BLASTX nr result

ID: Coptis21_contig00010307 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010307
         (752 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280178.1| PREDICTED: cyclin-D1-binding protein 1 homol...   110   4e-22
emb|CAN69812.1| hypothetical protein VITISV_043108 [Vitis vinifera]   110   4e-22
ref|XP_004135072.1| PREDICTED: cyclin-D1-binding protein 1 homol...   109   7e-22
ref|XP_002314827.1| predicted protein [Populus trichocarpa] gi|2...   101   1e-19
ref|XP_002532234.1| conserved hypothetical protein [Ricinus comm...    96   8e-18

>ref|XP_002280178.1| PREDICTED: cyclin-D1-binding protein 1 homolog [Vitis vinifera]
           gi|297737743|emb|CBI26944.3| unnamed protein product
           [Vitis vinifera]
          Length = 364

 Score =  110 bits (274), Expect = 4e-22
 Identities = 64/139 (46%), Positives = 90/139 (64%)
 Frame = +2

Query: 86  MIIAQSAVSFVSDILVIIKELVRFITRLLKCPDHIESCQSVNSLERLLGLSQCIVAEVDN 265
           M IA S +S V++IL +IKEL+R IT L+K  D  +S   V+SLE+LL L Q I  +VD 
Sbjct: 226 MKIAVSVISVVTEILAVIKELIRCITGLVKQEDANKSSNFVDSLEKLLKLCQGIGVQVDE 285

Query: 266 LGACLYPPQELTSIKVASDNISSAVNGMKAEALSLLDVSLDRFSHACEDFGKSLRKLQSE 445
           LGACLYPPQE+ ++K A++ IS +V+ ++AE +  L  + + F  AC     SL +L S 
Sbjct: 286 LGACLYPPQEIPAMKAAAEKISGSVDEIQAE-IENLGGTTETFIQACNVLRSSLGQLNSL 344

Query: 446 LGSPDATELVPGMQNLTVS 502
           +G     +LVP MQNL V+
Sbjct: 345 VGDSSTADLVPEMQNLAVT 363


>emb|CAN69812.1| hypothetical protein VITISV_043108 [Vitis vinifera]
          Length = 355

 Score =  110 bits (274), Expect = 4e-22
 Identities = 64/139 (46%), Positives = 90/139 (64%)
 Frame = +2

Query: 86  MIIAQSAVSFVSDILVIIKELVRFITRLLKCPDHIESCQSVNSLERLLGLSQCIVAEVDN 265
           M IA S +S V++IL +IKEL+R IT L+K  D  +S   V+SLE+LL L Q I  +VD 
Sbjct: 217 MKIAVSVISVVTEILAVIKELIRCITGLVKQEDANKSSNFVDSLEKLLKLCQGIGVQVDE 276

Query: 266 LGACLYPPQELTSIKVASDNISSAVNGMKAEALSLLDVSLDRFSHACEDFGKSLRKLQSE 445
           LGACLYPPQE+ ++K A++ IS +V+ ++AE +  L  + + F  AC     SL +L S 
Sbjct: 277 LGACLYPPQEIPAMKAAAEKISGSVDEIQAE-IENLGGTTETFIQACNVLRSSLGQLNSL 335

Query: 446 LGSPDATELVPGMQNLTVS 502
           +G     +LVP MQNL V+
Sbjct: 336 VGDSSTADLVPEMQNLAVT 354


>ref|XP_004135072.1| PREDICTED: cyclin-D1-binding protein 1 homolog [Cucumis sativus]
           gi|449493432|ref|XP_004159287.1| PREDICTED:
           cyclin-D1-binding protein 1 homolog [Cucumis sativus]
          Length = 364

 Score =  109 bits (272), Expect = 7e-22
 Identities = 66/139 (47%), Positives = 93/139 (66%)
 Frame = +2

Query: 86  MIIAQSAVSFVSDILVIIKELVRFITRLLKCPDHIESCQSVNSLERLLGLSQCIVAEVDN 265
           M +AQSA+  VS IL++IKEL+R IT LLK  ++     ++ SLE LL L Q I  +VD 
Sbjct: 227 MRVAQSAIHVVSSILLVIKELIRSITSLLKL-ENANKESNLASLENLLKLCQGIGLQVDE 285

Query: 266 LGACLYPPQELTSIKVASDNISSAVNGMKAEALSLLDVSLDRFSHACEDFGKSLRKLQSE 445
           LGACLYPPQE  +IKVAS+ ISS ++ M+ E L  L+ + + F  AC +   SL++L++E
Sbjct: 286 LGACLYPPQEGPAIKVASEKISSFLDNMQTE-LGSLNGNSEGFLQACNNLRDSLKQLETE 344

Query: 446 LGSPDATELVPGMQNLTVS 502
           LG   + +L   MQN+T+S
Sbjct: 345 LGGFSSPDLETRMQNVTLS 363


>ref|XP_002314827.1| predicted protein [Populus trichocarpa] gi|222863867|gb|EEF00998.1|
           predicted protein [Populus trichocarpa]
          Length = 304

 Score =  101 bits (252), Expect = 1e-19
 Identities = 58/138 (42%), Positives = 89/138 (64%)
 Frame = +2

Query: 86  MIIAQSAVSFVSDILVIIKELVRFITRLLKCPDHIESCQSVNSLERLLGLSQCIVAEVDN 265
           M +AQSA+  VS+ +V+IKEL+R IT LLK     +S   V++LE+LL L Q I  ++D 
Sbjct: 168 MKVAQSAIGVVSETVVVIKELIRTITGLLKQEKPEDSGNFVDTLEKLLKLCQEIGVQIDE 227

Query: 266 LGACLYPPQELTSIKVASDNISSAVNGMKAEALSLLDVSLDRFSHACEDFGKSLRKLQSE 445
           LGACLYPPQE  ++K A + ISSA++ ++ E  SL   S +    AC D  +SL+++++ 
Sbjct: 228 LGACLYPPQEFPAMKAAFEKISSAIDKVQTEIESLTS-SSEAVFQACNDLKRSLKQMEAT 286

Query: 446 LGSPDATELVPGMQNLTV 499
           LG    +++   MQN+ +
Sbjct: 287 LGCCSTSDIEFIMQNVAL 304


>ref|XP_002532234.1| conserved hypothetical protein [Ricinus communis]
           gi|223528091|gb|EEF30165.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 364

 Score = 95.9 bits (237), Expect = 8e-18
 Identities = 58/142 (40%), Positives = 87/142 (61%), Gaps = 3/142 (2%)
 Frame = +2

Query: 86  MIIAQSAVSFVSDILVIIKELVRFITRLLKCPDHIESCQSVNSLERLLGLSQCIVAEVDN 265
           M + QSA   VS+ + +IKEL+R IT LLK     ++   V+SLE+LL LSQ IV ++D 
Sbjct: 226 MKVVQSATGVVSETVAVIKELIRTITGLLKQEKPNDTGDFVDSLEKLLKLSQEIVKQIDE 285

Query: 266 LGACLYPPQELTSIKVASDNISSAVNGMKAEALSLLD---VSLDRFSHACEDFGKSLRKL 436
           LGACLYPPQEL +IK A  NI+S ++    + LS+++      + F  AC     S++++
Sbjct: 286 LGACLYPPQELPAIKAALKNITSIID----QVLSIVESFKSCPETFFQACNGLRGSIKQM 341

Query: 437 QSELGSPDATELVPGMQNLTVS 502
           + EL     TE+   MQ++ +S
Sbjct: 342 ELELDGACTTEIEAKMQDVALS 363


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