEAAEEQLGWMLL 59

Query: 426 ATPVVLLILVRWLSSMDSPGWLFAR-SPYDRQRATHHHPPEGTSPWGXXXXXXXXXXXVS 250
           ATPVVL+++VRWLSS+D+  W F   SP++R+R THH P EG+SPWG           + 
Sbjct: 60  ATPVVLILVVRWLSSVDTSEWFFFNSSPWERRRRTHHFPSEGSSPWGVAALILLVLVLLH 119

Query: 249 YQSSFLDSWF 220
           Y S+FLD+WF
Sbjct: 120 YHSTFLDAWF 129


>ref|NP_001240932.1| uncharacterized protein LOC100813444 [Glycine max]
           gi|255638336|gb|ACU19480.1| unknown [Glycine max]
          Length = 130

 Score =  122 bits (305), Expect = 9e-26
 Identities = 64/130 (49%), Positives = 83/130 (63%), Gaps = 1/130 (0%)
 Frame = -2

Query: 606 MAYGSRTQSSSIFDVFSLNPLPYPVXXXXXXXXXXLGTSYYFNYESVVEATEENFSLVLK 427
           MAYG R+++SS+ D F+LNPLPYPV          LG S+YF+YE VVE  E+    +L 
Sbjct: 1   MAYG-RSRASSVLDGFTLNPLPYPVLLILSLIFIFLGVSWYFSYEEVVETAEQQLGWLLF 59

Query: 426 ATPVVLLILVRWLSSMDSPGWLFARS-PYDRQRATHHHPPEGTSPWGXXXXXXXXXXXVS 250
            TPVVL+++VRWLSSM++  W F+ S P +R+  TH    EG+SPWG           V 
Sbjct: 60  CTPVVLILIVRWLSSMENSYWFFSASLPGERRGRTHQGLSEGSSPWGVAALILVLLIMVQ 119

Query: 249 YQSSFLDSWF 220
           YQS+FLDSWF
Sbjct: 120 YQSNFLDSWF 129


>ref|XP_004144833.1| PREDICTED: uncharacterized protein LOC101205041 [Cucumis sativus]
           gi|449507011|ref|XP_004162909.1| PREDICTED:
           uncharacterized LOC101205041 [Cucumis sativus]
          Length = 129

 Score =  117 bits (293), Expect = 2e-24
 Identities = 60/129 (46%), Positives = 82/129 (63%)
 Frame = -2

Query: 609 LMAYGSRTQSSSIFDVFSLNPLPYPVXXXXXXXXXXLGTSYYFNYESVVEATEENFSLVL 430
           + +Y +RT + SI D  SLNP PYPV          LG S++ +YES VEA E++ + +L
Sbjct: 1   MTSYRNRTTADSILDSLSLNPPPYPVLLLLAVVSIFLGASWWLSYESAVEAAEDHINWIL 60

Query: 429 KATPVVLLILVRWLSSMDSPGWLFARSPYDRQRATHHHPPEGTSPWGXXXXXXXXXXXVS 250
            ATPV+L++LVR+LSS+D     F+ SP+DR+R THH P EGTSPWG           + 
Sbjct: 61  FATPVLLILLVRFLSSLDPT--FFSSSPWDRRRRTHHIPAEGTSPWGVAAFILLLLVLLQ 118

Query: 249 YQSSFLDSW 223
           +QSSF +SW
Sbjct: 119 FQSSFRESW 127


>ref|XP_002529252.1| conserved hypothetical protein [Ricinus communis]
           gi|223531288|gb|EEF33130.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 110

 Score =  116 bits (290), Expect = 5e-24
 Identities = 57/99 (57%), Positives = 72/99 (72%)
 Frame = -2

Query: 600 YGSRTQSSSIFDVFSLNPLPYPVXXXXXXXXXXLGTSYYFNYESVVEATEENFSLVLKAT 421
           YG R  ++SIFDVF+LNPLPYPV          LG S+YF+YE +VEA EE  S VL   
Sbjct: 6   YGRR--NNSIFDVFTLNPLPYPVLLILAVISIFLGMSWYFSYEEMVEAAEEQMSWVLLII 63

Query: 420 PVVLLILVRWLSSMDSPGWLFARSPYDRQRATHHHPPEG 304
           P+V+L +VRWLSSM++P  LFA+SP++ +R THHHPPEG
Sbjct: 64  PLVILFVVRWLSSMENPDMLFAKSPWEWKRQTHHHPPEG 102


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